RNA–Protein interactions for RNA: ENST00000412198.5

ZSWIM8-202, Transcript of zinc finger SWIM-type containing 8, humanhuman

TSL 2

Gene ZSWIM8, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM8-202ENST00000412198 NISCHQ9Y2I1 1504 aa24.88■■□□□ 1.57
ZSWIM8-202ENST00000412198 DCAF8L2P0C7V8 631 aa22.52■■□□□ 1.2
ZSWIM8-202ENST00000412198 SHROOM4Q9ULL8 1493 aa22.05■■□□□ 1.12
ZSWIM8-202ENST00000412198 SUPT5HO00267 1087 aaKnown RBP21.55■■□□□ 1.04
ZSWIM8-202ENST00000412198 ABCC9O60706 1549 aa20.96■□□□□ 0.95
ZSWIM8-202ENST00000412198 CCDC180Q9P1Z9 1646 aa20.88■□□□□ 0.93
ZSWIM8-202ENST00000412198 ZCCHC6Q5VYS8 1495 aaKnown RBP20.79■□□□□ 0.92
ZSWIM8-202ENST00000412198 EHMT2Q96KQ7 1210 aa20.36■□□□□ 0.85
ZSWIM8-202ENST00000412198 PABPN1Q86U42 306 aaKnown RBP eCLIP20.32■□□□□ 0.841e-6■■■■□ 24.5
ZSWIM8-202ENST00000412198 SCRIBQ14160 1630 aa20.29■□□□□ 0.84
ZSWIM8-202ENST00000412198 FAM9AQ8IZU1 332 aaPredicted RBP20.12■□□□□ 0.81
ZSWIM8-202ENST00000412198 CHIC1Q5VXU3 224 aa20.04■□□□□ 0.8
ZSWIM8-202ENST00000412198 DCAF1Q9Y4B6 1507 aa19.93■□□□□ 0.78
ZSWIM8-202ENST00000412198 TRIM41Q8WV44 630 aa19.86■□□□□ 0.77
ZSWIM8-202ENST00000412198 LOC105371045A0A1W2PR82 267 aa19.83■□□□□ 0.77
ZSWIM8-202ENST00000412198 NACADO15069 1562 aa19.77■□□□□ 0.76
ZSWIM8-202ENST00000412198 CECR2Q9BXF3 1484 aa19.75■□□□□ 0.75
ZSWIM8-202ENST00000412198 RB1CC1Q8TDY2 1594 aa19.73■□□□□ 0.75
ZSWIM8-202ENST00000412198 RSF1Q96T23 1441 aaPredicted RBP19.69■□□□□ 0.74
ZSWIM8-202ENST00000412198 MYO15BQ96JP2 1530 aa19.48■□□□□ 0.71
ZSWIM8-202ENST00000412198 TTBK1Q5TCY1 1321 aaPredicted RBP19.48■□□□□ 0.71
ZSWIM8-202ENST00000412198 MROH2BQ7Z745 1585 aa19.47■□□□□ 0.71
ZSWIM8-202ENST00000412198 RANGAP1P46060 587 aaPredicted RBP19.47■□□□□ 0.71
ZSWIM8-202ENST00000412198 PCGF6Q9BYE7 350 aa19.44■□□□□ 0.7
ZSWIM8-202ENST00000412198 PPARGC1BQ86YN6 1023 aaKnown RBP19.42■□□□□ 0.7
ZSWIM8-202ENST00000412198 WIZO95785 1651 aa19.28■□□□□ 0.68
ZSWIM8-202ENST00000412198 UBTFP17480 764 aaKnown RBP19.23■□□□□ 0.67
ZSWIM8-202ENST00000412198 BAZ1AQ9NRL2 1556 aaPredicted RBP19.17■□□□□ 0.66
ZSWIM8-202ENST00000412198 CCDC88BA6NC98 1476 aa19.01■□□□□ 0.63
ZSWIM8-202ENST00000412198 SMARCA4P51532 1647 aa18.97■□□□□ 0.63
ZSWIM8-202ENST00000412198 BAZ1BQ9UIG0 1483 aaKnown RBP18.95■□□□□ 0.62
ZSWIM8-202ENST00000412198 UNC13AQ9UPW8 1703 aa18.94■□□□□ 0.62
ZSWIM8-202ENST00000412198 BICRAQ9NZM4 1560 aa18.94■□□□□ 0.62
ZSWIM8-202ENST00000412198 ABCC8Q09428 1581 aa18.92■□□□□ 0.62
ZSWIM8-202ENST00000412198 CSRNP3Q8WYN3 585 aa18.83■□□□□ 0.61
ZSWIM8-202ENST00000412198 ATAD2BQ9ULI0 1458 aa18.83■□□□□ 0.6
ZSWIM8-202ENST00000412198 TOP2AP11388 1531 aaKnown RBP18.81■□□□□ 0.6
ZSWIM8-202ENST00000412198 ATP1B4Q9UN42 357 aaPredicted RBP18.79■□□□□ 0.6
ZSWIM8-202ENST00000412198 APLP2Q06481 763 aa18.77■□□□□ 0.6
ZSWIM8-202ENST00000412198 TRIM26Q12899 539 aaPredicted RBP18.77■□□□□ 0.6
ZSWIM8-202ENST00000412198 SOGA1O94964 1423 aa18.76■□□□□ 0.59
ZSWIM8-202ENST00000412198 WRNQ14191 1432 aaPredicted RBP eCLIP18.71■□□□□ 0.593e-7■■■■□ 25.1
ZSWIM8-202ENST00000412198 SMARCA2P51531 1590 aa18.7■□□□□ 0.58
ZSWIM8-202ENST00000412198 DNAJC5BQ9UF47 199 aa18.66■□□□□ 0.58
ZSWIM8-202ENST00000412198 RUSC2Q8N2Y8 1516 aa18.63■□□□□ 0.57
ZSWIM8-202ENST00000412198 EIF4G1Q04637 1599 aaKnown RBP18.61■□□□□ 0.57
ZSWIM8-202ENST00000412198 P3H3Q8IVL6 736 aa18.57■□□□□ 0.56
ZSWIM8-202ENST00000412198 HRCP23327 699 aa18.55■□□□□ 0.56
ZSWIM8-202ENST00000412198 HNRNPUL2Q1KMD3 747 aaKnown RBP18.53■□□□□ 0.56
ZSWIM8-202ENST00000412198 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.51■□□□□ 0.55
ZSWIM8-202ENST00000412198 CCER1Q8TC90 406 aaPredicted RBP18.51■□□□□ 0.55
ZSWIM8-202ENST00000412198 ITGAEP38570 1179 aa18.49■□□□□ 0.55
ZSWIM8-202ENST00000412198 NCAPD3P42695 1498 aa18.42■□□□□ 0.54
ZSWIM8-202ENST00000412198 CEP162Q5TB80 1403 aa18.4■□□□□ 0.54
ZSWIM8-202ENST00000412198 ARID3CA6NKF2 412 aa18.35■□□□□ 0.53
ZSWIM8-202ENST00000412198 FBLN2P98095 1184 aa18.35■□□□□ 0.53
ZSWIM8-202ENST00000412198 CC2D2AQ9P2K1 1620 aa18.35■□□□□ 0.53
ZSWIM8-202ENST00000412198 CADPSQ9ULU8 1353 aa18.35■□□□□ 0.53
ZSWIM8-202ENST00000412198 NESP48681 1621 aa18.31■□□□□ 0.52
ZSWIM8-202ENST00000412198 SYNJ1O43426 1573 aa18.3■□□□□ 0.52
ZSWIM8-202ENST00000412198 GOLGA3Q08378 1498 aa18.28■□□□□ 0.52
ZSWIM8-202ENST00000412198 CLIP1P30622 1438 aa18.27■□□□□ 0.52
ZSWIM8-202ENST00000412198 TNIKQ9UKE5 1360 aa18.25■□□□□ 0.51
ZSWIM8-202ENST00000412198 CUX2O14529 1486 aa18.25■□□□□ 0.51
ZSWIM8-202ENST00000412198 PEG3Q9GZU2 1588 aa18.24■□□□□ 0.51
ZSWIM8-202ENST00000412198 EEA1Q15075 1411 aa18.23■□□□□ 0.51
ZSWIM8-202ENST00000412198 RAPGEF2Q9Y4G8 1499 aa18.23■□□□□ 0.51
ZSWIM8-202ENST00000412198 KIF27Q86VH2 1401 aa18.22■□□□□ 0.51
ZSWIM8-202ENST00000412198 PELP1Q8IZL8 1130 aaKnown RBP18.22■□□□□ 0.51
ZSWIM8-202ENST00000412198 TDRD9Q8NDG6 1382 aaKnown RBP18.2■□□□□ 0.5
ZSWIM8-202ENST00000412198 CEP164Q9UPV0 1460 aa18.19■□□□□ 0.5
ZSWIM8-202ENST00000412198 FANCD2Q9BXW9 1451 aa18.17■□□□□ 0.5
ZSWIM8-202ENST00000412198 CFTRP13569 1480 aa18.16■□□□□ 0.5
ZSWIM8-202ENST00000412198 HMGXB3Q12766 1538 aa18.15■□□□□ 0.5
ZSWIM8-202ENST00000412198 FAM50AQ14320 339 aaKnown RBP18.12■□□□□ 0.49
ZSWIM8-202ENST00000412198 RAD54L2Q9Y4B4 1467 aa18.12■□□□□ 0.49
ZSWIM8-202ENST00000412198 CARMIL1Q5VZK9 1371 aa18.09■□□□□ 0.49
ZSWIM8-202ENST00000412198 CUX1P39880 1505 aa18.09■□□□□ 0.49
ZSWIM8-202ENST00000412198 ZEB1P37275 1124 aaPredicted RBP18.08■□□□□ 0.49
ZSWIM8-202ENST00000412198 FGD5Q6ZNL6 1462 aa18.06■□□□□ 0.48
ZSWIM8-202ENST00000412198 KANK4Q5T7N3 995 aaPredicted RBP18.04■□□□□ 0.48
ZSWIM8-202ENST00000412198 ERCC6Q03468 1493 aa18.01■□□□□ 0.47
ZSWIM8-202ENST00000412198 PDS5BQ9NTI5 1447 aa18.01■□□□□ 0.47
ZSWIM8-202ENST00000412198 IGF1RP08069 1367 aa17.99■□□□□ 0.47
ZSWIM8-202ENST00000412198 TOP2BQ02880 1626 aa17.96■□□□□ 0.47
ZSWIM8-202ENST00000412198 CHMP7Q8WUX9 453 aaPredicted RBP17.93■□□□□ 0.46
ZSWIM8-202ENST00000412198 VPS8Q8N3P4 1428 aa17.89■□□□□ 0.45
ZSWIM8-202ENST00000412198 AQRO60306 1485 aaKnown RBP eCLIP17.85■□□□□ 0.452e-7■■■■□ 21.2
ZSWIM8-202ENST00000412198 TOPBP1Q92547 1522 aa17.84■□□□□ 0.45
ZSWIM8-202ENST00000412198 POLA1P09884 1462 aaPredicted RBP17.84■□□□□ 0.45
ZSWIM8-202ENST00000412198 FHOD3Q2V2M9 1422 aa17.82■□□□□ 0.44
ZSWIM8-202ENST00000412198 NEUROD1Q13562 356 aa17.81■□□□□ 0.44
ZSWIM8-202ENST00000412198 PRXQ9BXM0 1461 aa17.79■□□□□ 0.44
ZSWIM8-202ENST00000412198 CHIC2Q9UKJ5 165 aa17.78■□□□□ 0.44
ZSWIM8-202ENST00000412198 ZNF777Q9ULD5 760 aaPredicted RBP17.76■□□□□ 0.43
ZSWIM8-202ENST00000412198 KIF21BO75037 1637 aa17.75■□□□□ 0.43
ZSWIM8-202ENST00000412198 URB2Q14146 1524 aaKnown RBP17.75■□□□□ 0.43
ZSWIM8-202ENST00000412198 ARAP1Q96P48 1450 aa17.75■□□□□ 0.43
ZSWIM8-202ENST00000412198 GAPVD1Q14C86 1478 aa17.73■□□□□ 0.43
ZSWIM8-202ENST00000412198 MTUS2Q5JR59 1369 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms