RNA–Protein interactions for RNA: ENST00000506974.5

NDUFS4-204, Transcript of NADH:ubiquinone oxidoreductase subunit S4, humanhuman

TSL 1 (best)

Gene NDUFS4, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4-204ENST00000506974 CHIC1Q5VXU3 224 aa25.63■■□□□ 1.69
NDUFS4-204ENST00000506974 AEBP2Q6ZN18 517 aaPredicted RBP25.52■■□□□ 1.68
NDUFS4-204ENST00000506974 NISCHQ9Y2I1 1504 aa23.58■■□□□ 1.36
NDUFS4-204ENST00000506974 PHF23Q9BUL5 403 aaPredicted RBP22.51■■□□□ 1.19
NDUFS4-204ENST00000506974 SENP3Q9H4L4 574 aaPredicted RBP21.71■■□□□ 1.07
NDUFS4-204ENST00000506974 PLPPR3Q6T4P5 718 aa21.13■□□□□ 0.97
NDUFS4-204ENST00000506974 CCDC180Q9P1Z9 1646 aa20.86■□□□□ 0.93
NDUFS4-204ENST00000506974 ABCC9O60706 1549 aa20.06■□□□□ 0.8
NDUFS4-204ENST00000506974 FOXD1Q16676 465 aa19.96■□□□□ 0.79
NDUFS4-204ENST00000506974 ZCCHC6Q5VYS8 1495 aaKnown RBP19.76■□□□□ 0.75
NDUFS4-204ENST00000506974 ADRA2BP18089 450 aa19.65■□□□□ 0.74
NDUFS4-204ENST00000506974 PPP6R1Q9UPN7 881 aa19.63■□□□□ 0.73
NDUFS4-204ENST00000506974 DCAF1Q9Y4B6 1507 aa19.56■□□□□ 0.72
NDUFS4-204ENST00000506974 MYO15BQ96JP2 1530 aa19.46■□□□□ 0.71
NDUFS4-204ENST00000506974 NACADO15069 1562 aa19.42■□□□□ 0.7
NDUFS4-204ENST00000506974 RB1CC1Q8TDY2 1594 aa19.36■□□□□ 0.69
NDUFS4-204ENST00000506974 DCAF8L2P0C7V8 631 aa19.32■□□□□ 0.68
NDUFS4-204ENST00000506974 UNC13AQ9UPW8 1703 aa19.08■□□□□ 0.65
NDUFS4-204ENST00000506974 SCRIBQ14160 1630 aa19.01■□□□□ 0.63
NDUFS4-204ENST00000506974 PIAS4Q8N2W9 510 aaPredicted RBP19■□□□□ 0.63
NDUFS4-204ENST00000506974 KCNA4P22459 653 aa18.83■□□□□ 0.6
NDUFS4-204ENST00000506974 SHROOM4Q9ULL8 1493 aa18.81■□□□□ 0.6
NDUFS4-204ENST00000506974 BICRAQ9NZM4 1560 aa18.79■□□□□ 0.6
NDUFS4-204ENST00000506974 PABPN1Q86U42 306 aaKnown RBP eCLIP18.73■□□□□ 0.59
NDUFS4-204ENST00000506974 PPP4R3CPQ6ZMV5 832 aa18.63■□□□□ 0.57
NDUFS4-204ENST00000506974 DNAJC5BQ9UF47 199 aa18.52■□□□□ 0.56
NDUFS4-204ENST00000506974 NCBP3Q53F19 620 aaKnown RBP18.42■□□□□ 0.54
NDUFS4-204ENST00000506974 CECR2Q9BXF3 1484 aa18.31■□□□□ 0.52
NDUFS4-204ENST00000506974 MSH5O43196 834 aa18.3■□□□□ 0.52
NDUFS4-204ENST00000506974 SMARCA4P51532 1647 aa18.25■□□□□ 0.51
NDUFS4-204ENST00000506974 EIF4G1Q04637 1599 aaKnown RBP18.24■□□□□ 0.51
NDUFS4-204ENST00000506974 BAZ1AQ9NRL2 1556 aaPredicted RBP18.24■□□□□ 0.51
NDUFS4-204ENST00000506974 MROH2BQ7Z745 1585 aa18.19■□□□□ 0.5
NDUFS4-204ENST00000506974 EHMT2Q96KQ7 1210 aa18.19■□□□□ 0.5
NDUFS4-204ENST00000506974 CC2D2AQ9P2K1 1620 aa18.17■□□□□ 0.5
NDUFS4-204ENST00000506974 SCAF1Q9H7N4 1312 aaKnown RBP18.17■□□□□ 0.5
NDUFS4-204ENST00000506974 RSF1Q96T23 1441 aaPredicted RBP18.1■□□□□ 0.49
NDUFS4-204ENST00000506974 SLC4A1APQ9BWU0 796 aaKnown RBP18.1■□□□□ 0.49
NDUFS4-204ENST00000506974 PEG3Q9GZU2 1588 aa18.07■□□□□ 0.48
NDUFS4-204ENST00000506974 WIZO95785 1651 aa18.06■□□□□ 0.48
NDUFS4-204ENST00000506974 NPM3O75607 178 aaKnown RBP18.03■□□□□ 0.48
NDUFS4-204ENST00000506974 CNKSR2Q8WXI2 1034 aa18.03■□□□□ 0.48
NDUFS4-204ENST00000506974 SMARCA2P51531 1590 aa17.98■□□□□ 0.47
NDUFS4-204ENST00000506974 ATAD2BQ9ULI0 1458 aa17.97■□□□□ 0.47
NDUFS4-204ENST00000506974 HMGXB3Q12766 1538 aa17.89■□□□□ 0.45
NDUFS4-204ENST00000506974 NCAPD3P42695 1498 aa17.88■□□□□ 0.45
NDUFS4-204ENST00000506974 SUPT5HO00267 1087 aaKnown RBP17.87■□□□□ 0.45
NDUFS4-204ENST00000506974 TOP2AP11388 1531 aaKnown RBP17.87■□□□□ 0.45
NDUFS4-204ENST00000506974 BAZ1BQ9UIG0 1483 aaKnown RBP17.83■□□□□ 0.45
NDUFS4-204ENST00000506974 CSRNP3Q8WYN3 585 aa17.75■□□□□ 0.43
NDUFS4-204ENST00000506974 CCDC88BA6NC98 1476 aa17.62■□□□□ 0.41
NDUFS4-204ENST00000506974 MAPK8IP2Q13387 824 aaPredicted RBP17.61■□□□□ 0.41
NDUFS4-204ENST00000506974 RNF216Q9NWF9 866 aaPredicted RBP17.54■□□□□ 0.4
NDUFS4-204ENST00000506974 PRDM2Q13029 1718 aa17.49■□□□□ 0.39
NDUFS4-204ENST00000506974 DMRT2Q9Y5R5 561 aa17.4■□□□□ 0.38
NDUFS4-204ENST00000506974 CFTRP13569 1480 aa17.38■□□□□ 0.37
NDUFS4-204ENST00000506974 LAMC3Q9Y6N6 1575 aa17.38■□□□□ 0.37
NDUFS4-204ENST00000506974 CADPSQ9ULU8 1353 aa17.35■□□□□ 0.37
NDUFS4-204ENST00000506974 NESP48681 1621 aa17.33■□□□□ 0.37
NDUFS4-204ENST00000506974 ERCC6Q03468 1493 aa17.33■□□□□ 0.37
NDUFS4-204ENST00000506974 ZBTB22O15209 634 aa17.31■□□□□ 0.36
NDUFS4-204ENST00000506974 HOXD11P31277 338 aaPredicted RBP17.3■□□□□ 0.36
NDUFS4-204ENST00000506974 PDS5BQ9NTI5 1447 aa17.3■□□□□ 0.36
NDUFS4-204ENST00000506974 CUX2O14529 1486 aa17.27■□□□□ 0.36
NDUFS4-204ENST00000506974 FOXD4L1Q9NU39 408 aa17.25■□□□□ 0.35
NDUFS4-204ENST00000506974 KIF21AQ7Z4S6 1674 aa17.25■□□□□ 0.35
NDUFS4-204ENST00000506974 FANCD2Q9BXW9 1451 aa17.18■□□□□ 0.34
NDUFS4-204ENST00000506974 ABCC8Q09428 1581 aa17.14■□□□□ 0.33
NDUFS4-204ENST00000506974 CEP164Q9UPV0 1460 aa17.12■□□□□ 0.33
NDUFS4-204ENST00000506974 THOC2Q8NI27 1593 aaKnown RBP17.1■□□□□ 0.33
NDUFS4-204ENST00000506974 BIVM-ERCC5R4GMW8 1640 aa17.07■□□□□ 0.32
NDUFS4-204ENST00000506974 SYNJ1O43426 1573 aa17.06■□□□□ 0.32
NDUFS4-204ENST00000506974 MRC2Q9UBG0 1479 aa17.05■□□□□ 0.32
NDUFS4-204ENST00000506974 CUX1P39880 1505 aa17.05■□□□□ 0.32
NDUFS4-204ENST00000506974 WRNQ14191 1432 aaPredicted RBP eCLIP17.04■□□□□ 0.32
NDUFS4-204ENST00000506974 TOP2BQ02880 1626 aa17.03■□□□□ 0.32
NDUFS4-204ENST00000506974 DNMBPQ6XZF7 1577 aa17.02■□□□□ 0.32
NDUFS4-204ENST00000506974 URB2Q14146 1524 aaKnown RBP17.01■□□□□ 0.31
NDUFS4-204ENST00000506974 WDR62O43379 1518 aa17.01■□□□□ 0.31
NDUFS4-204ENST00000506974 TOPBP1Q92547 1522 aa16.98■□□□□ 0.31
NDUFS4-204ENST00000506974 FGD5Q6ZNL6 1462 aa16.88■□□□□ 0.29
NDUFS4-204ENST00000506974 POLA1P09884 1462 aaPredicted RBP16.86■□□□□ 0.29
NDUFS4-204ENST00000506974 WDR97A6NE52 1622 aa16.86■□□□□ 0.29
NDUFS4-204ENST00000506974 SLC4A2P04920 1241 aa16.86■□□□□ 0.29
NDUFS4-204ENST00000506974 TRIM41Q8WV44 630 aa16.86■□□□□ 0.29
NDUFS4-204ENST00000506974 DNAJC5Q9H3Z4 198 aa16.86■□□□□ 0.29
NDUFS4-204ENST00000506974 TARBP1Q13395 1621 aaKnown RBP16.82■□□□□ 0.28
NDUFS4-204ENST00000506974 RAD54L2Q9Y4B4 1467 aa16.77■□□□□ 0.28
NDUFS4-204ENST00000506974 ABCA10Q8WWZ4 1543 aa16.75■□□□□ 0.27
NDUFS4-204ENST00000506974 IFT140Q96RY7 1462 aa16.74■□□□□ 0.27
NDUFS4-204ENST00000506974 SOGA1O94964 1423 aa16.74■□□□□ 0.27
NDUFS4-204ENST00000506974 MYCNP04198 464 aaPredicted RBP16.73■□□□□ 0.27
NDUFS4-204ENST00000506974 ABCA5Q8WWZ7 1642 aa16.72■□□□□ 0.27
NDUFS4-204ENST00000506974 ATXN8OSP0DMR3 200 aa16.68■□□□□ 0.26
NDUFS4-204ENST00000506974 RUSC2Q8N2Y8 1516 aa16.67■□□□□ 0.26
NDUFS4-204ENST00000506974 PBRM1Q86U86 1689 aa16.67■□□□□ 0.26
NDUFS4-204ENST00000506974 EIF4G3O43432 1585 aaKnown RBP16.66■□□□□ 0.26
NDUFS4-204ENST00000506974 ZNF608Q9ULD9 1512 aaPredicted RBP16.64■□□□□ 0.25
NDUFS4-204ENST00000506974 EEA1Q15075 1411 aa16.62■□□□□ 0.25
NDUFS4-204ENST00000506974 KIF27Q86VH2 1401 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms