Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 SETD8P1-201ENST00000623146 1180 ntBASIC24.32■■□□□ 1.48
SLC47A1Q96FL8 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC24.32■■□□□ 1.48
SLC47A1Q96FL8 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SLC47A1Q96FL8 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SLC47A1Q96FL8 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SLC47A1Q96FL8 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC24.29■■□□□ 1.48
SLC47A1Q96FL8 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SLC47A1Q96FL8 AC010864.1-201ENST00000609407 1511 ntBASIC24.29■■□□□ 1.48
SLC47A1Q96FL8 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC24.29■■□□□ 1.48
SLC47A1Q96FL8 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SLC47A1Q96FL8 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
SLC47A1Q96FL8 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SLC47A1Q96FL8 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
SLC47A1Q96FL8 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC24.27■■□□□ 1.48
SLC47A1Q96FL8 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC24.27■■□□□ 1.48
SLC47A1Q96FL8 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
SLC47A1Q96FL8 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SLC47A1Q96FL8 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
SLC47A1Q96FL8 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
SLC47A1Q96FL8 CREM-210ENST00000374721 2020 ntTSL 5 BASIC24.25■■□□□ 1.47
SLC47A1Q96FL8 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
SLC47A1Q96FL8 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
SLC47A1Q96FL8 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SLC47A1Q96FL8 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SLC47A1Q96FL8 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
SLC47A1Q96FL8 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
SLC47A1Q96FL8 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SLC47A1Q96FL8 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC24.24■■□□□ 1.47
SLC47A1Q96FL8 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SLC47A1Q96FL8 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC24.23■■□□□ 1.47
SLC47A1Q96FL8 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
SLC47A1Q96FL8 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
SLC47A1Q96FL8 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
SLC47A1Q96FL8 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC24.22■■□□□ 1.47
SLC47A1Q96FL8 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
SLC47A1Q96FL8 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
SLC47A1Q96FL8 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
SLC47A1Q96FL8 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
SLC47A1Q96FL8 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
SLC47A1Q96FL8 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
SLC47A1Q96FL8 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
SLC47A1Q96FL8 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
SLC47A1Q96FL8 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
SLC47A1Q96FL8 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
SLC47A1Q96FL8 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
SLC47A1Q96FL8 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC24.2■■□□□ 1.46
SLC47A1Q96FL8 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC24.19■■□□□ 1.46
SLC47A1Q96FL8 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
SLC47A1Q96FL8 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
SLC47A1Q96FL8 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
SLC47A1Q96FL8 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
SLC47A1Q96FL8 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
SLC47A1Q96FL8 BX255925.1-201ENST00000566954 1854 ntBASIC24.17■■□□□ 1.46
SLC47A1Q96FL8 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC24.17■■□□□ 1.46
SLC47A1Q96FL8 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
SLC47A1Q96FL8 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
SLC47A1Q96FL8 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SLC47A1Q96FL8 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SLC47A1Q96FL8 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC24.16■■□□□ 1.46
SLC47A1Q96FL8 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SLC47A1Q96FL8 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
SLC47A1Q96FL8 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC24.15■■□□□ 1.46
SLC47A1Q96FL8 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC24.14■■□□□ 1.45
SLC47A1Q96FL8 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SLC47A1Q96FL8 SHF-207ENST00000560540 2062 ntTSL 5 BASIC24.13■■□□□ 1.45
SLC47A1Q96FL8 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC24.13■■□□□ 1.45
SLC47A1Q96FL8 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC24.13■■□□□ 1.45
SLC47A1Q96FL8 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
SLC47A1Q96FL8 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC24.11■■□□□ 1.45
SLC47A1Q96FL8 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SLC47A1Q96FL8 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
SLC47A1Q96FL8 PROC-203ENST00000409048 1586 ntTSL 5 BASIC24.1■■□□□ 1.45
SLC47A1Q96FL8 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC24.1■■□□□ 1.45
SLC47A1Q96FL8 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
SLC47A1Q96FL8 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
SLC47A1Q96FL8 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC24.09■■□□□ 1.45
SLC47A1Q96FL8 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC24.09■■□□□ 1.45
SLC47A1Q96FL8 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
SLC47A1Q96FL8 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
SLC47A1Q96FL8 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
SLC47A1Q96FL8 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
SLC47A1Q96FL8 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.45
SLC47A1Q96FL8 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
SLC47A1Q96FL8 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
SLC47A1Q96FL8 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
SLC47A1Q96FL8 AC097358.2-201ENST00000607541 1159 ntBASIC24.07■■□□□ 1.44
SLC47A1Q96FL8 AL391121.1-201ENST00000607967 1349 ntBASIC24.07■■□□□ 1.44
SLC47A1Q96FL8 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
SLC47A1Q96FL8 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SLC47A1Q96FL8 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SLC47A1Q96FL8 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC24.06■■□□□ 1.44
SLC47A1Q96FL8 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
SLC47A1Q96FL8 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SLC47A1Q96FL8 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC24.06■■□□□ 1.44
SLC47A1Q96FL8 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
SLC47A1Q96FL8 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
SLC47A1Q96FL8 EBPL-202ENST00000378268 680 ntTSL 3 BASIC24.05■■□□□ 1.44
SLC47A1Q96FL8 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
SLC47A1Q96FL8 AP004833.2-201ENST00000532228 1454 ntBASIC24.05■■□□□ 1.44
SLC47A1Q96FL8 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC24.05■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms