RNA–Protein interactions for RNA: ENST00000492395.5

ZSWIM8-212, Transcript of zinc finger SWIM-type containing 8, humanhuman

TSL 1 (best)

Gene ZSWIM8, Length 4,490 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM8-212ENST00000492395 NISCHQ9Y2I1 1504 aa23.81■■□□□ 1.4
ZSWIM8-212ENST00000492395 DCAF8L2P0C7V8 631 aa22.31■■□□□ 1.16
ZSWIM8-212ENST00000492395 SHROOM4Q9ULL8 1493 aa21.48■■□□□ 1.03
ZSWIM8-212ENST00000492395 SUPT5HO00267 1087 aaKnown RBP21.26■□□□□ 0.99
ZSWIM8-212ENST00000492395 ABCC9O60706 1549 aa20.15■□□□□ 0.82
ZSWIM8-212ENST00000492395 EHMT2Q96KQ7 1210 aa20.11■□□□□ 0.81
ZSWIM8-212ENST00000492395 CCDC180Q9P1Z9 1646 aa19.9■□□□□ 0.78
ZSWIM8-212ENST00000492395 FAM9AQ8IZU1 332 aaPredicted RBP19.89■□□□□ 0.77
ZSWIM8-212ENST00000492395 ZCCHC6Q5VYS8 1495 aaKnown RBP19.84■□□□□ 0.77
ZSWIM8-212ENST00000492395 TRIM41Q8WV44 630 aa19.7■□□□□ 0.74
ZSWIM8-212ENST00000492395 PCGF6Q9BYE7 350 aa19.63■□□□□ 0.73
ZSWIM8-212ENST00000492395 PABPN1Q86U42 306 aaKnown RBP eCLIP19.63■□□□□ 0.731e-6■■■■□ 24.5
ZSWIM8-212ENST00000492395 CHIC1Q5VXU3 224 aa19.53■□□□□ 0.72
ZSWIM8-212ENST00000492395 SCRIBQ14160 1630 aa19.44■□□□□ 0.7
ZSWIM8-212ENST00000492395 TTBK1Q5TCY1 1321 aaPredicted RBP19.32■□□□□ 0.68
ZSWIM8-212ENST00000492395 RANGAP1P46060 587 aaPredicted RBP19.3■□□□□ 0.68
ZSWIM8-212ENST00000492395 LOC105371045A0A1W2PR82 267 aa19.29■□□□□ 0.68
ZSWIM8-212ENST00000492395 UBTFP17480 764 aaKnown RBP19.19■□□□□ 0.66
ZSWIM8-212ENST00000492395 APLP2Q06481 763 aa19.17■□□□□ 0.66
ZSWIM8-212ENST00000492395 DCAF1Q9Y4B6 1507 aa19.04■□□□□ 0.64
ZSWIM8-212ENST00000492395 PPARGC1BQ86YN6 1023 aaKnown RBP19.04■□□□□ 0.64
ZSWIM8-212ENST00000492395 RB1CC1Q8TDY2 1594 aa19.02■□□□□ 0.64
ZSWIM8-212ENST00000492395 NACADO15069 1562 aa19.01■□□□□ 0.63
ZSWIM8-212ENST00000492395 ZEB1P37275 1124 aaPredicted RBP18.96■□□□□ 0.63
ZSWIM8-212ENST00000492395 CCER1Q8TC90 406 aaPredicted RBP18.95■□□□□ 0.62
ZSWIM8-212ENST00000492395 RSF1Q96T23 1441 aaPredicted RBP18.88■□□□□ 0.61
ZSWIM8-212ENST00000492395 ATP1B4Q9UN42 357 aaPredicted RBP18.85■□□□□ 0.61
ZSWIM8-212ENST00000492395 PELP1Q8IZL8 1130 aaKnown RBP18.83■□□□□ 0.6
ZSWIM8-212ENST00000492395 HRCP23327 699 aa18.82■□□□□ 0.6
ZSWIM8-212ENST00000492395 TRIM26Q12899 539 aaPredicted RBP18.77■□□□□ 0.6
ZSWIM8-212ENST00000492395 CECR2Q9BXF3 1484 aa18.76■□□□□ 0.59
ZSWIM8-212ENST00000492395 CENPBP07199 599 aaPredicted RBP18.73■□□□□ 0.59
ZSWIM8-212ENST00000492395 MYO15BQ96JP2 1530 aa18.58■□□□□ 0.57
ZSWIM8-212ENST00000492395 MROH2BQ7Z745 1585 aa18.52■□□□□ 0.56
ZSWIM8-212ENST00000492395 YTHDC1Q96MU7 727 aaKnown RBP18.51■□□□□ 0.55
ZSWIM8-212ENST00000492395 CSRNP3Q8WYN3 585 aa18.51■□□□□ 0.55
ZSWIM8-212ENST00000492395 BAZ1AQ9NRL2 1556 aaPredicted RBP18.51■□□□□ 0.55
ZSWIM8-212ENST00000492395 ITGAEP38570 1179 aa18.41■□□□□ 0.54
ZSWIM8-212ENST00000492395 HNRNPUL2Q1KMD3 747 aaKnown RBP18.41■□□□□ 0.54
ZSWIM8-212ENST00000492395 BAZ1BQ9UIG0 1483 aaKnown RBP18.38■□□□□ 0.53
ZSWIM8-212ENST00000492395 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.29■□□□□ 0.52
ZSWIM8-212ENST00000492395 WIZO95785 1651 aa18.29■□□□□ 0.52
ZSWIM8-212ENST00000492395 P3H3Q8IVL6 736 aa18.22■□□□□ 0.51
ZSWIM8-212ENST00000492395 CCDC88BA6NC98 1476 aa18.21■□□□□ 0.51
ZSWIM8-212ENST00000492395 WRNQ14191 1432 aaPredicted RBP eCLIP18.2■□□□□ 0.53e-7■■■■□ 25.1
ZSWIM8-212ENST00000492395 FBLN2P98095 1184 aa18.17■□□□□ 0.5
ZSWIM8-212ENST00000492395 MYT1LQ9UL68 1186 aa18.16■□□□□ 0.5
ZSWIM8-212ENST00000492395 NEFLP07196 543 aa18.11■□□□□ 0.49
ZSWIM8-212ENST00000492395 SMARCA4P51532 1647 aa18.09■□□□□ 0.49
ZSWIM8-212ENST00000492395 ABCC8Q09428 1581 aa18.09■□□□□ 0.49
ZSWIM8-212ENST00000492395 FAM50AQ14320 339 aaKnown RBP18.07■□□□□ 0.48
ZSWIM8-212ENST00000492395 ERICH6Q7L0X2 663 aa18.07■□□□□ 0.48
ZSWIM8-212ENST00000492395 TOP2AP11388 1531 aaKnown RBP18.07■□□□□ 0.48
ZSWIM8-212ENST00000492395 DIEXFQ68CQ4 756 aaKnown RBP18.06■□□□□ 0.48
ZSWIM8-212ENST00000492395 SMARCA2P51531 1590 aa18.04■□□□□ 0.48
ZSWIM8-212ENST00000492395 ARID3CA6NKF2 412 aa18.03■□□□□ 0.48
ZSWIM8-212ENST00000492395 SOGA1O94964 1423 aa18.03■□□□□ 0.48
ZSWIM8-212ENST00000492395 ATAD2BQ9ULI0 1458 aa18.02■□□□□ 0.48
ZSWIM8-212ENST00000492395 MYT1Q01538 1121 aa17.99■□□□□ 0.47
ZSWIM8-212ENST00000492395 EEA1Q15075 1411 aa17.97■□□□□ 0.47
ZSWIM8-212ENST00000492395 CEP162Q5TB80 1403 aa17.94■□□□□ 0.46
ZSWIM8-212ENST00000492395 CLIP1P30622 1438 aa17.93■□□□□ 0.46
ZSWIM8-212ENST00000492395 GOLGA3Q08378 1498 aa17.92■□□□□ 0.46
ZSWIM8-212ENST00000492395 KIF27Q86VH2 1401 aa17.87■□□□□ 0.45
ZSWIM8-212ENST00000492395 TNIKQ9UKE5 1360 aa17.84■□□□□ 0.45
ZSWIM8-212ENST00000492395 CEP164Q9UPV0 1460 aa17.82■□□□□ 0.44
ZSWIM8-212ENST00000492395 POLR3GLQ9BT43 218 aa17.8■□□□□ 0.44
ZSWIM8-212ENST00000492395 CNGB1Q14028 1251 aaPredicted RBP17.77■□□□□ 0.44
ZSWIM8-212ENST00000492395 GTF3C3Q9Y5Q9 886 aa17.76■□□□□ 0.43
ZSWIM8-212ENST00000492395 CUX2O14529 1486 aa17.76■□□□□ 0.43
ZSWIM8-212ENST00000492395 NEUROD1Q13562 356 aa17.75■□□□□ 0.43
ZSWIM8-212ENST00000492395 TRIM52Q96A61 297 aa17.74■□□□□ 0.43
ZSWIM8-212ENST00000492395 CADPSQ9ULU8 1353 aa17.74■□□□□ 0.43
ZSWIM8-212ENST00000492395 RUSC2Q8N2Y8 1516 aa17.72■□□□□ 0.43
ZSWIM8-212ENST00000492395 EIF4G1Q04637 1599 aaKnown RBP17.72■□□□□ 0.43
ZSWIM8-212ENST00000492395 BICRAQ9NZM4 1560 aa17.72■□□□□ 0.43
ZSWIM8-212ENST00000492395 CHMP7Q8WUX9 453 aaPredicted RBP17.7■□□□□ 0.42
ZSWIM8-212ENST00000492395 ZNF316A6NFI3 1004 aaPredicted RBP17.67■□□□□ 0.42
ZSWIM8-212ENST00000492395 CARMIL1Q5VZK9 1371 aa17.66■□□□□ 0.42
ZSWIM8-212ENST00000492395 ZNF777Q9ULD5 760 aaPredicted RBP17.64■□□□□ 0.42
ZSWIM8-212ENST00000492395 ERCC6Q03468 1493 aa17.64■□□□□ 0.42
ZSWIM8-212ENST00000492395 NCAPD3P42695 1498 aa17.64■□□□□ 0.41
ZSWIM8-212ENST00000492395 TDRD9Q8NDG6 1382 aaKnown RBP17.61■□□□□ 0.41
ZSWIM8-212ENST00000492395 CDK11AQ9UQ88 783 aaPredicted RBP17.59■□□□□ 0.41
ZSWIM8-212ENST00000492395 PDS5BQ9NTI5 1447 aa17.59■□□□□ 0.41
ZSWIM8-212ENST00000492395 MTUS2Q5JR59 1369 aa17.58■□□□□ 0.4
ZSWIM8-212ENST00000492395 ACIN1Q9UKV3 1341 aaKnown RBP17.58■□□□□ 0.4
ZSWIM8-212ENST00000492395 UNC13AQ9UPW8 1703 aa17.56■□□□□ 0.4
ZSWIM8-212ENST00000492395 RAPGEF2Q9Y4G8 1499 aa17.54■□□□□ 0.4
ZSWIM8-212ENST00000492395 CHIC2Q9UKJ5 165 aa17.53■□□□□ 0.4
ZSWIM8-212ENST00000492395 FANCD2Q9BXW9 1451 aa17.52■□□□□ 0.4
ZSWIM8-212ENST00000492395 BCANQ96GW7 911 aa17.51■□□□□ 0.39
ZSWIM8-212ENST00000492395 VPS8Q8N3P4 1428 aa17.47■□□□□ 0.39
ZSWIM8-212ENST00000492395 ZNF326Q5BKZ1 582 aaKnown RBP17.45■□□□□ 0.38
ZSWIM8-212ENST00000492395 KANK4Q5T7N3 995 aaPredicted RBP17.44■□□□□ 0.38
ZSWIM8-212ENST00000492395 SLC4A1APQ9BWU0 796 aaKnown RBP17.42■□□□□ 0.38
ZSWIM8-212ENST00000492395 CC2D2AQ9P2K1 1620 aa17.42■□□□□ 0.38
ZSWIM8-212ENST00000492395 ANP32CO43423 234 aa17.41■□□□□ 0.38
ZSWIM8-212ENST00000492395 SYNJ1O43426 1573 aa17.4■□□□□ 0.38
ZSWIM8-212ENST00000492395 CFTRP13569 1480 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms