Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC31.25■■■□□ 2.59
SLC47A1Q96FL8 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC31.25■■■□□ 2.59
SLC47A1Q96FL8 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
SLC47A1Q96FL8 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC30.85■■■□□ 2.53
SLC47A1Q96FL8 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC30.73■■■□□ 2.51
SLC47A1Q96FL8 HES6-203ENST00000409160 1600 ntTSL 2 BASIC30.7■■■□□ 2.51
SLC47A1Q96FL8 AL356512.1-201ENST00000607453 1739 ntBASIC30.49■■■□□ 2.47
SLC47A1Q96FL8 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
SLC47A1Q96FL8 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC30.39■■■□□ 2.45
SLC47A1Q96FL8 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC30.19■■■□□ 2.42
SLC47A1Q96FL8 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC30.08■■■□□ 2.41
SLC47A1Q96FL8 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
SLC47A1Q96FL8 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC30.03■■■□□ 2.4
SLC47A1Q96FL8 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC29.95■■■□□ 2.39
SLC47A1Q96FL8 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC29.79■■■□□ 2.36
SLC47A1Q96FL8 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
SLC47A1Q96FL8 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC29.66■■■□□ 2.34
SLC47A1Q96FL8 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
SLC47A1Q96FL8 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC29.57■■■□□ 2.32
SLC47A1Q96FL8 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC29.54■■■□□ 2.32
SLC47A1Q96FL8 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
SLC47A1Q96FL8 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC29.44■■■□□ 2.3
SLC47A1Q96FL8 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC29.38■■■□□ 2.29
SLC47A1Q96FL8 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC29.25■■■□□ 2.27
SLC47A1Q96FL8 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
SLC47A1Q96FL8 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
SLC47A1Q96FL8 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC29.09■■■□□ 2.25
SLC47A1Q96FL8 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC28.87■■■□□ 2.21
SLC47A1Q96FL8 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC28.86■■■□□ 2.21
SLC47A1Q96FL8 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC28.79■■■□□ 2.2
SLC47A1Q96FL8 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC28.69■■■□□ 2.18
SLC47A1Q96FL8 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
SLC47A1Q96FL8 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC28.59■■■□□ 2.17
SLC47A1Q96FL8 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC28.57■■■□□ 2.16
SLC47A1Q96FL8 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC28.52■■■□□ 2.16
SLC47A1Q96FL8 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC28.42■■■□□ 2.14
SLC47A1Q96FL8 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC28.42■■■□□ 2.14
SLC47A1Q96FL8 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
SLC47A1Q96FL8 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
SLC47A1Q96FL8 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
SLC47A1Q96FL8 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
SLC47A1Q96FL8 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC28.28■■■□□ 2.12
SLC47A1Q96FL8 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
SLC47A1Q96FL8 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
SLC47A1Q96FL8 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC28.2■■■□□ 2.1
SLC47A1Q96FL8 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC28.16■■■□□ 2.1
SLC47A1Q96FL8 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC28.15■■■□□ 2.1
SLC47A1Q96FL8 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
SLC47A1Q96FL8 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
SLC47A1Q96FL8 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC28.08■■■□□ 2.09
SLC47A1Q96FL8 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC28.05■■■□□ 2.08
SLC47A1Q96FL8 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC28.04■■■□□ 2.08
SLC47A1Q96FL8 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
SLC47A1Q96FL8 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC28■■■□□ 2.07
SLC47A1Q96FL8 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC27.97■■■□□ 2.07
SLC47A1Q96FL8 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
SLC47A1Q96FL8 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
SLC47A1Q96FL8 ILK-212ENST00000532063 1617 ntTSL 2 BASIC27.89■■■□□ 2.05
SLC47A1Q96FL8 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC27.77■■■□□ 2.04
SLC47A1Q96FL8 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC27.75■■■□□ 2.03
SLC47A1Q96FL8 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC27.74■■■□□ 2.03
SLC47A1Q96FL8 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
SLC47A1Q96FL8 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC27.7■■■□□ 2.02
SLC47A1Q96FL8 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
SLC47A1Q96FL8 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
SLC47A1Q96FL8 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC27.61■■■□□ 2.01
SLC47A1Q96FL8 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
SLC47A1Q96FL8 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
SLC47A1Q96FL8 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
SLC47A1Q96FL8 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC27.52■■■□□ 2
SLC47A1Q96FL8 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC27.5■■□□□ 1.99
SLC47A1Q96FL8 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC27.49■■□□□ 1.99
SLC47A1Q96FL8 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC27.46■■□□□ 1.99
SLC47A1Q96FL8 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
SLC47A1Q96FL8 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC27.43■■□□□ 1.98
SLC47A1Q96FL8 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
SLC47A1Q96FL8 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC27.41■■□□□ 1.98
SLC47A1Q96FL8 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC27.39■■□□□ 1.98
SLC47A1Q96FL8 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC27.38■■□□□ 1.97
SLC47A1Q96FL8 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
SLC47A1Q96FL8 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC27.37■■□□□ 1.97
SLC47A1Q96FL8 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC27.37■■□□□ 1.97
SLC47A1Q96FL8 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
SLC47A1Q96FL8 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.96
SLC47A1Q96FL8 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
SLC47A1Q96FL8 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
SLC47A1Q96FL8 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC27.19■■□□□ 1.94
SLC47A1Q96FL8 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC27.15■■□□□ 1.94
SLC47A1Q96FL8 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
SLC47A1Q96FL8 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC27.14■■□□□ 1.94
SLC47A1Q96FL8 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.94
SLC47A1Q96FL8 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
SLC47A1Q96FL8 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC27.12■■□□□ 1.93
SLC47A1Q96FL8 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
SLC47A1Q96FL8 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC27.12■■□□□ 1.93
SLC47A1Q96FL8 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
SLC47A1Q96FL8 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC27.12■■□□□ 1.93
SLC47A1Q96FL8 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
SLC47A1Q96FL8 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC27.11■■□□□ 1.93
SLC47A1Q96FL8 ST7-205ENST00000393446 2114 ntTSL 5 BASIC27.11■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms