RNA–Protein interactions for RNA: ENST00000507026.5

NDUFS4-205, Transcript of NADH:ubiquinone oxidoreductase subunit S4, humanhuman

TSL 3

Gene NDUFS4, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4-205ENST00000507026 CHIC1Q5VXU3 224 aa24.16■■□□□ 1.46
NDUFS4-205ENST00000507026 AEBP2Q6ZN18 517 aaPredicted RBP23.94■■□□□ 1.42
NDUFS4-205ENST00000507026 NISCHQ9Y2I1 1504 aa22.57■■□□□ 1.2
NDUFS4-205ENST00000507026 PHF23Q9BUL5 403 aaPredicted RBP21.45■■□□□ 1.02
NDUFS4-205ENST00000507026 ABCC9O60706 1549 aa20.94■□□□□ 0.94
NDUFS4-205ENST00000507026 CCDC180Q9P1Z9 1646 aa20.38■□□□□ 0.85
NDUFS4-205ENST00000507026 DNAJC5BQ9UF47 199 aa20.12■□□□□ 0.81
NDUFS4-205ENST00000507026 SENP3Q9H4L4 574 aaPredicted RBP20.01■□□□□ 0.79
NDUFS4-205ENST00000507026 PLPPR3Q6T4P5 718 aa19.98■□□□□ 0.79
NDUFS4-205ENST00000507026 RB1CC1Q8TDY2 1594 aa19.64■□□□□ 0.73
NDUFS4-205ENST00000507026 PABPN1Q86U42 306 aaKnown RBP eCLIP19.48■□□□□ 0.71
NDUFS4-205ENST00000507026 NACADO15069 1562 aa19.38■□□□□ 0.69
NDUFS4-205ENST00000507026 DCAF8L2P0C7V8 631 aa19.38■□□□□ 0.69
NDUFS4-205ENST00000507026 UNC13AQ9UPW8 1703 aa19.29■□□□□ 0.68
NDUFS4-205ENST00000507026 BICRAQ9NZM4 1560 aa19.15■□□□□ 0.66
NDUFS4-205ENST00000507026 MYO15BQ96JP2 1530 aa18.91■□□□□ 0.62
NDUFS4-205ENST00000507026 ADRA2BP18089 450 aa18.89■□□□□ 0.61
NDUFS4-205ENST00000507026 CC2D2AQ9P2K1 1620 aa18.86■□□□□ 0.61
NDUFS4-205ENST00000507026 CECR2Q9BXF3 1484 aa18.86■□□□□ 0.61
NDUFS4-205ENST00000507026 DNAJC5Q9H3Z4 198 aa18.71■□□□□ 0.59
NDUFS4-205ENST00000507026 EIF4G1Q04637 1599 aaKnown RBP18.68■□□□□ 0.58
NDUFS4-205ENST00000507026 SHROOM4Q9ULL8 1493 aa18.68■□□□□ 0.58
NDUFS4-205ENST00000507026 PPP6R1Q9UPN7 881 aa18.67■□□□□ 0.58
NDUFS4-205ENST00000507026 SCRIBQ14160 1630 aa18.63■□□□□ 0.57
NDUFS4-205ENST00000507026 ZCCHC6Q5VYS8 1495 aaKnown RBP18.58■□□□□ 0.57
NDUFS4-205ENST00000507026 FOXD1Q16676 465 aa18.58■□□□□ 0.56
NDUFS4-205ENST00000507026 DCAF1Q9Y4B6 1507 aa18.54■□□□□ 0.56
NDUFS4-205ENST00000507026 KCNA4P22459 653 aa18.49■□□□□ 0.55
NDUFS4-205ENST00000507026 EHMT2Q96KQ7 1210 aa18.38■□□□□ 0.53
NDUFS4-205ENST00000507026 CUX2O14529 1486 aa18.13■□□□□ 0.49
NDUFS4-205ENST00000507026 ERCC6Q03468 1493 aa18.06■□□□□ 0.48
NDUFS4-205ENST00000507026 NCAPD3P42695 1498 aa17.92■□□□□ 0.46
NDUFS4-205ENST00000507026 NESP48681 1621 aa17.88■□□□□ 0.45
NDUFS4-205ENST00000507026 ATAD2BQ9ULI0 1458 aa17.84■□□□□ 0.45
NDUFS4-205ENST00000507026 PPP4R3CPQ6ZMV5 832 aa17.81■□□□□ 0.44
NDUFS4-205ENST00000507026 TRIM41Q8WV44 630 aa17.77■□□□□ 0.44
NDUFS4-205ENST00000507026 PIAS4Q8N2W9 510 aaPredicted RBP17.73■□□□□ 0.43
NDUFS4-205ENST00000507026 SLC4A1APQ9BWU0 796 aaKnown RBP17.72■□□□□ 0.43
NDUFS4-205ENST00000507026 HMGXB3Q12766 1538 aa17.72■□□□□ 0.43
NDUFS4-205ENST00000507026 THOC2Q8NI27 1593 aaKnown RBP17.71■□□□□ 0.43
NDUFS4-205ENST00000507026 SMARCA2P51531 1590 aa17.7■□□□□ 0.42
NDUFS4-205ENST00000507026 SMARCA4P51532 1647 aa17.7■□□□□ 0.42
NDUFS4-205ENST00000507026 CSRNP3Q8WYN3 585 aa17.68■□□□□ 0.42
NDUFS4-205ENST00000507026 BAZ1BQ9UIG0 1483 aaKnown RBP17.63■□□□□ 0.41
NDUFS4-205ENST00000507026 KIF21AQ7Z4S6 1674 aa17.61■□□□□ 0.41
NDUFS4-205ENST00000507026 LAMC3Q9Y6N6 1575 aa17.57■□□□□ 0.4
NDUFS4-205ENST00000507026 BAZ1AQ9NRL2 1556 aaPredicted RBP17.51■□□□□ 0.39
NDUFS4-205ENST00000507026 PDS5BQ9NTI5 1447 aa17.5■□□□□ 0.39
NDUFS4-205ENST00000507026 NCBP3Q53F19 620 aaKnown RBP17.5■□□□□ 0.39
NDUFS4-205ENST00000507026 PEG3Q9GZU2 1588 aa17.48■□□□□ 0.39
NDUFS4-205ENST00000507026 MROH2BQ7Z745 1585 aa17.43■□□□□ 0.38
NDUFS4-205ENST00000507026 CADPSQ9ULU8 1353 aa17.39■□□□□ 0.37
NDUFS4-205ENST00000507026 MRC2Q9UBG0 1479 aa17.38■□□□□ 0.37
NDUFS4-205ENST00000507026 NPM3O75607 178 aaKnown RBP17.35■□□□□ 0.37
NDUFS4-205ENST00000507026 WDR62O43379 1518 aa17.34■□□□□ 0.37
NDUFS4-205ENST00000507026 OSCARQ8IYS5 282 aa17.3■□□□□ 0.36
NDUFS4-205ENST00000507026 CEP164Q9UPV0 1460 aa17.23■□□□□ 0.35
NDUFS4-205ENST00000507026 WIZO95785 1651 aa17.22■□□□□ 0.35
NDUFS4-205ENST00000507026 FANCD2Q9BXW9 1451 aa17.19■□□□□ 0.34
NDUFS4-205ENST00000507026 RIMBP3CA6NJZ7 1639 aa17.12■□□□□ 0.33
NDUFS4-205ENST00000507026 RIMBP3BA6NNM3 1639 aa17.12■□□□□ 0.33
NDUFS4-205ENST00000507026 RIMBP3Q9UFD9 1639 aa17.12■□□□□ 0.33
NDUFS4-205ENST00000507026 URB2Q14146 1524 aaKnown RBP17.1■□□□□ 0.33
NDUFS4-205ENST00000507026 CFTRP13569 1480 aa17.07■□□□□ 0.32
NDUFS4-205ENST00000507026 ZBTB22O15209 634 aa17.05■□□□□ 0.32
NDUFS4-205ENST00000507026 CNKSR2Q8WXI2 1034 aa17.03■□□□□ 0.32
NDUFS4-205ENST00000507026 ARHGEF11O15085 1522 aa17.01■□□□□ 0.31
NDUFS4-205ENST00000507026 ZNF608Q9ULD9 1512 aaPredicted RBP16.99■□□□□ 0.31
NDUFS4-205ENST00000507026 CYB5RLQ6IPT4 315 aa16.98■□□□□ 0.31
NDUFS4-205ENST00000507026 TRHP20396 242 aaPredicted RBP16.92■□□□□ 0.3
NDUFS4-205ENST00000507026 SCAF1Q9H7N4 1312 aaKnown RBP16.91■□□□□ 0.3
NDUFS4-205ENST00000507026 RSF1Q96T23 1441 aaPredicted RBP16.89■□□□□ 0.29
NDUFS4-205ENST00000507026 IFT140Q96RY7 1462 aa16.88■□□□□ 0.29
NDUFS4-205ENST00000507026 TOP2AP11388 1531 aaKnown RBP16.88■□□□□ 0.29
NDUFS4-205ENST00000507026 PRDM2Q13029 1718 aa16.87■□□□□ 0.29
NDUFS4-205ENST00000507026 TOPBP1Q92547 1522 aa16.82■□□□□ 0.28
NDUFS4-205ENST00000507026 ARAP1Q96P48 1450 aa16.82■□□□□ 0.28
NDUFS4-205ENST00000507026 CHD1O14646 1710 aa16.82■□□□□ 0.28
NDUFS4-205ENST00000507026 EIF4G3O43432 1585 aaKnown RBP16.81■□□□□ 0.28
NDUFS4-205ENST00000507026 FBLN2P98095 1184 aa16.79■□□□□ 0.28
NDUFS4-205ENST00000507026 AQRO60306 1485 aaKnown RBP eCLIP16.79■□□□□ 0.28
NDUFS4-205ENST00000507026 CCDC88BA6NC98 1476 aa16.76■□□□□ 0.27
NDUFS4-205ENST00000507026 MAPK8IP2Q13387 824 aaPredicted RBP16.75■□□□□ 0.27
NDUFS4-205ENST00000507026 TARBP1Q13395 1621 aaKnown RBP16.7■□□□□ 0.26
NDUFS4-205ENST00000507026 DNMBPQ6XZF7 1577 aa16.68■□□□□ 0.26
NDUFS4-205ENST00000507026 ABCC8Q09428 1581 aa16.68■□□□□ 0.26
NDUFS4-205ENST00000507026 FOXD4L1Q9NU39 408 aa16.64■□□□□ 0.25
NDUFS4-205ENST00000507026 RAD54L2Q9Y4B4 1467 aa16.62■□□□□ 0.25
NDUFS4-205ENST00000507026 MSH5O43196 834 aa16.62■□□□□ 0.25
NDUFS4-205ENST00000507026 TDRD9Q8NDG6 1382 aaKnown RBP16.62■□□□□ 0.25
NDUFS4-205ENST00000507026 POLA1P09884 1462 aaPredicted RBP16.61■□□□□ 0.25
NDUFS4-205ENST00000507026 CLASP1Q7Z460 1538 aa16.56■□□□□ 0.24
NDUFS4-205ENST00000507026 SNAPC4Q5SXM2 1469 aa16.55■□□□□ 0.24
NDUFS4-205ENST00000507026 SOGA1O94964 1423 aa16.55■□□□□ 0.24
NDUFS4-205ENST00000507026 CHMP7Q8WUX9 453 aaPredicted RBP16.54■□□□□ 0.24
NDUFS4-205ENST00000507026 SYNJ1O43426 1573 aa16.49■□□□□ 0.23
NDUFS4-205ENST00000507026 FGD5Q6ZNL6 1462 aa16.46■□□□□ 0.23
NDUFS4-205ENST00000507026 RNF216Q9NWF9 866 aaPredicted RBP16.45■□□□□ 0.22
NDUFS4-205ENST00000507026 GAPVD1Q14C86 1478 aa16.44■□□□□ 0.22
NDUFS4-205ENST00000507026 MAGI1Q96QZ7 1491 aaPredicted RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms