RNA–Protein interactions for RNA: ENST00000524257.5

PTK2-256, Transcript of protein tyrosine kinase 2, humanhuman

TSL 4

Gene PTK2, Length 430 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2-256ENST00000524257 NISCHQ9Y2I1 1504 aa26.13■■□□□ 1.77
PTK2-256ENST00000524257 CCDC180Q9P1Z9 1646 aa23.31■■□□□ 1.32
PTK2-256ENST00000524257 ABCC9O60706 1549 aa22.95■■□□□ 1.26
PTK2-256ENST00000524257 RB1CC1Q8TDY2 1594 aa22.01■■□□□ 1.11
PTK2-256ENST00000524257 NACADO15069 1562 aa21.94■■□□□ 1.1
PTK2-256ENST00000524257 DCAF8L2P0C7V8 631 aa21.9■■□□□ 1.1
PTK2-256ENST00000524257 MYO15BQ96JP2 1530 aa21.74■■□□□ 1.07
PTK2-256ENST00000524257 ZCCHC6Q5VYS8 1495 aaKnown RBP21.73■■□□□ 1.07
PTK2-256ENST00000524257 DCAF1Q9Y4B6 1507 aa21.6■■□□□ 1.05
PTK2-256ENST00000524257 UNC13AQ9UPW8 1703 aa21.54■■□□□ 1.04
PTK2-256ENST00000524257 PABPN1Q86U42 306 aaKnown RBP eCLIP21.41■■□□□ 1.02
PTK2-256ENST00000524257 BICRAQ9NZM4 1560 aa21.35■■□□□ 1.01
PTK2-256ENST00000524257 SCRIBQ14160 1630 aa21.27■■□□□ 1
PTK2-256ENST00000524257 DNAJC5BQ9UF47 199 aa21.18■□□□□ 0.98
PTK2-256ENST00000524257 SHROOM4Q9ULL8 1493 aa21.08■□□□□ 0.97
PTK2-256ENST00000524257 EIF4G1Q04637 1599 aaKnown RBP20.8■□□□□ 0.92
PTK2-256ENST00000524257 CC2D2AQ9P2K1 1620 aa20.75■□□□□ 0.91
PTK2-256ENST00000524257 CECR2Q9BXF3 1484 aa20.63■□□□□ 0.89
PTK2-256ENST00000524257 SMARCA4P51532 1647 aa20.32■□□□□ 0.84
PTK2-256ENST00000524257 BAZ1AQ9NRL2 1556 aaPredicted RBP20.26■□□□□ 0.83
PTK2-256ENST00000524257 NCAPD3P42695 1498 aa20.23■□□□□ 0.83
PTK2-256ENST00000524257 ATAD2BQ9ULI0 1458 aa20.23■□□□□ 0.83
PTK2-256ENST00000524257 SMARCA2P51531 1590 aa20.21■□□□□ 0.83
PTK2-256ENST00000524257 MROH2BQ7Z745 1585 aa20.14■□□□□ 0.81
PTK2-256ENST00000524257 HMGXB3Q12766 1538 aa20.13■□□□□ 0.81
PTK2-256ENST00000524257 PEG3Q9GZU2 1588 aa20.1■□□□□ 0.81
PTK2-256ENST00000524257 BAZ1BQ9UIG0 1483 aaKnown RBP20.06■□□□□ 0.8
PTK2-256ENST00000524257 WIZO95785 1651 aa19.94■□□□□ 0.78
PTK2-256ENST00000524257 RSF1Q96T23 1441 aaPredicted RBP19.85■□□□□ 0.77
PTK2-256ENST00000524257 NESP48681 1621 aa19.82■□□□□ 0.76
PTK2-256ENST00000524257 ERCC6Q03468 1493 aa19.79■□□□□ 0.76
PTK2-256ENST00000524257 LAMC3Q9Y6N6 1575 aa19.74■□□□□ 0.75
PTK2-256ENST00000524257 TOP2AP11388 1531 aaKnown RBP19.7■□□□□ 0.74
PTK2-256ENST00000524257 CADPSQ9ULU8 1353 aa19.64■□□□□ 0.73
PTK2-256ENST00000524257 CUX2O14529 1486 aa19.62■□□□□ 0.73
PTK2-256ENST00000524257 KIF21AQ7Z4S6 1674 aa19.61■□□□□ 0.73
PTK2-256ENST00000524257 PDS5BQ9NTI5 1447 aa19.6■□□□□ 0.73
PTK2-256ENST00000524257 THOC2Q8NI27 1593 aaKnown RBP19.56■□□□□ 0.72
PTK2-256ENST00000524257 CFTRP13569 1480 aa19.49■□□□□ 0.71
PTK2-256ENST00000524257 CCDC88BA6NC98 1476 aa19.46■□□□□ 0.71
PTK2-256ENST00000524257 FANCD2Q9BXW9 1451 aa19.42■□□□□ 0.7
PTK2-256ENST00000524257 MRC2Q9UBG0 1479 aa19.42■□□□□ 0.7
PTK2-256ENST00000524257 CEP164Q9UPV0 1460 aa19.41■□□□□ 0.7
PTK2-256ENST00000524257 PRDM2Q13029 1718 aa19.39■□□□□ 0.69
PTK2-256ENST00000524257 WDR62O43379 1518 aa19.35■□□□□ 0.69
PTK2-256ENST00000524257 SUPT5HO00267 1087 aaKnown RBP19.25■□□□□ 0.67
PTK2-256ENST00000524257 URB2Q14146 1524 aaKnown RBP19.25■□□□□ 0.67
PTK2-256ENST00000524257 DNAJC5Q9H3Z4 198 aa19.18■□□□□ 0.66
PTK2-256ENST00000524257 TOPBP1Q92547 1522 aa19.1■□□□□ 0.65
PTK2-256ENST00000524257 ABCC8Q09428 1581 aa19.07■□□□□ 0.64
PTK2-256ENST00000524257 DNMBPQ6XZF7 1577 aa19.07■□□□□ 0.64
PTK2-256ENST00000524257 IFT140Q96RY7 1462 aa19.01■□□□□ 0.63
PTK2-256ENST00000524257 ZNF608Q9ULD9 1512 aaPredicted RBP18.95■□□□□ 0.62
PTK2-256ENST00000524257 POLA1P09884 1462 aaPredicted RBP18.93■□□□□ 0.62
PTK2-256ENST00000524257 CUX1P39880 1505 aa18.91■□□□□ 0.62
PTK2-256ENST00000524257 TARBP1Q13395 1621 aaKnown RBP18.91■□□□□ 0.62
PTK2-256ENST00000524257 EIF4G3O43432 1585 aaKnown RBP18.88■□□□□ 0.61
PTK2-256ENST00000524257 FGD5Q6ZNL6 1462 aa18.86■□□□□ 0.61
PTK2-256ENST00000524257 RAD54L2Q9Y4B4 1467 aa18.85■□□□□ 0.61
PTK2-256ENST00000524257 SOGA1O94964 1423 aa18.84■□□□□ 0.61
PTK2-256ENST00000524257 AQRO60306 1485 aaKnown RBP eCLIP18.82■□□□□ 0.63e-6■■■■□ 24.7
PTK2-256ENST00000524257 OSCARQ8IYS5 282 aa18.77■□□□□ 0.6
PTK2-256ENST00000524257 TDRD9Q8NDG6 1382 aaKnown RBP18.76■□□□□ 0.59
PTK2-256ENST00000524257 WDR97A6NE52 1622 aa18.74■□□□□ 0.59
PTK2-256ENST00000524257 WRNQ14191 1432 aaPredicted RBP eCLIP18.72■□□□□ 0.59
PTK2-256ENST00000524257 BIVM-ERCC5R4GMW8 1640 aa18.71■□□□□ 0.59
PTK2-256ENST00000524257 TOP2BQ02880 1626 aa18.71■□□□□ 0.58
PTK2-256ENST00000524257 SYNJ1O43426 1573 aa18.7■□□□□ 0.58
PTK2-256ENST00000524257 CHD1O14646 1710 aa18.69■□□□□ 0.58
PTK2-256ENST00000524257 ABCA10Q8WWZ4 1543 aa18.67■□□□□ 0.58
PTK2-256ENST00000524257 GRIN2BQ13224 1484 aa18.65■□□□□ 0.58
PTK2-256ENST00000524257 SNAPC4Q5SXM2 1469 aa18.65■□□□□ 0.58
PTK2-256ENST00000524257 PBRM1Q86U86 1689 aa18.63■□□□□ 0.57
PTK2-256ENST00000524257 FBLN2P98095 1184 aa18.63■□□□□ 0.57
PTK2-256ENST00000524257 GAPVD1Q14C86 1478 aa18.63■□□□□ 0.57
PTK2-256ENST00000524257 ABCA5Q8WWZ7 1642 aa18.62■□□□□ 0.57
PTK2-256ENST00000524257 MAGI1Q96QZ7 1491 aaPredicted RBP18.61■□□□□ 0.57
PTK2-256ENST00000524257 SYNJ2O15056 1496 aa18.54■□□□□ 0.56
PTK2-256ENST00000524257 CHMP7Q8WUX9 453 aaPredicted RBP18.54■□□□□ 0.56
PTK2-256ENST00000524257 RIMBP3CA6NJZ7 1639 aa18.52■□□□□ 0.56
PTK2-256ENST00000524257 RIMBP3BA6NNM3 1639 aa18.52■□□□□ 0.56
PTK2-256ENST00000524257 RIMBP3Q9UFD9 1639 aa18.52■□□□□ 0.56
PTK2-256ENST00000524257 TRIM41Q8WV44 630 aa18.52■□□□□ 0.56
PTK2-256ENST00000524257 ARHGEF11O15085 1522 aa18.49■□□□□ 0.55
PTK2-256ENST00000524257 ADAMTS12P58397 1594 aa18.46■□□□□ 0.55
PTK2-256ENST00000524257 CLASP1Q7Z460 1538 aa18.45■□□□□ 0.54
PTK2-256ENST00000524257 ERICH3Q5RHP9 1530 aa18.44■□□□□ 0.54
PTK2-256ENST00000524257 GRIN2AQ12879 1464 aa18.4■□□□□ 0.54
PTK2-256ENST00000524257 FHAD1B1AJZ9 1412 aa18.4■□□□□ 0.54
PTK2-256ENST00000524257 ARAP1Q96P48 1450 aa18.34■□□□□ 0.53
PTK2-256ENST00000524257 KIF27Q86VH2 1401 aa18.33■□□□□ 0.53
PTK2-256ENST00000524257 CEP170Q5SW79 1584 aa18.33■□□□□ 0.52
PTK2-256ENST00000524257 CYB5RLQ6IPT4 315 aa18.32■□□□□ 0.52
PTK2-256ENST00000524257 NUP160Q12769 1436 aa18.32■□□□□ 0.52
PTK2-256ENST00000524257 IGF1RP08069 1367 aa18.28■□□□□ 0.52
PTK2-256ENST00000524257 CUL7Q14999 1698 aa18.26■□□□□ 0.51
PTK2-256ENST00000524257 SHROOM2Q13796 1616 aa18.22■□□□□ 0.51
PTK2-256ENST00000524257 ERCC6L2Q5T890 1561 aa18.2■□□□□ 0.5
PTK2-256ENST00000524257 RUSC2Q8N2Y8 1516 aa18.18■□□□□ 0.5
PTK2-256ENST00000524257 CARMIL1Q5VZK9 1371 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms