Protein–RNA interactions for Protein: P12956

XRCC6, X-ray repair cross-complementing protein 6, humanhuman

Known RBP eCLIP

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6P12956 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC7.33□□□□□ -1.242e-6■■■■■ 34.5
XRCC6P12956 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC7.21□□□□□ -1.252e-6■■■■■ 34.5
XRCC6P12956 ROR2-203ENST00000476440 316 ntTSL 56.7□□□□□ -1.342e-6■■■■■ 34.5
XRCC6P12956 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC6.03□□□□□ -1.442e-6■■■■■ 34.5
XRCC6P12956 TGFBR1-204ENST00000547314 533 ntTSL 45.18□□□□□ -1.582e-6■■■■■ 34.5
XRCC6P12956 TGFBR1-210ENST00000552573 526 ntTSL 42.51□□□□□ -2.012e-6■■■■■ 34.5
XRCC6P12956 PTK2-251ENST00000523797 405 ntTSL 324.86■■□□□ 1.579e-7■■■■■ 34.5
XRCC6P12956 PTK2-257ENST00000524357 535 ntTSL 423.16■■□□□ 1.39e-7■■■■■ 34.5
XRCC6P12956 PTK2-218ENST00000519993 4388 ntTSL 1 (best)21.19■□□□□ 0.989e-7■■■■■ 34.5
XRCC6P12956 PTK2-219ENST00000520045 602 ntTSL 420.41■□□□□ 0.869e-7■■■■■ 34.5
XRCC6P12956 PTK2-216ENST00000519881 863 ntTSL 3 BASIC20.41■□□□□ 0.869e-7■■■■■ 34.5
XRCC6P12956 PTK2-254ENST00000524040 475 ntTSL 220.23■□□□□ 0.839e-7■■■■■ 34.5
XRCC6P12956 PTK2-231ENST00000521332 630 ntTSL 420.23■□□□□ 0.839e-7■■■■■ 34.5
XRCC6P12956 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC16.48■□□□□ 0.239e-7■■■■■ 34.5
XRCC6P12956 PTK2-225ENST00000520892 571 ntTSL 4 BASIC14.6□□□□□ -0.079e-7■■■■■ 34.5
XRCC6P12956 PTK2-256ENST00000524257 430 ntTSL 411.86□□□□□ -0.519e-7■■■■■ 34.5
XRCC6P12956 PTK2-214ENST00000519635 578 ntTSL 49.69□□□□□ -0.869e-7■■■■■ 34.5
XRCC6P12956 PTK2-252ENST00000523803 750 ntTSL 39.68□□□□□ -0.869e-7■■■■■ 34.5
XRCC6P12956 PTK2-240ENST00000522684 4955 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.869e-7■■■■■ 34.5
XRCC6P12956 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.989e-7■■■■■ 34.5
XRCC6P12956 PTK2-223ENST00000520828 574 ntTSL 48.83□□□□□ -19e-7■■■■■ 34.5
XRCC6P12956 PTK2-242ENST00000523067 488 ntTSL 48.64□□□□□ -1.039e-7■■■■■ 34.5
XRCC6P12956 PTK2-205ENST00000517453 571 ntTSL 48.47□□□□□ -1.059e-7■■■■■ 34.5
XRCC6P12956 PTK2-235ENST00000521907 542 ntTSL 48.39□□□□□ -1.079e-7■■■■■ 34.5
XRCC6P12956 PTK2-234ENST00000521791 556 ntTSL 48.27□□□□□ -1.099e-7■■■■■ 34.5
XRCC6P12956 PTK2-249ENST00000523679 504 ntTSL 38.2□□□□□ -1.19e-7■■■■■ 34.5
XRCC6P12956 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC7.39□□□□□ -1.239e-7■■■■■ 34.5
XRCC6P12956 ESRRB-206ENST00000512784 1826 ntTSL 517.75■□□□□ 0.432e-7■■■■■ 34.5
XRCC6P12956 LARS-213ENST00000511505 1089 ntTSL 514.38□□□□□ -0.112e-7■■■■■ 34.5
XRCC6P12956 LARS-206ENST00000505223 582 ntTSL 312.28□□□□□ -0.442e-7■■■■■ 34.5
XRCC6P12956 LARS-202ENST00000394434 4766 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.62e-7■■■■■ 34.5
XRCC6P12956 LARS-216ENST00000618084 720 ntTSL 5 BASIC10.56□□□□□ -0.722e-7■■■■■ 34.5
XRCC6P12956 LARS-212ENST00000510191 3737 ntTSL 2 BASIC8.75□□□□□ -1.012e-7■■■■■ 34.5
XRCC6P12956 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.6□□□□□ -1.352e-7■■■■■ 34.5
XRCC6P12956 SNHG16-201ENST00000448136 3607 ntTSL 1 (best) BASIC13.04□□□□□ -0.324e-12■■■■■ 34.4
XRCC6P12956 SNHG16-208ENST00000591956 556 ntTSL 212.81□□□□□ -0.364e-12■■■■■ 34.4
XRCC6P12956 SNHG16-204ENST00000586942 568 ntTSL 4 BASIC11.52□□□□□ -0.574e-12■■■■■ 34.4
XRCC6P12956 SNHG16-207ENST00000590435 1947 ntTSL 5 BASIC10.75□□□□□ -0.694e-12■■■■■ 34.4
XRCC6P12956 SNHG16-202ENST00000493536 2424 ntTSL 1 (best)10.06□□□□□ -0.84e-12■■■■■ 34.4
XRCC6P12956 SNHG16-206ENST00000587838 884 ntTSL 35.03□□□□□ -1.64e-12■■■■■ 34.4
XRCC6P12956 TUBA1C-203ENST00000548470 1105 ntTSL 213.07□□□□□ -0.322e-6■■■■■ 34.3
XRCC6P12956 PPP4R2-203ENST00000470976 1033 ntTSL 230.3■■■□□ 2.443e-6■■■■■ 34.2
XRCC6P12956 PPP4R2-205ENST00000482242 771 ntTSL 329.64■■■□□ 2.343e-6■■■■■ 34.2
XRCC6P12956 PPP4R2-206ENST00000488810 877 ntTSL 529.53■■■□□ 2.323e-6■■■■■ 34.2
XRCC6P12956 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.173e-6■■■■■ 34.2
XRCC6P12956 PPP4R2-207ENST00000495566 559 ntTSL 3 BASIC8.93□□□□□ -0.983e-6■■■■■ 34.2
XRCC6P12956 PPP4R2-204ENST00000476505 323 ntTSL 54.4□□□□□ -1.713e-6■■■■■ 34.2
XRCC6P12956 CKB-217ENST00000557569 579 ntTSL 229■■■□□ 2.233e-6■■■■■ 34.1
XRCC6P12956 CKB-215ENST00000557287 565 ntTSL 219.77■□□□□ 0.763e-6■■■■■ 34.1
XRCC6P12956 CKB-202ENST00000553528 1170 ntTSL 219.04■□□□□ 0.643e-6■■■■■ 34.1
XRCC6P12956 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC33.45■■■□□ 2.953e-8■■■■■ 33.9
XRCC6P12956 TMEM132A-207ENST00000537065 324 ntTSL 329.5■■■□□ 2.315e-8■■■■■ 33.9
XRCC6P12956 TMEM132A-211ENST00000540276 514 ntTSL 327.86■■■□□ 2.055e-8■■■■■ 33.9
XRCC6P12956 TMEM132A-213ENST00000544065 990 ntTSL 226.31■■□□□ 1.85e-8■■■■■ 33.9
XRCC6P12956 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.615e-8■■■■■ 33.9
XRCC6P12956 FARP1-231ENST00000600648 433 ntTSL 523.92■■□□□ 1.423e-8■■■■■ 33.9
XRCC6P12956 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC22.76■■□□□ 1.235e-8■■■■■ 33.9
XRCC6P12956 AGAP1-203ENST00000402604 563 ntTSL 413.53□□□□□ -0.243e-8■■■■■ 33.9
XRCC6P12956 TMEM132A-208ENST00000537110 446 ntTSL 310.37□□□□□ -0.755e-8■■■■■ 33.9
XRCC6P12956 FARP1-202ENST00000376581 1021 ntTSL 2 BASIC9.17□□□□□ -0.943e-8■■■■■ 33.9
XRCC6P12956 RN7SKP230-201ENST00000365642 335 ntBASIC16.71■□□□□ 0.271e-6■■■■■ 33.8
XRCC6P12956 RHBG-208ENST00000620376 1984 ntTSL 225.47■■□□□ 1.671e-9■■■■■ 33.5
XRCC6P12956 RHBG-201ENST00000451864 1927 ntTSL 224.24■■□□□ 1.471e-9■■■■■ 33.5
XRCC6P12956 RHBG-205ENST00000612897 1862 ntTSL 1 (best)21.01■□□□□ 0.951e-9■■■■■ 33.5
XRCC6P12956 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.871e-9■■■■■ 33.5
XRCC6P12956 RHBG-207ENST00000618120 2424 ntTSL 216.56■□□□□ 0.241e-9■■■■■ 33.5
XRCC6P12956 RHBG-206ENST00000613460 1912 ntTSL 1 (best)16.29■□□□□ 0.21e-9■■■■■ 33.5
XRCC6P12956 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.96■■□□□ 1.114e-6■■■■■ 33.5
XRCC6P12956 PPM1D-202ENST00000392995 2996 ntTSL 219.05■□□□□ 0.644e-6■■■■■ 33.5
XRCC6P12956 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.614e-6■■■■■ 33.5
XRCC6P12956 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.332e-13■■■■■ 33.3
XRCC6P12956 FBXO42-204ENST00000478089 2920 ntTSL 1 (best)8.9□□□□□ -0.992e-13■■■■■ 33.3
XRCC6P12956 NCAM2-202ENST00000400546 8135 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.841e-11■■■■■ 33.2
XRCC6P12956 RNA5SP389-201ENST00000362610 115 ntBASIC8.7□□□□□ -1.024e-10■■■■■ 32.8
XRCC6P12956 SETD5-209ENST00000431285 1824 ntTSL 526.89■■□□□ 1.98e-8■■■■■ 32.2
XRCC6P12956 SETD5-214ENST00000463180 685 ntTSL 221.94■■□□□ 1.18e-8■■■■■ 32.2
XRCC6P12956 WDR27-210ENST00000496752 1562 ntTSL 520.83■□□□□ 0.928e-8■■■■■ 32.2
XRCC6P12956 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.568e-8■■■■■ 32.2
XRCC6P12956 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.48e-8■■■■■ 32.2
XRCC6P12956 SETD5-212ENST00000450326 921 ntTSL 317.37■□□□□ 0.378e-8■■■■■ 32.2
XRCC6P12956 F2-205ENST00000530231 1849 ntTSL 5 BASIC16.91■□□□□ 0.38e-8■■■■■ 32.2
XRCC6P12956 WDR27-203ENST00000448612 3178 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.188e-8■■■■■ 32.2
XRCC6P12956 SETD5-207ENST00000415650 579 ntTSL 415.45■□□□□ 0.068e-8■■■■■ 32.2
XRCC6P12956 FANCA-202ENST00000389301 5451 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.078e-8■■■■■ 32.2
XRCC6P12956 SETD5-211ENST00000443339 3478 ntTSL 213.08□□□□□ -0.318e-8■■■■■ 32.2
XRCC6P12956 FANCA-230ENST00000568369 4601 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.428e-8■■■■■ 32.2
XRCC6P12956 SETD5-203ENST00000402198 6827 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.545e-12■■■■■ 32.2
XRCC6P12956 SETD5-204ENST00000406341 6582 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.975e-12■■■■■ 32.2
XRCC6P12956 SETD5-221ENST00000478475 477 ntTSL 48.42□□□□□ -1.068e-8■■■■■ 32.2
XRCC6P12956 PUM2-209ENST00000440577 4352 ntTSL 1 (best)6.6□□□□□ -1.358e-8■■■■■ 32.2
XRCC6P12956 DEK-207ENST00000515742 661 ntTSL 225.91■■□□□ 1.742e-6■■■■■ 32.2
XRCC6P12956 CALM2-207ENST00000484408 682 ntTSL 523.16■■□□□ 1.32e-6■■■■■ 32.2
XRCC6P12956 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.992e-6■■■■■ 32.2
XRCC6P12956 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC20.27■□□□□ 0.842e-6■■■■■ 32.2
XRCC6P12956 CALM2-208ENST00000489742 522 ntTSL 317.88■□□□□ 0.452e-6■■■■■ 32.2
XRCC6P12956 DEK-201ENST00000244776 1441 ntTSL 2 BASIC17.59■□□□□ 0.412e-6■■■■■ 32.2
XRCC6P12956 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.372e-6■■■■■ 32.2
XRCC6P12956 DEK-204ENST00000505224 1372 ntTSL 215.87■□□□□ 0.132e-6■■■■■ 32.2
XRCC6P12956 CALM2-203ENST00000432899 1004 ntTSL 514.91□□□□□ -0.022e-6■■■■■ 32.2
XRCC6P12956 DEK-203ENST00000503715 580 ntTSL 514.6□□□□□ -0.072e-6■■■■■ 32.2
Retrieved 100 of 6,788 protein–RNA pairs in 164.9 ms