RNA–Protein interactions for RNA: ENST00000604754.1

ZSWIM8-222, Transcript of zinc finger SWIM-type containing 8, humanhuman

TSL 1 (best)

Gene ZSWIM8, Length 3,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM8-222ENST00000604754 NISCHQ9Y2I1 1504 aa23.77■■□□□ 1.4
ZSWIM8-222ENST00000604754 DCAF8L2P0C7V8 631 aa21.12■□□□□ 0.97
ZSWIM8-222ENST00000604754 SHROOM4Q9ULL8 1493 aa20.86■□□□□ 0.93
ZSWIM8-222ENST00000604754 SUPT5HO00267 1087 aaKnown RBP20.33■□□□□ 0.84
ZSWIM8-222ENST00000604754 CCDC180Q9P1Z9 1646 aa20.02■□□□□ 0.8
ZSWIM8-222ENST00000604754 ZCCHC6Q5VYS8 1495 aaKnown RBP19.9■□□□□ 0.78
ZSWIM8-222ENST00000604754 ABCC9O60706 1549 aa19.84■□□□□ 0.77
ZSWIM8-222ENST00000604754 SCRIBQ14160 1630 aa19.32■□□□□ 0.68
ZSWIM8-222ENST00000604754 PABPN1Q86U42 306 aaKnown RBP eCLIP19.18■□□□□ 0.661e-6■■■■□ 24.5
ZSWIM8-222ENST00000604754 EHMT2Q96KQ7 1210 aa19.12■□□□□ 0.65
ZSWIM8-222ENST00000604754 DCAF1Q9Y4B6 1507 aa19.12■□□□□ 0.65
ZSWIM8-222ENST00000604754 CHIC1Q5VXU3 224 aa19.06■□□□□ 0.64
ZSWIM8-222ENST00000604754 FAM9AQ8IZU1 332 aaPredicted RBP18.95■□□□□ 0.62
ZSWIM8-222ENST00000604754 NACADO15069 1562 aa18.86■□□□□ 0.61
ZSWIM8-222ENST00000604754 CECR2Q9BXF3 1484 aa18.84■□□□□ 0.61
ZSWIM8-222ENST00000604754 LOC105371045A0A1W2PR82 267 aa18.81■□□□□ 0.6
ZSWIM8-222ENST00000604754 RSF1Q96T23 1441 aaPredicted RBP18.79■□□□□ 0.6
ZSWIM8-222ENST00000604754 RB1CC1Q8TDY2 1594 aa18.78■□□□□ 0.6
ZSWIM8-222ENST00000604754 TRIM41Q8WV44 630 aa18.76■□□□□ 0.59
ZSWIM8-222ENST00000604754 MYO15BQ96JP2 1530 aa18.67■□□□□ 0.58
ZSWIM8-222ENST00000604754 MROH2BQ7Z745 1585 aa18.6■□□□□ 0.57
ZSWIM8-222ENST00000604754 WIZO95785 1651 aa18.44■□□□□ 0.54
ZSWIM8-222ENST00000604754 PCGF6Q9BYE7 350 aa18.4■□□□□ 0.54
ZSWIM8-222ENST00000604754 PPARGC1BQ86YN6 1023 aaKnown RBP18.33■□□□□ 0.52
ZSWIM8-222ENST00000604754 TTBK1Q5TCY1 1321 aaPredicted RBP18.31■□□□□ 0.52
ZSWIM8-222ENST00000604754 BAZ1AQ9NRL2 1556 aaPredicted RBP18.29■□□□□ 0.52
ZSWIM8-222ENST00000604754 RANGAP1P46060 587 aaPredicted RBP18.27■□□□□ 0.52
ZSWIM8-222ENST00000604754 UNC13AQ9UPW8 1703 aa18.21■□□□□ 0.51
ZSWIM8-222ENST00000604754 BICRAQ9NZM4 1560 aa18.15■□□□□ 0.5
ZSWIM8-222ENST00000604754 SMARCA4P51532 1647 aa18.14■□□□□ 0.49
ZSWIM8-222ENST00000604754 CCDC88BA6NC98 1476 aa18.13■□□□□ 0.49
ZSWIM8-222ENST00000604754 UBTFP17480 764 aaKnown RBP18.1■□□□□ 0.49
ZSWIM8-222ENST00000604754 ABCC8Q09428 1581 aa18.06■□□□□ 0.48
ZSWIM8-222ENST00000604754 BAZ1BQ9UIG0 1483 aaKnown RBP18■□□□□ 0.47
ZSWIM8-222ENST00000604754 TOP2AP11388 1531 aaKnown RBP17.98■□□□□ 0.47
ZSWIM8-222ENST00000604754 ATAD2BQ9ULI0 1458 aa17.95■□□□□ 0.46
ZSWIM8-222ENST00000604754 SMARCA2P51531 1590 aa17.9■□□□□ 0.46
ZSWIM8-222ENST00000604754 SOGA1O94964 1423 aa17.87■□□□□ 0.45
ZSWIM8-222ENST00000604754 CSRNP3Q8WYN3 585 aa17.84■□□□□ 0.45
ZSWIM8-222ENST00000604754 TRIM26Q12899 539 aaPredicted RBP17.81■□□□□ 0.44
ZSWIM8-222ENST00000604754 WRNQ14191 1432 aaPredicted RBP eCLIP17.79■□□□□ 0.443e-7■■■■□ 25.1
ZSWIM8-222ENST00000604754 RUSC2Q8N2Y8 1516 aa17.78■□□□□ 0.44
ZSWIM8-222ENST00000604754 EIF4G1Q04637 1599 aaKnown RBP17.75■□□□□ 0.43
ZSWIM8-222ENST00000604754 DNAJC5BQ9UF47 199 aa17.72■□□□□ 0.43
ZSWIM8-222ENST00000604754 HRCP23327 699 aa17.66■□□□□ 0.42
ZSWIM8-222ENST00000604754 APLP2Q06481 763 aa17.6■□□□□ 0.41
ZSWIM8-222ENST00000604754 ATP1B4Q9UN42 357 aaPredicted RBP17.6■□□□□ 0.41
ZSWIM8-222ENST00000604754 NCAPD3P42695 1498 aa17.56■□□□□ 0.4
ZSWIM8-222ENST00000604754 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.53■□□□□ 0.4
ZSWIM8-222ENST00000604754 PEG3Q9GZU2 1588 aa17.52■□□□□ 0.4
ZSWIM8-222ENST00000604754 CEP162Q5TB80 1403 aa17.51■□□□□ 0.39
ZSWIM8-222ENST00000604754 SYNJ1O43426 1573 aa17.51■□□□□ 0.39
ZSWIM8-222ENST00000604754 P3H3Q8IVL6 736 aa17.5■□□□□ 0.39
ZSWIM8-222ENST00000604754 CC2D2AQ9P2K1 1620 aa17.48■□□□□ 0.39
ZSWIM8-222ENST00000604754 HNRNPUL2Q1KMD3 747 aaKnown RBP17.48■□□□□ 0.39
ZSWIM8-222ENST00000604754 CCER1Q8TC90 406 aaPredicted RBP17.46■□□□□ 0.39
ZSWIM8-222ENST00000604754 CADPSQ9ULU8 1353 aa17.43■□□□□ 0.38
ZSWIM8-222ENST00000604754 NESP48681 1621 aa17.42■□□□□ 0.38
ZSWIM8-222ENST00000604754 GOLGA3Q08378 1498 aa17.39■□□□□ 0.37
ZSWIM8-222ENST00000604754 TNIKQ9UKE5 1360 aa17.38■□□□□ 0.37
ZSWIM8-222ENST00000604754 ITGAEP38570 1179 aa17.38■□□□□ 0.37
ZSWIM8-222ENST00000604754 RAPGEF2Q9Y4G8 1499 aa17.38■□□□□ 0.37
ZSWIM8-222ENST00000604754 EEA1Q15075 1411 aa17.35■□□□□ 0.37
ZSWIM8-222ENST00000604754 HMGXB3Q12766 1538 aa17.35■□□□□ 0.37
ZSWIM8-222ENST00000604754 CLIP1P30622 1438 aa17.35■□□□□ 0.37
ZSWIM8-222ENST00000604754 CFTRP13569 1480 aa17.33■□□□□ 0.36
ZSWIM8-222ENST00000604754 CUX2O14529 1486 aa17.32■□□□□ 0.36
ZSWIM8-222ENST00000604754 CEP164Q9UPV0 1460 aa17.31■□□□□ 0.36
ZSWIM8-222ENST00000604754 KIF27Q86VH2 1401 aa17.29■□□□□ 0.36
ZSWIM8-222ENST00000604754 CUX1P39880 1505 aa17.29■□□□□ 0.36
ZSWIM8-222ENST00000604754 FANCD2Q9BXW9 1451 aa17.26■□□□□ 0.35
ZSWIM8-222ENST00000604754 ARID3CA6NKF2 412 aa17.25■□□□□ 0.35
ZSWIM8-222ENST00000604754 TDRD9Q8NDG6 1382 aaKnown RBP17.23■□□□□ 0.35
ZSWIM8-222ENST00000604754 RAD54L2Q9Y4B4 1467 aa17.23■□□□□ 0.35
ZSWIM8-222ENST00000604754 FBLN2P98095 1184 aa17.2■□□□□ 0.34
ZSWIM8-222ENST00000604754 TOP2BQ02880 1626 aa17.19■□□□□ 0.34
ZSWIM8-222ENST00000604754 FGD5Q6ZNL6 1462 aa17.19■□□□□ 0.34
ZSWIM8-222ENST00000604754 CARMIL1Q5VZK9 1371 aa17.16■□□□□ 0.34
ZSWIM8-222ENST00000604754 KANK4Q5T7N3 995 aaPredicted RBP17.14■□□□□ 0.33
ZSWIM8-222ENST00000604754 IGF1RP08069 1367 aa17.13■□□□□ 0.33
ZSWIM8-222ENST00000604754 ZEB1P37275 1124 aaPredicted RBP17.11■□□□□ 0.33
ZSWIM8-222ENST00000604754 FAM50AQ14320 339 aaKnown RBP17.06■□□□□ 0.32
ZSWIM8-222ENST00000604754 PDS5BQ9NTI5 1447 aa17.05■□□□□ 0.32
ZSWIM8-222ENST00000604754 VPS8Q8N3P4 1428 aa17.04■□□□□ 0.32
ZSWIM8-222ENST00000604754 PRXQ9BXM0 1461 aa17.01■□□□□ 0.31
ZSWIM8-222ENST00000604754 POLA1P09884 1462 aaPredicted RBP17■□□□□ 0.31
ZSWIM8-222ENST00000604754 TOPBP1Q92547 1522 aa17■□□□□ 0.31
ZSWIM8-222ENST00000604754 KIF21BO75037 1637 aa16.98■□□□□ 0.31
ZSWIM8-222ENST00000604754 BIVM-ERCC5R4GMW8 1640 aa16.98■□□□□ 0.31
ZSWIM8-222ENST00000604754 ERCC6Q03468 1493 aa16.98■□□□□ 0.31
ZSWIM8-222ENST00000604754 ARAP1Q96P48 1450 aa16.95■□□□□ 0.3
ZSWIM8-222ENST00000604754 URB2Q14146 1524 aaKnown RBP16.93■□□□□ 0.3
ZSWIM8-222ENST00000604754 AQRO60306 1485 aaKnown RBP eCLIP16.93■□□□□ 0.32e-7■■■■□ 21.2
ZSWIM8-222ENST00000604754 FHOD3Q2V2M9 1422 aa16.91■□□□□ 0.3
ZSWIM8-222ENST00000604754 CHMP7Q8WUX9 453 aaPredicted RBP16.87■□□□□ 0.29
ZSWIM8-222ENST00000604754 ARHGAP35Q9NRY4 1499 aa16.86■□□□□ 0.29
ZSWIM8-222ENST00000604754 DNMBPQ6XZF7 1577 aa16.85■□□□□ 0.29
ZSWIM8-222ENST00000604754 GAPVD1Q14C86 1478 aa16.84■□□□□ 0.29
ZSWIM8-222ENST00000604754 LAMC3Q9Y6N6 1575 aa16.82■□□□□ 0.28
ZSWIM8-222ENST00000604754 ERICH3Q5RHP9 1530 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms