RNA–Protein interactions for RNA: ENST00000641968.1

CASC19-271, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 842 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-271ENST00000641968 AEBP2Q6ZN18 517 aaPredicted RBP24.29■■□□□ 1.48
CASC19-271ENST00000641968 CHIC1Q5VXU3 224 aa23.54■■□□□ 1.36
CASC19-271ENST00000641968 PHF23Q9BUL5 403 aaPredicted RBP20.73■□□□□ 0.91
CASC19-271ENST00000641968 SENP3Q9H4L4 574 aaPredicted RBP20.57■□□□□ 0.88
CASC19-271ENST00000641968 FOXD1Q16676 465 aa19.16■□□□□ 0.66
CASC19-271ENST00000641968 PLPPR3Q6T4P5 718 aa19.04■□□□□ 0.64
CASC19-271ENST00000641968 PPP6R1Q9UPN7 881 aa18.35■□□□□ 0.53
CASC19-271ENST00000641968 ADRA2BP18089 450 aa18.33■□□□□ 0.52
CASC19-271ENST00000641968 PIAS4Q8N2W9 510 aaPredicted RBP18.03■□□□□ 0.48
CASC19-271ENST00000641968 MSH5O43196 834 aa17.66■□□□□ 0.42
CASC19-271ENST00000641968 PPP4R3CPQ6ZMV5 832 aa16.8■□□□□ 0.28
CASC19-271ENST00000641968 MAPK8IP2Q13387 824 aaPredicted RBP16.69■□□□□ 0.26
CASC19-271ENST00000641968 SCAF1Q9H7N4 1312 aaKnown RBP16.69■□□□□ 0.26
CASC19-271ENST00000641968 DMRT2Q9Y5R5 561 aa16.41■□□□□ 0.22
CASC19-271ENST00000641968 POTEDQ86YR6 584 aa16.38■□□□□ 0.21
CASC19-271ENST00000641968 CNKSR2Q8WXI2 1034 aa16.32■□□□□ 0.2
CASC19-271ENST00000641968 KCNA4P22459 653 aa16.27■□□□□ 0.2
CASC19-271ENST00000641968 NCBP3Q53F19 620 aaKnown RBP16.27■□□□□ 0.2
CASC19-271ENST00000641968 NPM3O75607 178 aaKnown RBP16.08■□□□□ 0.16
CASC19-271ENST00000641968 RNF216Q9NWF9 866 aaPredicted RBP16.03■□□□□ 0.16
CASC19-271ENST00000641968 HOXD11P31277 338 aaPredicted RBP16.01■□□□□ 0.15
CASC19-271ENST00000641968 DCAF8L1A6NGE4 600 aa15.77■□□□□ 0.12
CASC19-271ENST00000641968 DNAJC5BQ9UF47 199 aa15.53■□□□□ 0.08
CASC19-271ENST00000641968 SLC4A1APQ9BWU0 796 aaKnown RBP15.45■□□□□ 0.06
CASC19-271ENST00000641968 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.29■□□□□ 0.04
CASC19-271ENST00000641968 SLC4A2P04920 1241 aa15.23■□□□□ 0.03
CASC19-271ENST00000641968 RNF39Q9H2S5 420 aa15.15■□□□□ 0.02
CASC19-271ENST00000641968 U3KPZ7 1027 aaPredicted RBP15.03■□□□□ -0
CASC19-271ENST00000641968 ZBTB22O15209 634 aa14.99□□□□□ -0.01
CASC19-271ENST00000641968 FOXD4L1Q9NU39 408 aa14.98□□□□□ -0.01
CASC19-271ENST00000641968 C1QBPQ07021 282 aaKnown RBP14.93□□□□□ -0.02
CASC19-271ENST00000641968 EHMT2Q96KQ7 1210 aa14.9□□□□□ -0.02
CASC19-271ENST00000641968 CACNB1Q02641 598 aaPredicted RBP14.88□□□□□ -0.03
CASC19-271ENST00000641968 MYCNP04198 464 aaPredicted RBP14.83□□□□□ -0.04
CASC19-271ENST00000641968 CSRNP3Q8WYN3 585 aa14.77□□□□□ -0.05
CASC19-271ENST00000641968 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.72□□□□□ -0.05
CASC19-271ENST00000641968 HNRNPUL2Q1KMD3 747 aaKnown RBP14.72□□□□□ -0.05
CASC19-271ENST00000641968 SAMD1Q6SPF0 538 aaPredicted RBP14.68□□□□□ -0.06
CASC19-271ENST00000641968 SPINK5Q9NQ38 1064 aaPredicted RBP14.68□□□□□ -0.06
CASC19-271ENST00000641968 CAPN15O75808 1086 aa14.61□□□□□ -0.07
CASC19-271ENST00000641968 APLP2Q06481 763 aa14.59□□□□□ -0.07
CASC19-271ENST00000641968 TRHP20396 242 aaPredicted RBP14.52□□□□□ -0.09
CASC19-271ENST00000641968 ATF5Q9Y2D1 282 aaPredicted RBP14.52□□□□□ -0.09
CASC19-271ENST00000641968 ZNF219Q9P2Y4 722 aaPredicted RBP14.45□□□□□ -0.1
CASC19-271ENST00000641968 ATXN8OSP0DMR3 200 aa14.42□□□□□ -0.1
CASC19-271ENST00000641968 DSG3P32926 999 aa14.38□□□□□ -0.11
CASC19-271ENST00000641968 ABCB7O75027 752 aa14.36□□□□□ -0.11
CASC19-271ENST00000641968 POLA2Q14181 598 aa14.24□□□□□ -0.13
CASC19-271ENST00000641968 ZBTB12Q9Y330 459 aaPredicted RBP13.91□□□□□ -0.18
CASC19-271ENST00000641968 MKRN4PQ13434 485 aaPredicted RBP13.85□□□□□ -0.19
CASC19-271ENST00000641968 FBLN2P98095 1184 aa13.84□□□□□ -0.19
CASC19-271ENST00000641968 OSCARQ8IYS5 282 aa13.77□□□□□ -0.21
CASC19-271ENST00000641968 RBM42Q9BTD8 480 aaKnown RBP13.66□□□□□ -0.22
CASC19-271ENST00000641968 SPDYE2BA6NHP3 402 aa13.56□□□□□ -0.24
CASC19-271ENST00000641968 SPDYE6P0CI01 402 aa13.56□□□□□ -0.24
CASC19-271ENST00000641968 SPDYE2Q495Y8 402 aa13.56□□□□□ -0.24
CASC19-271ENST00000641968 ZNF692Q9BU19 519 aaPredicted RBP13.52□□□□□ -0.25
CASC19-271ENST00000641968 AKT1S1Q96B36 256 aa13.48□□□□□ -0.25
CASC19-271ENST00000641968 SPDYE4A6NLX3 237 aa13.46□□□□□ -0.25
CASC19-271ENST00000641968 SSUH2Q9Y2M2 353 aa13.45□□□□□ -0.26
CASC19-271ENST00000641968 REM2Q8IYK8 340 aaPredicted RBP13.38□□□□□ -0.27
CASC19-271ENST00000641968 FKBP8Q14318 412 aa13.37□□□□□ -0.27
CASC19-271ENST00000641968 PABPN1Q86U42 306 aaKnown RBP eCLIP13.35□□□□□ -0.27
CASC19-271ENST00000641968 PITPNM1O00562 1244 aa13.24□□□□□ -0.29
CASC19-271ENST00000641968 CLEC11AQ9Y240 323 aa13.21□□□□□ -0.29
CASC19-271ENST00000641968 SPDYE1Q8NFV5 336 aaPredicted RBP13.2□□□□□ -0.3
CASC19-271ENST00000641968 CHRDL2Q6WN34 429 aa13.19□□□□□ -0.3
CASC19-271ENST00000641968 PROM2Q8N271 834 aa13.18□□□□□ -0.3
CASC19-271ENST00000641968 PRR29P0C7W0 189 aa13.04□□□□□ -0.32
CASC19-271ENST00000641968 STAG3Q9UJ98 1225 aa13.04□□□□□ -0.32
CASC19-271ENST00000641968 PIP4P2Q8N4L2 257 aa13.01□□□□□ -0.33
CASC19-271ENST00000641968 FXR2P51116 673 aaKnown RBP eCLIP13□□□□□ -0.33
CASC19-271ENST00000641968 POTEHQ6S545 545 aa12.93□□□□□ -0.34
CASC19-271ENST00000641968 PRKAR2AP13861 404 aaKnown RBP12.91□□□□□ -0.34
CASC19-271ENST00000641968 CHADLQ6NUI6 762 aa12.91□□□□□ -0.34
CASC19-271ENST00000641968 FBXO3Q9UK99 471 aa12.86□□□□□ -0.35
CASC19-271ENST00000641968 CREBZFQ9NS37 354 aa12.84□□□□□ -0.35
CASC19-271ENST00000641968 MIER1Q8N108 512 aa12.79□□□□□ -0.36
CASC19-271ENST00000641968 PLCD3Q8N3E9 789 aa12.75□□□□□ -0.37
CASC19-271ENST00000641968 VASPP50552 380 aaPredicted RBP12.73□□□□□ -0.37
CASC19-271ENST00000641968 FARP1Q9Y4F1 1045 aaPredicted RBP12.73□□□□□ -0.37
CASC19-271ENST00000641968 MNX1P50219 401 aaPredicted RBP12.69□□□□□ -0.38
CASC19-271ENST00000641968 PLEKHG5O94827 1062 aa12.68□□□□□ -0.38
CASC19-271ENST00000641968 HAX1O00165 279 aa12.63□□□□□ -0.39
CASC19-271ENST00000641968 NPM1P06748 294 aaKnown RBP eCLIP12.59□□□□□ -0.39
CASC19-271ENST00000641968 IFNLR1Q8IU57 520 aaPredicted RBP12.57□□□□□ -0.4
CASC19-271ENST00000641968 KLHL34Q8N239 644 aa12.56□□□□□ -0.4
CASC19-271ENST00000641968 C19orf67A6NJJ6 358 aa12.55□□□□□ -0.4
CASC19-271ENST00000641968 EVX2Q03828 476 aa12.55□□□□□ -0.4
CASC19-271ENST00000641968 ZBTB47Q9UFB7 747 aaPredicted RBP12.55□□□□□ -0.4
CASC19-271ENST00000641968 CD44P16070 742 aaKnown RBP12.52□□□□□ -0.41
CASC19-271ENST00000641968 NUBP1P53384 320 aa12.46□□□□□ -0.41
CASC19-271ENST00000641968 RASEFQ8IZ41 740 aa12.46□□□□□ -0.41
CASC19-271ENST00000641968 ZRANB1Q9UGI0 708 aa12.45□□□□□ -0.42
CASC19-271ENST00000641968 TSPYL2Q9H2G4 693 aaPredicted RBP12.44□□□□□ -0.42
CASC19-271ENST00000641968 PAK3O75914 559 aaPredicted RBP12.41□□□□□ -0.42
CASC19-271ENST00000641968 SPOCK2Q92563 424 aa12.41□□□□□ -0.42
CASC19-271ENST00000641968 SP7Q8TDD2 431 aaPredicted RBP12.37□□□□□ -0.43
CASC19-271ENST00000641968 DCAF8Q5TAQ9 597 aa12.35□□□□□ -0.43
CASC19-271ENST00000641968 FAM212AQ96EL1 285 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms