RNA–Protein interactions for RNA: ENST00000490806.5

KDM4C-210, Transcript of lysine demethylase 4C, humanhuman

TSL 3

Gene KDM4C, Length 793 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4C-210ENST00000490806 NISCHQ9Y2I1 1504 aa25.27■■□□□ 1.64
KDM4C-210ENST00000490806 CCDC180Q9P1Z9 1646 aa22.6■■□□□ 1.21
KDM4C-210ENST00000490806 ABCC9O60706 1549 aa22.54■■□□□ 1.2
KDM4C-210ENST00000490806 RB1CC1Q8TDY2 1594 aa21.48■■□□□ 1.03
KDM4C-210ENST00000490806 NACADO15069 1562 aa21.37■■□□□ 1.01
KDM4C-210ENST00000490806 DCAF8L2P0C7V8 631 aa21.21■□□□□ 0.99
KDM4C-210ENST00000490806 DNAJC5BQ9UF47 199 aa21.16■□□□□ 0.98
KDM4C-210ENST00000490806 MYO15BQ96JP2 1530 aa21.14■□□□□ 0.98
KDM4C-210ENST00000490806 UNC13AQ9UPW8 1703 aa21.02■□□□□ 0.96
KDM4C-210ENST00000490806 PABPN1Q86U42 306 aaKnown RBP eCLIP21.02■□□□□ 0.96
KDM4C-210ENST00000490806 ZCCHC6Q5VYS8 1495 aaKnown RBP20.96■□□□□ 0.95
KDM4C-210ENST00000490806 BICRAQ9NZM4 1560 aa20.92■□□□□ 0.94
KDM4C-210ENST00000490806 DCAF1Q9Y4B6 1507 aa20.89■□□□□ 0.94
KDM4C-210ENST00000490806 SHROOM4Q9ULL8 1493 aa20.61■□□□□ 0.89
KDM4C-210ENST00000490806 SCRIBQ14160 1630 aa20.6■□□□□ 0.89
KDM4C-210ENST00000490806 CC2D2AQ9P2K1 1620 aa20.38■□□□□ 0.85
KDM4C-210ENST00000490806 EIF4G1Q04637 1599 aaKnown RBP20.37■□□□□ 0.85
KDM4C-210ENST00000490806 CECR2Q9BXF3 1484 aa20.3■□□□□ 0.84
KDM4C-210ENST00000490806 NCAPD3P42695 1498 aa19.77■□□□□ 0.76
KDM4C-210ENST00000490806 ATAD2BQ9ULI0 1458 aa19.7■□□□□ 0.74
KDM4C-210ENST00000490806 SMARCA4P51532 1647 aa19.69■□□□□ 0.74
KDM4C-210ENST00000490806 SMARCA2P51531 1590 aa19.61■□□□□ 0.73
KDM4C-210ENST00000490806 HMGXB3Q12766 1538 aa19.6■□□□□ 0.73
KDM4C-210ENST00000490806 BAZ1AQ9NRL2 1556 aaPredicted RBP19.58■□□□□ 0.73
KDM4C-210ENST00000490806 PEG3Q9GZU2 1588 aa19.53■□□□□ 0.72
KDM4C-210ENST00000490806 MROH2BQ7Z745 1585 aa19.48■□□□□ 0.71
KDM4C-210ENST00000490806 BAZ1BQ9UIG0 1483 aaKnown RBP19.48■□□□□ 0.71
KDM4C-210ENST00000490806 NESP48681 1621 aa19.42■□□□□ 0.7
KDM4C-210ENST00000490806 ERCC6Q03468 1493 aa19.41■□□□□ 0.7
KDM4C-210ENST00000490806 CUX2O14529 1486 aa19.41■□□□□ 0.7
KDM4C-210ENST00000490806 DNAJC5Q9H3Z4 198 aa19.34■□□□□ 0.69
KDM4C-210ENST00000490806 LAMC3Q9Y6N6 1575 aa19.27■□□□□ 0.67
KDM4C-210ENST00000490806 WIZO95785 1651 aa19.23■□□□□ 0.67
KDM4C-210ENST00000490806 THOC2Q8NI27 1593 aaKnown RBP19.19■□□□□ 0.66
KDM4C-210ENST00000490806 CADPSQ9ULU8 1353 aa19.15■□□□□ 0.66
KDM4C-210ENST00000490806 PDS5BQ9NTI5 1447 aa19.15■□□□□ 0.66
KDM4C-210ENST00000490806 KIF21AQ7Z4S6 1674 aa19.13■□□□□ 0.65
KDM4C-210ENST00000490806 RSF1Q96T23 1441 aaPredicted RBP19.11■□□□□ 0.65
KDM4C-210ENST00000490806 MRC2Q9UBG0 1479 aa18.98■□□□□ 0.63
KDM4C-210ENST00000490806 TOP2AP11388 1531 aaKnown RBP18.98■□□□□ 0.63
KDM4C-210ENST00000490806 CFTRP13569 1480 aa18.97■□□□□ 0.63
KDM4C-210ENST00000490806 WDR62O43379 1518 aa18.96■□□□□ 0.63
KDM4C-210ENST00000490806 FANCD2Q9BXW9 1451 aa18.91■□□□□ 0.62
KDM4C-210ENST00000490806 CEP164Q9UPV0 1460 aa18.9■□□□□ 0.62
KDM4C-210ENST00000490806 CCDC88BA6NC98 1476 aa18.79■□□□□ 0.6
KDM4C-210ENST00000490806 URB2Q14146 1524 aaKnown RBP18.78■□□□□ 0.6
KDM4C-210ENST00000490806 PRDM2Q13029 1718 aa18.71■□□□□ 0.59
KDM4C-210ENST00000490806 TOPBP1Q92547 1522 aa18.57■□□□□ 0.56
KDM4C-210ENST00000490806 IFT140Q96RY7 1462 aa18.54■□□□□ 0.56
KDM4C-210ENST00000490806 ZNF608Q9ULD9 1512 aaPredicted RBP18.54■□□□□ 0.56
KDM4C-210ENST00000490806 OSCARQ8IYS5 282 aa18.52■□□□□ 0.56
KDM4C-210ENST00000490806 ABCC8Q09428 1581 aa18.51■□□□□ 0.55
KDM4C-210ENST00000490806 DNMBPQ6XZF7 1577 aa18.5■□□□□ 0.55
KDM4C-210ENST00000490806 TRIM41Q8WV44 630 aa18.45■□□□□ 0.54
KDM4C-210ENST00000490806 TARBP1Q13395 1621 aaKnown RBP18.42■□□□□ 0.54
KDM4C-210ENST00000490806 EIF4G3O43432 1585 aaKnown RBP18.4■□□□□ 0.54
KDM4C-210ENST00000490806 POLA1P09884 1462 aaPredicted RBP18.39■□□□□ 0.54
KDM4C-210ENST00000490806 AQRO60306 1485 aaKnown RBP eCLIP18.36■□□□□ 0.53
KDM4C-210ENST00000490806 RAD54L2Q9Y4B4 1467 aa18.33■□□□□ 0.52
KDM4C-210ENST00000490806 SOGA1O94964 1423 aa18.3■□□□□ 0.52
KDM4C-210ENST00000490806 CUX1P39880 1505 aa18.29■□□□□ 0.52
KDM4C-210ENST00000490806 RIMBP3CA6NJZ7 1639 aa18.27■□□□□ 0.52
KDM4C-210ENST00000490806 RIMBP3BA6NNM3 1639 aa18.27■□□□□ 0.52
KDM4C-210ENST00000490806 RIMBP3Q9UFD9 1639 aa18.27■□□□□ 0.52
KDM4C-210ENST00000490806 FGD5Q6ZNL6 1462 aa18.27■□□□□ 0.52
KDM4C-210ENST00000490806 TDRD9Q8NDG6 1382 aaKnown RBP18.26■□□□□ 0.51
KDM4C-210ENST00000490806 SUPT5HO00267 1087 aaKnown RBP18.24■□□□□ 0.51
KDM4C-210ENST00000490806 ARHGEF11O15085 1522 aa18.23■□□□□ 0.51
KDM4C-210ENST00000490806 CHD1O14646 1710 aa18.23■□□□□ 0.51
KDM4C-210ENST00000490806 WDR97A6NE52 1622 aa18.21■□□□□ 0.51
KDM4C-210ENST00000490806 SNAPC4Q5SXM2 1469 aa18.16■□□□□ 0.5
KDM4C-210ENST00000490806 FBLN2P98095 1184 aa18.16■□□□□ 0.5
KDM4C-210ENST00000490806 GRIN2BQ13224 1484 aa18.12■□□□□ 0.49
KDM4C-210ENST00000490806 MAGI1Q96QZ7 1491 aaPredicted RBP18.12■□□□□ 0.49
KDM4C-210ENST00000490806 ABCA10Q8WWZ4 1543 aa18.08■□□□□ 0.49
KDM4C-210ENST00000490806 CYB5RLQ6IPT4 315 aa18.08■□□□□ 0.48
KDM4C-210ENST00000490806 CLASP1Q7Z460 1538 aa18.08■□□□□ 0.48
KDM4C-210ENST00000490806 GAPVD1Q14C86 1478 aa18.07■□□□□ 0.48
KDM4C-210ENST00000490806 ARAP1Q96P48 1450 aa18.07■□□□□ 0.48
KDM4C-210ENST00000490806 SYNJ2O15056 1496 aa18.07■□□□□ 0.48
KDM4C-210ENST00000490806 CHMP7Q8WUX9 453 aaPredicted RBP18.06■□□□□ 0.48
KDM4C-210ENST00000490806 ABCA5Q8WWZ7 1642 aa18.05■□□□□ 0.48
KDM4C-210ENST00000490806 PBRM1Q86U86 1689 aa18.03■□□□□ 0.48
KDM4C-210ENST00000490806 SYNJ1O43426 1573 aa18.02■□□□□ 0.48
KDM4C-210ENST00000490806 TOP2BQ02880 1626 aa18.01■□□□□ 0.47
KDM4C-210ENST00000490806 WRNQ14191 1432 aaPredicted RBP eCLIP18■□□□□ 0.47
KDM4C-210ENST00000490806 BIVM-ERCC5R4GMW8 1640 aa18■□□□□ 0.47
KDM4C-210ENST00000490806 GRIN2AQ12879 1464 aa17.9■□□□□ 0.46
KDM4C-210ENST00000490806 ADAMTS12P58397 1594 aa17.89■□□□□ 0.45
KDM4C-210ENST00000490806 NUP160Q12769 1436 aa17.87■□□□□ 0.45
KDM4C-210ENST00000490806 FHAD1B1AJZ9 1412 aa17.85■□□□□ 0.45
KDM4C-210ENST00000490806 ERICH3Q5RHP9 1530 aa17.85■□□□□ 0.45
KDM4C-210ENST00000490806 CEP170Q5SW79 1584 aa17.84■□□□□ 0.45
KDM4C-210ENST00000490806 TRHP20396 242 aaPredicted RBP17.81■□□□□ 0.44
KDM4C-210ENST00000490806 ERCC6L2Q5T890 1561 aa17.81■□□□□ 0.44
KDM4C-210ENST00000490806 SHROOM2Q13796 1616 aa17.76■□□□□ 0.43
KDM4C-210ENST00000490806 IGF1RP08069 1367 aa17.67■□□□□ 0.42
KDM4C-210ENST00000490806 JPH4Q96JJ6 628 aa17.65■□□□□ 0.42
KDM4C-210ENST00000490806 RUSC2Q8N2Y8 1516 aa17.65■□□□□ 0.42
KDM4C-210ENST00000490806 PRG4Q92954 1404 aaPredicted RBP17.64■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms