Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
LINC00479Q96M42 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC19.77■□□□□ 0.76
LINC00479Q96M42 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LINC00479Q96M42 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
LINC00479Q96M42 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LINC00479Q96M42 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC19.76■□□□□ 0.75
LINC00479Q96M42 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LINC00479Q96M42 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC19.75■□□□□ 0.75
LINC00479Q96M42 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LINC00479Q96M42 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
LINC00479Q96M42 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LINC00479Q96M42 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LINC00479Q96M42 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LINC00479Q96M42 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LINC00479Q96M42 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LINC00479Q96M42 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
LINC00479Q96M42 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
LINC00479Q96M42 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
LINC00479Q96M42 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC19.73■□□□□ 0.75
LINC00479Q96M42 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
LINC00479Q96M42 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LINC00479Q96M42 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC19.72■□□□□ 0.75
LINC00479Q96M42 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LINC00479Q96M42 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC19.71■□□□□ 0.75
LINC00479Q96M42 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
LINC00479Q96M42 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LINC00479Q96M42 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LINC00479Q96M42 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC19.7■□□□□ 0.74
LINC00479Q96M42 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC19.69■□□□□ 0.74
LINC00479Q96M42 WASH5P-204ENST00000632292 975 ntBASIC19.69■□□□□ 0.74
LINC00479Q96M42 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LINC00479Q96M42 AC010864.1-201ENST00000609407 1511 ntBASIC19.68■□□□□ 0.74
LINC00479Q96M42 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LINC00479Q96M42 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
LINC00479Q96M42 BX255925.1-201ENST00000566954 1854 ntBASIC19.67■□□□□ 0.74
LINC00479Q96M42 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC19.67■□□□□ 0.74
LINC00479Q96M42 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LINC00479Q96M42 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC19.66■□□□□ 0.74
LINC00479Q96M42 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
LINC00479Q96M42 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LINC00479Q96M42 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LINC00479Q96M42 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LINC00479Q96M42 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
LINC00479Q96M42 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC19.64■□□□□ 0.73
LINC00479Q96M42 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
LINC00479Q96M42 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
LINC00479Q96M42 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
LINC00479Q96M42 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.64■□□□□ 0.73
LINC00479Q96M42 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LINC00479Q96M42 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LINC00479Q96M42 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
LINC00479Q96M42 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
LINC00479Q96M42 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC19.63■□□□□ 0.73
LINC00479Q96M42 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LINC00479Q96M42 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
LINC00479Q96M42 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC19.62■□□□□ 0.73
LINC00479Q96M42 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
LINC00479Q96M42 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
LINC00479Q96M42 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LINC00479Q96M42 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LINC00479Q96M42 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LINC00479Q96M42 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LINC00479Q96M42 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LINC00479Q96M42 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LINC00479Q96M42 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
LINC00479Q96M42 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
LINC00479Q96M42 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
LINC00479Q96M42 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
LINC00479Q96M42 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LINC00479Q96M42 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LINC00479Q96M42 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LINC00479Q96M42 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LINC00479Q96M42 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC19.6■□□□□ 0.73
LINC00479Q96M42 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
LINC00479Q96M42 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC19.59■□□□□ 0.73
LINC00479Q96M42 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LINC00479Q96M42 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
LINC00479Q96M42 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LINC00479Q96M42 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
LINC00479Q96M42 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
LINC00479Q96M42 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC19.58■□□□□ 0.72
LINC00479Q96M42 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
LINC00479Q96M42 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC19.57■□□□□ 0.72
LINC00479Q96M42 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LINC00479Q96M42 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC19.57■□□□□ 0.72
LINC00479Q96M42 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
LINC00479Q96M42 PKM-203ENST00000389093 2279 ntTSL 5 BASIC19.56■□□□□ 0.72
LINC00479Q96M42 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC19.56■□□□□ 0.72
LINC00479Q96M42 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LINC00479Q96M42 PROC-203ENST00000409048 1586 ntTSL 5 BASIC19.55■□□□□ 0.72
LINC00479Q96M42 SHF-208ENST00000560734 1731 ntTSL 3 BASIC19.55■□□□□ 0.72
LINC00479Q96M42 AL449106.1-201ENST00000608517 1980 ntBASIC19.55■□□□□ 0.72
LINC00479Q96M42 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
LINC00479Q96M42 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
LINC00479Q96M42 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
LINC00479Q96M42 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LINC00479Q96M42 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
LINC00479Q96M42 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
LINC00479Q96M42 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC19.54■□□□□ 0.72
LINC00479Q96M42 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms