RNA–Protein interactions for RNA: ENST00000554627.5

MARK3-208, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 2

Gene MARK3, Length 1,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-208ENST00000554627 NISCHQ9Y2I1 1504 aa22.66■■□□□ 1.22
MARK3-208ENST00000554627 CCDC180Q9P1Z9 1646 aa20.12■□□□□ 0.81
MARK3-208ENST00000554627 ABCC9O60706 1549 aa19.08■□□□□ 0.64
MARK3-208ENST00000554627 ZCCHC6Q5VYS8 1495 aaKnown RBP18.98■□□□□ 0.63
MARK3-208ENST00000554627 DCAF1Q9Y4B6 1507 aa18.82■□□□□ 0.6
MARK3-208ENST00000554627 MYO15BQ96JP2 1530 aa18.75■□□□□ 0.59
MARK3-208ENST00000554627 NACADO15069 1562 aa18.73■□□□□ 0.59
MARK3-208ENST00000554627 AEBP2Q6ZN18 517 aaPredicted RBP18.72■□□□□ 0.59
MARK3-208ENST00000554627 RB1CC1Q8TDY2 1594 aa18.66■□□□□ 0.58
MARK3-208ENST00000554627 DCAF8L2P0C7V8 631 aa18.64■□□□□ 0.57
MARK3-208ENST00000554627 UNC13AQ9UPW8 1703 aa18.33■□□□□ 0.53
MARK3-208ENST00000554627 SCRIBQ14160 1630 aa18.28■□□□□ 0.52
MARK3-208ENST00000554627 SHROOM4Q9ULL8 1493 aa18.05■□□□□ 0.48
MARK3-208ENST00000554627 BICRAQ9NZM4 1560 aa18.01■□□□□ 0.47
MARK3-208ENST00000554627 PABPN1Q86U42 306 aaKnown RBP eCLIP17.81■□□□□ 0.44
MARK3-208ENST00000554627 BAZ1AQ9NRL2 1556 aaPredicted RBP17.58■□□□□ 0.41
MARK3-208ENST00000554627 SMARCA4P51532 1647 aa17.55■□□□□ 0.4
MARK3-208ENST00000554627 CHIC1Q5VXU3 224 aa17.54■□□□□ 0.4
MARK3-208ENST00000554627 CECR2Q9BXF3 1484 aa17.53■□□□□ 0.4
MARK3-208ENST00000554627 EIF4G1Q04637 1599 aaKnown RBP17.52■□□□□ 0.4
MARK3-208ENST00000554627 MROH2BQ7Z745 1585 aa17.44■□□□□ 0.38
MARK3-208ENST00000554627 PEG3Q9GZU2 1588 aa17.37■□□□□ 0.37
MARK3-208ENST00000554627 RSF1Q96T23 1441 aaPredicted RBP17.36■□□□□ 0.37
MARK3-208ENST00000554627 CC2D2AQ9P2K1 1620 aa17.36■□□□□ 0.37
MARK3-208ENST00000554627 SMARCA2P51531 1590 aa17.35■□□□□ 0.37
MARK3-208ENST00000554627 WIZO95785 1651 aa17.33■□□□□ 0.37
MARK3-208ENST00000554627 ATAD2BQ9ULI0 1458 aa17.26■□□□□ 0.35
MARK3-208ENST00000554627 HMGXB3Q12766 1538 aa17.24■□□□□ 0.35
MARK3-208ENST00000554627 NCAPD3P42695 1498 aa17.19■□□□□ 0.34
MARK3-208ENST00000554627 BAZ1BQ9UIG0 1483 aaKnown RBP17.19■□□□□ 0.34
MARK3-208ENST00000554627 SUPT5HO00267 1087 aaKnown RBP17.19■□□□□ 0.34
MARK3-208ENST00000554627 TOP2AP11388 1531 aaKnown RBP17.18■□□□□ 0.34
MARK3-208ENST00000554627 DNAJC5BQ9UF47 199 aa16.98■□□□□ 0.31
MARK3-208ENST00000554627 CCDC88BA6NC98 1476 aa16.91■□□□□ 0.3
MARK3-208ENST00000554627 PRDM2Q13029 1718 aa16.88■□□□□ 0.29
MARK3-208ENST00000554627 LAMC3Q9Y6N6 1575 aa16.77■□□□□ 0.28
MARK3-208ENST00000554627 CFTRP13569 1480 aa16.71■□□□□ 0.27
MARK3-208ENST00000554627 CADPSQ9ULU8 1353 aa16.69■□□□□ 0.26
MARK3-208ENST00000554627 NESP48681 1621 aa16.62■□□□□ 0.25
MARK3-208ENST00000554627 KIF21AQ7Z4S6 1674 aa16.59■□□□□ 0.25
MARK3-208ENST00000554627 PDS5BQ9NTI5 1447 aa16.57■□□□□ 0.24
MARK3-208ENST00000554627 FANCD2Q9BXW9 1451 aa16.54■□□□□ 0.24
MARK3-208ENST00000554627 CEP164Q9UPV0 1460 aa16.51■□□□□ 0.23
MARK3-208ENST00000554627 ERCC6Q03468 1493 aa16.47■□□□□ 0.23
MARK3-208ENST00000554627 ABCC8Q09428 1581 aa16.44■□□□□ 0.22
MARK3-208ENST00000554627 BIVM-ERCC5R4GMW8 1640 aa16.43■□□□□ 0.22
MARK3-208ENST00000554627 DNMBPQ6XZF7 1577 aa16.4■□□□□ 0.22
MARK3-208ENST00000554627 WRNQ14191 1432 aaPredicted RBP eCLIP16.4■□□□□ 0.22
MARK3-208ENST00000554627 TOP2BQ02880 1626 aa16.39■□□□□ 0.21
MARK3-208ENST00000554627 THOC2Q8NI27 1593 aaKnown RBP16.39■□□□□ 0.21
MARK3-208ENST00000554627 MRC2Q9UBG0 1479 aa16.39■□□□□ 0.21
MARK3-208ENST00000554627 SYNJ1O43426 1573 aa16.37■□□□□ 0.21
MARK3-208ENST00000554627 CUX1P39880 1505 aa16.35■□□□□ 0.21
MARK3-208ENST00000554627 WDR62O43379 1518 aa16.35■□□□□ 0.21
MARK3-208ENST00000554627 URB2Q14146 1524 aaKnown RBP16.33■□□□□ 0.2
MARK3-208ENST00000554627 TOPBP1Q92547 1522 aa16.33■□□□□ 0.2
MARK3-208ENST00000554627 TRIM41Q8WV44 630 aa16.26■□□□□ 0.19
MARK3-208ENST00000554627 FGD5Q6ZNL6 1462 aa16.23■□□□□ 0.19
MARK3-208ENST00000554627 POLA1P09884 1462 aaPredicted RBP16.21■□□□□ 0.19
MARK3-208ENST00000554627 WDR97A6NE52 1622 aa16.2■□□□□ 0.18
MARK3-208ENST00000554627 CUX2O14529 1486 aa16.16■□□□□ 0.18
MARK3-208ENST00000554627 TARBP1Q13395 1621 aaKnown RBP16.16■□□□□ 0.18
MARK3-208ENST00000554627 IFT140Q96RY7 1462 aa16.14■□□□□ 0.17
MARK3-208ENST00000554627 SOGA1O94964 1423 aa16.12■□□□□ 0.17
MARK3-208ENST00000554627 ABCA10Q8WWZ4 1543 aa16.12■□□□□ 0.17
MARK3-208ENST00000554627 RAD54L2Q9Y4B4 1467 aa16.09■□□□□ 0.17
MARK3-208ENST00000554627 ABCA5Q8WWZ7 1642 aa16.07■□□□□ 0.16
MARK3-208ENST00000554627 PBRM1Q86U86 1689 aa16.06■□□□□ 0.16
MARK3-208ENST00000554627 EEA1Q15075 1411 aa16.05■□□□□ 0.16
MARK3-208ENST00000554627 KIF27Q86VH2 1401 aa16.04■□□□□ 0.16
MARK3-208ENST00000554627 EIF4G3O43432 1585 aaKnown RBP16.04■□□□□ 0.16
MARK3-208ENST00000554627 SENP3Q9H4L4 574 aaPredicted RBP16.03■□□□□ 0.16
MARK3-208ENST00000554627 CUL7Q14999 1698 aa15.98■□□□□ 0.15
MARK3-208ENST00000554627 GAPVD1Q14C86 1478 aa15.98■□□□□ 0.15
MARK3-208ENST00000554627 ERICH3Q5RHP9 1530 aa15.97■□□□□ 0.15
MARK3-208ENST00000554627 ZNF608Q9ULD9 1512 aaPredicted RBP15.96■□□□□ 0.15
MARK3-208ENST00000554627 RUSC2Q8N2Y8 1516 aa15.94■□□□□ 0.14
MARK3-208ENST00000554627 TDRD9Q8NDG6 1382 aaKnown RBP15.93■□□□□ 0.14
MARK3-208ENST00000554627 GRIN2BQ13224 1484 aa15.93■□□□□ 0.14
MARK3-208ENST00000554627 AQRO60306 1485 aaKnown RBP eCLIP15.92■□□□□ 0.145e-8■■■□□ 17.4
MARK3-208ENST00000554627 KIF21BO75037 1637 aa15.89■□□□□ 0.13
MARK3-208ENST00000554627 ADAMTS12P58397 1594 aa15.88■□□□□ 0.13
MARK3-208ENST00000554627 MAGI1Q96QZ7 1491 aaPredicted RBP15.87■□□□□ 0.13
MARK3-208ENST00000554627 FAM9AQ8IZU1 332 aaPredicted RBP15.85■□□□□ 0.13
MARK3-208ENST00000554627 CSRNP3Q8WYN3 585 aa15.85■□□□□ 0.13
MARK3-208ENST00000554627 IGF1RP08069 1367 aa15.84■□□□□ 0.13
MARK3-208ENST00000554627 SNAPC4Q5SXM2 1469 aa15.84■□□□□ 0.13
MARK3-208ENST00000554627 PRXQ9BXM0 1461 aa15.81■□□□□ 0.12
MARK3-208ENST00000554627 CHD1O14646 1710 aa15.81■□□□□ 0.12
MARK3-208ENST00000554627 FHAD1B1AJZ9 1412 aa15.8■□□□□ 0.12
MARK3-208ENST00000554627 RAPGEF2Q9Y4G8 1499 aa15.79■□□□□ 0.12
MARK3-208ENST00000554627 CTTNBP2Q8WZ74 1663 aa15.79■□□□□ 0.12
MARK3-208ENST00000554627 CARMIL1Q5VZK9 1371 aa15.79■□□□□ 0.12
MARK3-208ENST00000554627 SYNJ2O15056 1496 aa15.78■□□□□ 0.12
MARK3-208ENST00000554627 GOLGA3Q08378 1498 aa15.78■□□□□ 0.12
MARK3-208ENST00000554627 PHF23Q9BUL5 403 aaPredicted RBP15.76■□□□□ 0.11
MARK3-208ENST00000554627 POTEDQ86YR6 584 aa15.75■□□□□ 0.11
MARK3-208ENST00000554627 GRIN2AQ12879 1464 aa15.72■□□□□ 0.11
MARK3-208ENST00000554627 CHMP7Q8WUX9 453 aaPredicted RBP15.67■□□□□ 0.1
MARK3-208ENST00000554627 CEP170Q5SW79 1584 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms