RNA–Protein interactions for RNA: ENST00000467058.1

LRPPRC-207, Transcript of leucine rich pentatricopeptide repeat containing, humanhuman

TSL 3

Gene LRPPRC, Length 557 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPPRC-207ENST00000467058 CHIC1Q5VXU3 224 aa21.28■■□□□ 1
LRPPRC-207ENST00000467058 AEBP2Q6ZN18 517 aaPredicted RBP20.86■□□□□ 0.93
LRPPRC-207ENST00000467058 PHF23Q9BUL5 403 aaPredicted RBP18.83■□□□□ 0.6
LRPPRC-207ENST00000467058 PLPPR3Q6T4P5 718 aa17.66■□□□□ 0.42
LRPPRC-207ENST00000467058 SENP3Q9H4L4 574 aaPredicted RBP17.52■□□□□ 0.4
LRPPRC-207ENST00000467058 ADRA2BP18089 450 aa16.51■□□□□ 0.23
LRPPRC-207ENST00000467058 KCNA4P22459 653 aa16.37■□□□□ 0.21
LRPPRC-207ENST00000467058 EHMT2Q96KQ7 1210 aa16.31■□□□□ 0.2
LRPPRC-207ENST00000467058 FOXD1Q16676 465 aa16.29■□□□□ 0.2
LRPPRC-207ENST00000467058 PPP6R1Q9UPN7 881 aa16.29■□□□□ 0.2
LRPPRC-207ENST00000467058 CSRNP3Q8WYN3 585 aa15.78■□□□□ 0.12
LRPPRC-207ENST00000467058 SLC4A1APQ9BWU0 796 aaKnown RBP15.74■□□□□ 0.11
LRPPRC-207ENST00000467058 PPP4R3CPQ6ZMV5 832 aa15.68■□□□□ 0.1
LRPPRC-207ENST00000467058 NCBP3Q53F19 620 aaKnown RBP15.52■□□□□ 0.08
LRPPRC-207ENST00000467058 PIAS4Q8N2W9 510 aaPredicted RBP15.42■□□□□ 0.06
LRPPRC-207ENST00000467058 NPM3O75607 178 aaKnown RBP15.33■□□□□ 0.04
LRPPRC-207ENST00000467058 MSH5O43196 834 aa15.16■□□□□ 0.02
LRPPRC-207ENST00000467058 ZBTB22O15209 634 aa15.12■□□□□ 0.01
LRPPRC-207ENST00000467058 CNKSR2Q8WXI2 1034 aa15.04■□□□□ -0
LRPPRC-207ENST00000467058 SCAF1Q9H7N4 1312 aaKnown RBP14.89□□□□□ -0.03
LRPPRC-207ENST00000467058 DNAJC5BQ9UF47 199 aa14.88□□□□□ -0.03
LRPPRC-207ENST00000467058 FOXD4L1Q9NU39 408 aa14.81□□□□□ -0.04
LRPPRC-207ENST00000467058 SLC24A1O60721 1099 aa14.65□□□□□ -0.06
LRPPRC-207ENST00000467058 AMER1Q5JTC6 1135 aaPredicted RBP14.56□□□□□ -0.08
LRPPRC-207ENST00000467058 RTN4Q9NQC3 1192 aaKnown RBP14.55□□□□□ -0.08
LRPPRC-207ENST00000467058 POTEDQ86YR6 584 aa14.54□□□□□ -0.08
LRPPRC-207ENST00000467058 RNF216Q9NWF9 866 aaPredicted RBP14.54□□□□□ -0.08
LRPPRC-207ENST00000467058 MAPK8IP2Q13387 824 aaPredicted RBP14.51□□□□□ -0.09
LRPPRC-207ENST00000467058 SLC4A2P04920 1241 aa14.27□□□□□ -0.13
LRPPRC-207ENST00000467058 HOXD11P31277 338 aaPredicted RBP14.25□□□□□ -0.13
LRPPRC-207ENST00000467058 ATXN8OSP0DMR3 200 aa14.24□□□□□ -0.13
LRPPRC-207ENST00000467058 DMRT2Q9Y5R5 561 aa14.16□□□□□ -0.14
LRPPRC-207ENST00000467058 FKBP8Q14318 412 aa14.15□□□□□ -0.14
LRPPRC-207ENST00000467058 MYCNP04198 464 aaPredicted RBP14.13□□□□□ -0.15
LRPPRC-207ENST00000467058 ATF5Q9Y2D1 282 aaPredicted RBP13.68□□□□□ -0.22
LRPPRC-207ENST00000467058 SAMD1Q6SPF0 538 aaPredicted RBP13.56□□□□□ -0.24
LRPPRC-207ENST00000467058 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.55□□□□□ -0.24
LRPPRC-207ENST00000467058 HNRNPUL2Q1KMD3 747 aaKnown RBP13.55□□□□□ -0.24
LRPPRC-207ENST00000467058 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.49□□□□□ -0.253e-8■■■□□ 16
LRPPRC-207ENST00000467058 DCAF8L1A6NGE4 600 aa13.46□□□□□ -0.25
LRPPRC-207ENST00000467058 U3KPZ7 1027 aaPredicted RBP13.44□□□□□ -0.26
LRPPRC-207ENST00000467058 FBXO3Q9UK99 471 aa13.41□□□□□ -0.26
LRPPRC-207ENST00000467058 PLCB2Q00722 1185 aa13.4□□□□□ -0.26
LRPPRC-207ENST00000467058 ZNF219Q9P2Y4 722 aaPredicted RBP13.35□□□□□ -0.27
LRPPRC-207ENST00000467058 PROM2Q8N271 834 aa13.3□□□□□ -0.28
LRPPRC-207ENST00000467058 SPDYE4A6NLX3 237 aa13.27□□□□□ -0.29
LRPPRC-207ENST00000467058 VASPP50552 380 aaPredicted RBP13.22□□□□□ -0.29
LRPPRC-207ENST00000467058 APLP2Q06481 763 aa13.18□□□□□ -0.3
LRPPRC-207ENST00000467058 MKRN4PQ13434 485 aaPredicted RBP13.17□□□□□ -0.3
LRPPRC-207ENST00000467058 HAP1P54257 671 aaPredicted RBP13.13□□□□□ -0.31
LRPPRC-207ENST00000467058 IFNLR1Q8IU57 520 aaPredicted RBP13.12□□□□□ -0.31
LRPPRC-207ENST00000467058 BCANQ96GW7 911 aa13.08□□□□□ -0.32
LRPPRC-207ENST00000467058 PKD2Q13563 968 aa13.06□□□□□ -0.32
LRPPRC-207ENST00000467058 VSIG10Q8N0Z9 540 aa13.05□□□□□ -0.32
LRPPRC-207ENST00000467058 DCAF8L2P0C7V8 631 aa13□□□□□ -0.33
LRPPRC-207ENST00000467058 FBLN2P98095 1184 aa13□□□□□ -0.33
LRPPRC-207ENST00000467058 CACNB1Q02641 598 aaPredicted RBP12.98□□□□□ -0.33
LRPPRC-207ENST00000467058 TAOK2Q9UL54 1235 aa12.95□□□□□ -0.34
LRPPRC-207ENST00000467058 RNF39Q9H2S5 420 aa12.94□□□□□ -0.34
LRPPRC-207ENST00000467058 PRKCSHP14314 528 aaPredicted RBP12.93□□□□□ -0.34
LRPPRC-207ENST00000467058 BBXQ8WY36 941 aaPredicted RBP12.86□□□□□ -0.35
LRPPRC-207ENST00000467058 POLA2Q14181 598 aa12.82□□□□□ -0.36
LRPPRC-207ENST00000467058 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.82□□□□□ -0.36
LRPPRC-207ENST00000467058 KDM2AQ9Y2K7 1162 aa12.82□□□□□ -0.36
LRPPRC-207ENST00000467058 SPOCK2Q92563 424 aa12.78□□□□□ -0.36
LRPPRC-207ENST00000467058 NPM1P06748 294 aaKnown RBP eCLIP12.77□□□□□ -0.37
LRPPRC-207ENST00000467058 TRHP20396 242 aaPredicted RBP12.77□□□□□ -0.37
LRPPRC-207ENST00000467058 SPINK5Q9NQ38 1064 aaPredicted RBP12.76□□□□□ -0.37
LRPPRC-207ENST00000467058 C1QBPQ07021 282 aaKnown RBP12.75□□□□□ -0.37
LRPPRC-207ENST00000467058 ECM2O94769 699 aaPredicted RBP12.74□□□□□ -0.37
LRPPRC-207ENST00000467058 PAXIP1Q6ZW49 1069 aaPredicted RBP12.72□□□□□ -0.37
LRPPRC-207ENST00000467058 TPRNQ4KMQ1 711 aa12.7□□□□□ -0.38
LRPPRC-207ENST00000467058 ZBTB12Q9Y330 459 aaPredicted RBP12.7□□□□□ -0.38
LRPPRC-207ENST00000467058 KLHL34Q8N239 644 aa12.69□□□□□ -0.38
LRPPRC-207ENST00000467058 CFAP44Q96MT7 982 aa12.65□□□□□ -0.38
LRPPRC-207ENST00000467058 STAG3Q9UJ98 1225 aa12.65□□□□□ -0.38
LRPPRC-207ENST00000467058 RGL2O15211 777 aa12.62□□□□□ -0.39
LRPPRC-207ENST00000467058 CAPN15O75808 1086 aa12.61□□□□□ -0.39
LRPPRC-207ENST00000467058 SPRYD3Q8NCJ5 442 aa12.61□□□□□ -0.39
LRPPRC-207ENST00000467058 TSHZ2Q9NRE2 1034 aa12.57□□□□□ -0.4
LRPPRC-207ENST00000467058 PLCD3Q8N3E9 789 aa12.52□□□□□ -0.41
LRPPRC-207ENST00000467058 DNAJC5Q9H3Z4 198 aa12.52□□□□□ -0.41
LRPPRC-207ENST00000467058 ZNF692Q9BU19 519 aaPredicted RBP12.49□□□□□ -0.41
LRPPRC-207ENST00000467058 SSUH2Q9Y2M2 353 aa12.49□□□□□ -0.41
LRPPRC-207ENST00000467058 ABCB7O75027 752 aa12.46□□□□□ -0.41
LRPPRC-207ENST00000467058 SPDYE2BA6NHP3 402 aa12.45□□□□□ -0.42
LRPPRC-207ENST00000467058 SPDYE6P0CI01 402 aa12.45□□□□□ -0.42
LRPPRC-207ENST00000467058 SPDYE2Q495Y8 402 aa12.45□□□□□ -0.42
LRPPRC-207ENST00000467058 CHGAP10645 457 aaKnown RBP12.44□□□□□ -0.42
LRPPRC-207ENST00000467058 MIER1Q8N108 512 aa12.44□□□□□ -0.42
LRPPRC-207ENST00000467058 TRIM41Q8WV44 630 aa12.39□□□□□ -0.43
LRPPRC-207ENST00000467058 PABPN1Q86U42 306 aaKnown RBP eCLIP12.37□□□□□ -0.43
LRPPRC-207ENST00000467058 HS6ST3Q8IZP7 471 aa12.37□□□□□ -0.43
LRPPRC-207ENST00000467058 CIZ1Q9ULV3 898 aaPredicted RBP12.37□□□□□ -0.43
LRPPRC-207ENST00000467058 ZBTB47Q9UFB7 747 aaPredicted RBP12.36□□□□□ -0.43
LRPPRC-207ENST00000467058 NBR1Q14596 966 aa12.35□□□□□ -0.43
LRPPRC-207ENST00000467058 OSCARQ8IYS5 282 aa12.35□□□□□ -0.43
LRPPRC-207ENST00000467058 PLEKHG5O94827 1062 aa12.28□□□□□ -0.44
LRPPRC-207ENST00000467058 DSG3P32926 999 aa12.26□□□□□ -0.45
LRPPRC-207ENST00000467058 RNF25Q96BH1 459 aaPredicted RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms