RNA–Protein interactions for RNA: ENST00000296684.9

NDUFS4-201, Transcript of NADH:ubiquinone oxidoreductase subunit S4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDUFS4, Length 675 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4-201ENST00000296684 CHIC1Q5VXU3 224 aa24.16■■□□□ 1.46
NDUFS4-201ENST00000296684 AEBP2Q6ZN18 517 aaPredicted RBP23.94■■□□□ 1.42
NDUFS4-201ENST00000296684 NISCHQ9Y2I1 1504 aa23.73■■□□□ 1.39
NDUFS4-201ENST00000296684 PHF23Q9BUL5 403 aaPredicted RBP21.45■■□□□ 1.02
NDUFS4-201ENST00000296684 CCDC180Q9P1Z9 1646 aa21.11■□□□□ 0.97
NDUFS4-201ENST00000296684 ABCC9O60706 1549 aa20.59■□□□□ 0.89
NDUFS4-201ENST00000296684 SENP3Q9H4L4 574 aaPredicted RBP20.01■□□□□ 0.79
NDUFS4-201ENST00000296684 PLPPR3Q6T4P5 718 aa19.98■□□□□ 0.79
NDUFS4-201ENST00000296684 RB1CC1Q8TDY2 1594 aa19.87■□□□□ 0.77
NDUFS4-201ENST00000296684 NACADO15069 1562 aa19.87■□□□□ 0.77
NDUFS4-201ENST00000296684 DCAF8L2P0C7V8 631 aa19.82■□□□□ 0.76
NDUFS4-201ENST00000296684 MYO15BQ96JP2 1530 aa19.78■□□□□ 0.76
NDUFS4-201ENST00000296684 ZCCHC6Q5VYS8 1495 aaKnown RBP19.75■□□□□ 0.75
NDUFS4-201ENST00000296684 DCAF1Q9Y4B6 1507 aa19.68■□□□□ 0.74
NDUFS4-201ENST00000296684 UNC13AQ9UPW8 1703 aa19.37■□□□□ 0.69
NDUFS4-201ENST00000296684 PABPN1Q86U42 306 aaKnown RBP eCLIP19.24■□□□□ 0.67
NDUFS4-201ENST00000296684 BICRAQ9NZM4 1560 aa19.22■□□□□ 0.67
NDUFS4-201ENST00000296684 SCRIBQ14160 1630 aa19.18■□□□□ 0.66
NDUFS4-201ENST00000296684 SHROOM4Q9ULL8 1493 aa19.1■□□□□ 0.65
NDUFS4-201ENST00000296684 DNAJC5BQ9UF47 199 aa18.9■□□□□ 0.62
NDUFS4-201ENST00000296684 ADRA2BP18089 450 aa18.89■□□□□ 0.61
NDUFS4-201ENST00000296684 EIF4G1Q04637 1599 aaKnown RBP18.72■□□□□ 0.59
NDUFS4-201ENST00000296684 PPP6R1Q9UPN7 881 aa18.67■□□□□ 0.58
NDUFS4-201ENST00000296684 CC2D2AQ9P2K1 1620 aa18.65■□□□□ 0.58
NDUFS4-201ENST00000296684 FOXD1Q16676 465 aa18.58■□□□□ 0.56
NDUFS4-201ENST00000296684 CECR2Q9BXF3 1484 aa18.52■□□□□ 0.56
NDUFS4-201ENST00000296684 KCNA4P22459 653 aa18.49■□□□□ 0.55
NDUFS4-201ENST00000296684 BAZ1AQ9NRL2 1556 aaPredicted RBP18.4■□□□□ 0.54
NDUFS4-201ENST00000296684 SMARCA4P51532 1647 aa18.39■□□□□ 0.53
NDUFS4-201ENST00000296684 EHMT2Q96KQ7 1210 aa18.38■□□□□ 0.53
NDUFS4-201ENST00000296684 NCAPD3P42695 1498 aa18.33■□□□□ 0.53
NDUFS4-201ENST00000296684 SMARCA2P51531 1590 aa18.31■□□□□ 0.52
NDUFS4-201ENST00000296684 ATAD2BQ9ULI0 1458 aa18.31■□□□□ 0.52
NDUFS4-201ENST00000296684 MROH2BQ7Z745 1585 aa18.25■□□□□ 0.51
NDUFS4-201ENST00000296684 PEG3Q9GZU2 1588 aa18.25■□□□□ 0.51
NDUFS4-201ENST00000296684 HMGXB3Q12766 1538 aa18.22■□□□□ 0.51
NDUFS4-201ENST00000296684 BAZ1BQ9UIG0 1483 aaKnown RBP18.15■□□□□ 0.5
NDUFS4-201ENST00000296684 RSF1Q96T23 1441 aaPredicted RBP18.06■□□□□ 0.48
NDUFS4-201ENST00000296684 WIZO95785 1651 aa18.05■□□□□ 0.48
NDUFS4-201ENST00000296684 TOP2AP11388 1531 aaKnown RBP17.88■□□□□ 0.45
NDUFS4-201ENST00000296684 LAMC3Q9Y6N6 1575 aa17.84■□□□□ 0.45
NDUFS4-201ENST00000296684 PPP4R3CPQ6ZMV5 832 aa17.81■□□□□ 0.44
NDUFS4-201ENST00000296684 NESP48681 1621 aa17.8■□□□□ 0.44
NDUFS4-201ENST00000296684 CADPSQ9ULU8 1353 aa17.79■□□□□ 0.44
NDUFS4-201ENST00000296684 ERCC6Q03468 1493 aa17.77■□□□□ 0.44
NDUFS4-201ENST00000296684 PDS5BQ9NTI5 1447 aa17.73■□□□□ 0.43
NDUFS4-201ENST00000296684 PIAS4Q8N2W9 510 aaPredicted RBP17.73■□□□□ 0.43
NDUFS4-201ENST00000296684 SLC4A1APQ9BWU0 796 aaKnown RBP17.72■□□□□ 0.43
NDUFS4-201ENST00000296684 CSRNP3Q8WYN3 585 aa17.68■□□□□ 0.42
NDUFS4-201ENST00000296684 CCDC88BA6NC98 1476 aa17.68■□□□□ 0.42
NDUFS4-201ENST00000296684 CFTRP13569 1480 aa17.67■□□□□ 0.42
NDUFS4-201ENST00000296684 CUX2O14529 1486 aa17.63■□□□□ 0.41
NDUFS4-201ENST00000296684 KIF21AQ7Z4S6 1674 aa17.61■□□□□ 0.41
NDUFS4-201ENST00000296684 SUPT5HO00267 1087 aaKnown RBP17.6■□□□□ 0.41
NDUFS4-201ENST00000296684 THOC2Q8NI27 1593 aaKnown RBP17.55■□□□□ 0.4
NDUFS4-201ENST00000296684 FANCD2Q9BXW9 1451 aa17.55■□□□□ 0.4
NDUFS4-201ENST00000296684 CEP164Q9UPV0 1460 aa17.54■□□□□ 0.4
NDUFS4-201ENST00000296684 PRDM2Q13029 1718 aa17.53■□□□□ 0.4
NDUFS4-201ENST00000296684 MRC2Q9UBG0 1479 aa17.51■□□□□ 0.39
NDUFS4-201ENST00000296684 NCBP3Q53F19 620 aaKnown RBP17.5■□□□□ 0.39
NDUFS4-201ENST00000296684 WDR62O43379 1518 aa17.44■□□□□ 0.38
NDUFS4-201ENST00000296684 URB2Q14146 1524 aaKnown RBP17.36■□□□□ 0.37
NDUFS4-201ENST00000296684 ABCC8Q09428 1581 aa17.36■□□□□ 0.37
NDUFS4-201ENST00000296684 NPM3O75607 178 aaKnown RBP17.35■□□□□ 0.37
NDUFS4-201ENST00000296684 TOPBP1Q92547 1522 aa17.27■□□□□ 0.36
NDUFS4-201ENST00000296684 DNMBPQ6XZF7 1577 aa17.26■□□□□ 0.35
NDUFS4-201ENST00000296684 IFT140Q96RY7 1462 aa17.18■□□□□ 0.34
NDUFS4-201ENST00000296684 CUX1P39880 1505 aa17.12■□□□□ 0.33
NDUFS4-201ENST00000296684 POLA1P09884 1462 aaPredicted RBP17.12■□□□□ 0.33
NDUFS4-201ENST00000296684 DNAJC5Q9H3Z4 198 aa17.09■□□□□ 0.33
NDUFS4-201ENST00000296684 SOGA1O94964 1423 aa17.09■□□□□ 0.33
NDUFS4-201ENST00000296684 TARBP1Q13395 1621 aaKnown RBP17.08■□□□□ 0.32
NDUFS4-201ENST00000296684 FGD5Q6ZNL6 1462 aa17.07■□□□□ 0.32
NDUFS4-201ENST00000296684 ZBTB22O15209 634 aa17.05■□□□□ 0.32
NDUFS4-201ENST00000296684 ZNF608Q9ULD9 1512 aaPredicted RBP17.05■□□□□ 0.32
NDUFS4-201ENST00000296684 WRNQ14191 1432 aaPredicted RBP eCLIP17.04■□□□□ 0.32
NDUFS4-201ENST00000296684 CNKSR2Q8WXI2 1034 aa17.03■□□□□ 0.32
NDUFS4-201ENST00000296684 RAD54L2Q9Y4B4 1467 aa17.02■□□□□ 0.32
NDUFS4-201ENST00000296684 WDR97A6NE52 1622 aa17.01■□□□□ 0.31
NDUFS4-201ENST00000296684 TOP2BQ02880 1626 aa17■□□□□ 0.31
NDUFS4-201ENST00000296684 BIVM-ERCC5R4GMW8 1640 aa17■□□□□ 0.31
NDUFS4-201ENST00000296684 EIF4G3O43432 1585 aaKnown RBP16.98■□□□□ 0.31
NDUFS4-201ENST00000296684 AQRO60306 1485 aaKnown RBP eCLIP16.98■□□□□ 0.31
NDUFS4-201ENST00000296684 SYNJ1O43426 1573 aa16.95■□□□□ 0.3
NDUFS4-201ENST00000296684 TDRD9Q8NDG6 1382 aaKnown RBP16.94■□□□□ 0.3
NDUFS4-201ENST00000296684 ABCA10Q8WWZ4 1543 aa16.94■□□□□ 0.3
NDUFS4-201ENST00000296684 OSCARQ8IYS5 282 aa16.92■□□□□ 0.3
NDUFS4-201ENST00000296684 SCAF1Q9H7N4 1312 aaKnown RBP16.91■□□□□ 0.3
NDUFS4-201ENST00000296684 GRIN2BQ13224 1484 aa16.88■□□□□ 0.29
NDUFS4-201ENST00000296684 GAPVD1Q14C86 1478 aa16.87■□□□□ 0.29
NDUFS4-201ENST00000296684 MAGI1Q96QZ7 1491 aaPredicted RBP16.84■□□□□ 0.29
NDUFS4-201ENST00000296684 ABCA5Q8WWZ7 1642 aa16.84■□□□□ 0.29
NDUFS4-201ENST00000296684 MSH5O43196 834 aa16.82■□□□□ 0.28
NDUFS4-201ENST00000296684 PBRM1Q86U86 1689 aa16.81■□□□□ 0.28
NDUFS4-201ENST00000296684 SNAPC4Q5SXM2 1469 aa16.8■□□□□ 0.28
NDUFS4-201ENST00000296684 FBLN2P98095 1184 aa16.79■□□□□ 0.28
NDUFS4-201ENST00000296684 CHMP7Q8WUX9 453 aaPredicted RBP16.78■□□□□ 0.28
NDUFS4-201ENST00000296684 CHD1O14646 1710 aa16.78■□□□□ 0.28
NDUFS4-201ENST00000296684 SYNJ2O15056 1496 aa16.76■□□□□ 0.27
NDUFS4-201ENST00000296684 MAPK8IP2Q13387 824 aaPredicted RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms