RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 DCAF8L2P0C7V8 631 aa36.64■■■■□ 3.46
CDC42BPB-201ENST00000361246 EHMT2Q96KQ7 1210 aa33.96■■■■□ 3.03
CDC42BPB-201ENST00000361246 SUPT5HO00267 1087 aaKnown RBP33.9■■■■□ 3.02
CDC42BPB-201ENST00000361246 SHROOM4Q9ULL8 1493 aa33.55■■■□□ 2.96
CDC42BPB-201ENST00000361246 TTBK1Q5TCY1 1321 aaPredicted RBP32.6■■■□□ 2.81
CDC42BPB-201ENST00000361246 NISCHQ9Y2I1 1504 aa32.55■■■□□ 2.8
CDC42BPB-201ENST00000361246 RANGAP1P46060 587 aaPredicted RBP32.4■■■□□ 2.78
CDC42BPB-201ENST00000361246 FAM9AQ8IZU1 332 aaPredicted RBP32.32■■■□□ 2.76
CDC42BPB-201ENST00000361246 APLP2Q06481 763 aa32.21■■■□□ 2.75
CDC42BPB-201ENST00000361246 ATP1B4Q9UN42 357 aaPredicted RBP32.02■■■□□ 2.72
CDC42BPB-201ENST00000361246 PCGF6Q9BYE7 350 aa31.4■■■□□ 2.62
CDC42BPB-201ENST00000361246 PELP1Q8IZL8 1130 aaKnown RBP31.32■■■□□ 2.6
CDC42BPB-201ENST00000361246 UBTFP17480 764 aaKnown RBP31.07■■■□□ 2.56
CDC42BPB-201ENST00000361246 MYT1LQ9UL68 1186 aa31.05■■■□□ 2.56
CDC42BPB-201ENST00000361246 TRIM41Q8WV44 630 aa31.04■■■□□ 2.56
CDC42BPB-201ENST00000361246 PPARGC1BQ86YN6 1023 aaKnown RBP30.97■■■□□ 2.55
CDC42BPB-201ENST00000361246 CHIC1Q5VXU3 224 aa30.96■■■□□ 2.55
CDC42BPB-201ENST00000361246 CCER1Q8TC90 406 aaPredicted RBP30.83■■■□□ 2.53
CDC42BPB-201ENST00000361246 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.75■■■□□ 2.51
CDC42BPB-201ENST00000361246 HNRNPUL2Q1KMD3 747 aaKnown RBP30.75■■■□□ 2.51
CDC42BPB-201ENST00000361246 ERICH6Q7L0X2 663 aa30.64■■■□□ 2.5
CDC42BPB-201ENST00000361246 POLR3GLQ9BT43 218 aa30.56■■■□□ 2.48
CDC42BPB-201ENST00000361246 YTHDC1Q96MU7 727 aaKnown RBP30.55■■■□□ 2.48
CDC42BPB-201ENST00000361246 ITGAEP38570 1179 aa30.55■■■□□ 2.48
CDC42BPB-201ENST00000361246 CNGB1Q14028 1251 aaPredicted RBP30.53■■■□□ 2.48
CDC42BPB-201ENST00000361246 SLC4A1APQ9BWU0 796 aaKnown RBP30.23■■■□□ 2.43
CDC42BPB-201ENST00000361246 CENPBP07199 599 aaPredicted RBP30.11■■■□□ 2.41
CDC42BPB-201ENST00000361246 NEFLP07196 543 aa30■■■□□ 2.39
CDC42BPB-201ENST00000361246 PABPN1Q86U42 306 aaKnown RBP eCLIP29.89■■■□□ 2.37
CDC42BPB-201ENST00000361246 ZEB1P37275 1124 aaPredicted RBP29.83■■■□□ 2.37
CDC42BPB-201ENST00000361246 LOC105371045A0A1W2PR82 267 aa29.68■■■□□ 2.34
CDC42BPB-201ENST00000361246 FBLN2P98095 1184 aa29.68■■■□□ 2.34
CDC42BPB-201ENST00000361246 ABCC9O60706 1549 aa29.57■■■□□ 2.32
CDC42BPB-201ENST00000361246 MYT1Q01538 1121 aa29.53■■■□□ 2.32
CDC42BPB-201ENST00000361246 FAM50AQ14320 339 aaKnown RBP29.49■■■□□ 2.31
CDC42BPB-201ENST00000361246 PLPPR3Q6T4P5 718 aa29.46■■■□□ 2.31
CDC42BPB-201ENST00000361246 DAXXQ9UER7 740 aaPredicted RBP29.45■■■□□ 2.31
CDC42BPB-201ENST00000361246 ARID3CA6NKF2 412 aa29.39■■■□□ 2.3
CDC42BPB-201ENST00000361246 TRIM52Q96A61 297 aa29.38■■■□□ 2.29
CDC42BPB-201ENST00000361246 SLC24A1O60721 1099 aa29.37■■■□□ 2.29
CDC42BPB-201ENST00000361246 BCANQ96GW7 911 aa29.35■■■□□ 2.29
CDC42BPB-201ENST00000361246 BCL11AQ9H165 835 aa29.32■■■□□ 2.28
CDC42BPB-201ENST00000361246 TRIM26Q12899 539 aaPredicted RBP29.27■■■□□ 2.28
CDC42BPB-201ENST00000361246 ZNF326Q5BKZ1 582 aaKnown RBP29.26■■■□□ 2.28
CDC42BPB-201ENST00000361246 NEUROD1Q13562 356 aa29.23■■■□□ 2.27
CDC42BPB-201ENST00000361246 CLSPNQ9HAW4 1339 aa29.12■■■□□ 2.25
CDC42BPB-201ENST00000361246 P3H3Q8IVL6 736 aa29.05■■■□□ 2.24
CDC42BPB-201ENST00000361246 HRCP23327 699 aa28.92■■■□□ 2.22
CDC42BPB-201ENST00000361246 ZNF777Q9ULD5 760 aaPredicted RBP28.83■■■□□ 2.21
CDC42BPB-201ENST00000361246 ZNF316A6NFI3 1004 aaPredicted RBP28.79■■■□□ 2.2
CDC42BPB-201ENST00000361246 SENP3Q9H4L4 574 aaPredicted RBP28.64■■■□□ 2.18
CDC42BPB-201ENST00000361246 ESF1Q9H501 851 aaKnown RBP28.62■■■□□ 2.17
CDC42BPB-201ENST00000361246 CHGAP10645 457 aaKnown RBP28.61■■■□□ 2.17
CDC42BPB-201ENST00000361246 ZBTB47Q9UFB7 747 aaPredicted RBP28.56■■■□□ 2.16
CDC42BPB-201ENST00000361246 PLEKHG5O94827 1062 aa28.54■■■□□ 2.16
CDC42BPB-201ENST00000361246 STAG3Q9UJ98 1225 aa28.53■■■□□ 2.16
CDC42BPB-201ENST00000361246 CANXP27824 592 aaKnown RBP28.5■■■□□ 2.15
CDC42BPB-201ENST00000361246 DIEXFQ68CQ4 756 aaKnown RBP28.49■■■□□ 2.15
CDC42BPB-201ENST00000361246 SCAF1Q9H7N4 1312 aaKnown RBP28.45■■■□□ 2.14
CDC42BPB-201ENST00000361246 A0A0G2JS52 829 aa28.38■■■□□ 2.13
CDC42BPB-201ENST00000361246 NEFMP07197 916 aa28.34■■■□□ 2.13
CDC42BPB-201ENST00000361246 ANP32CO43423 234 aa28.29■■■□□ 2.12
CDC42BPB-201ENST00000361246 RTL5Q5HYW3 569 aaPredicted RBP28.27■■■□□ 2.12
CDC42BPB-201ENST00000361246 NPM1P06748 294 aaKnown RBP eCLIP28.26■■■□□ 2.11
CDC42BPB-201ENST00000361246 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.26■■■□□ 2.118e-7■■■■□ 20.8
CDC42BPB-201ENST00000361246 ZBTB7CA1YPR0 619 aa28.19■■■□□ 2.1
CDC42BPB-201ENST00000361246 SCRIBQ14160 1630 aa28.11■■■□□ 2.09
CDC42BPB-201ENST00000361246 SALL2Q9Y467 1007 aaPredicted RBP28.09■■■□□ 2.09
CDC42BPB-201ENST00000361246 CHIC2Q9UKJ5 165 aa28.04■■■□□ 2.08
CDC42BPB-201ENST00000361246 CDK11AQ9UQ88 783 aaPredicted RBP27.95■■■□□ 2.07
CDC42BPB-201ENST00000361246 NPM2Q86SE8 214 aaKnown RBP27.95■■■□□ 2.06
CDC42BPB-201ENST00000361246 C14orf37Q86TY3 774 aa27.93■■■□□ 2.06
CDC42BPB-201ENST00000361246 KDM2AQ9Y2K7 1162 aa27.89■■■□□ 2.06
CDC42BPB-201ENST00000361246 KCNH8Q96L42 1107 aa27.86■■■□□ 2.05
CDC42BPB-201ENST00000361246 CSRNP3Q8WYN3 585 aa27.82■■■□□ 2.04
CDC42BPB-201ENST00000361246 CHMP7Q8WUX9 453 aaPredicted RBP27.8■■■□□ 2.04
CDC42BPB-201ENST00000361246 ARID4BQ4LE39 1312 aaPredicted RBP27.78■■■□□ 2.04
CDC42BPB-201ENST00000361246 GTF3C3Q9Y5Q9 886 aa27.77■■■□□ 2.04
CDC42BPB-201ENST00000361246 FAM9BQ8IZU0 186 aa27.72■■■□□ 2.03
CDC42BPB-201ENST00000361246 HAP1P54257 671 aaPredicted RBP27.63■■■□□ 2.01
CDC42BPB-201ENST00000361246 ARXQ96QS3 562 aa27.62■■■□□ 2.01
CDC42BPB-201ENST00000361246 PPP1R15AO75807 674 aaPredicted RBP27.6■■■□□ 2.01
CDC42BPB-201ENST00000361246 TONSLQ96HA7 1378 aa27.6■■■□□ 2.01
CDC42BPB-201ENST00000361246 HIRIP3Q9BW71 556 aaPredicted RBP27.58■■■□□ 2.01
CDC42BPB-201ENST00000361246 SENP3-EIF4A1A0A087X0R7 540 aa27.58■■■□□ 2.01
CDC42BPB-201ENST00000361246 HSP90AA1P07900 732 aaKnown RBP27.57■■■□□ 2
CDC42BPB-201ENST00000361246 TRHP20396 242 aaPredicted RBP27.53■■■□□ 2
CDC42BPB-201ENST00000361246 DDX10Q13206 875 aaKnown RBP27.53■■■□□ 2
CDC42BPB-201ENST00000361246 TSPY4P0CV99 314 aa27.47■■□□□ 1.99
CDC42BPB-201ENST00000361246 TSPY10P0CW01 314 aa27.47■■□□□ 1.99
CDC42BPB-201ENST00000361246 HNRNPUQ00839 825 aaKnown RBP eCLIP27.45■■□□□ 1.98
CDC42BPB-201ENST00000361246 LMOD2Q6P5Q4 547 aa27.44■■□□□ 1.98
CDC42BPB-201ENST00000361246 RRP7BPQ9NSQ0 103 aa27.43■■□□□ 1.98
CDC42BPB-201ENST00000361246 TMC1Q8TDI8 760 aa27.43■■□□□ 1.98
CDC42BPB-201ENST00000361246 RGL3Q3MIN7 710 aa27.41■■□□□ 1.98
CDC42BPB-201ENST00000361246 WDR43Q15061 677 aaKnown RBP eCLIP27.4■■□□□ 1.98
CDC42BPB-201ENST00000361246 ANP32AP39687 249 aaKnown RBP27.38■■□□□ 1.97
CDC42BPB-201ENST00000361246 TULP1O00294 542 aaPredicted RBP27.38■■□□□ 1.97
CDC42BPB-201ENST00000361246 PPM1GO15355 546 aaPredicted RBP27.38■■□□□ 1.97
CDC42BPB-201ENST00000361246 FKBP8Q14318 412 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms