RNA–Protein interactions for RNA: ENST00000524357.5

PTK2-257, Transcript of protein tyrosine kinase 2, humanhuman

TSL 4

Gene PTK2, Length 535 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2-257ENST00000524357 NISCHQ9Y2I1 1504 aa50.94■■■■■ 5.75
PTK2-257ENST00000524357 CCDC180Q9P1Z9 1646 aa45.36■■■■■ 4.85
PTK2-257ENST00000524357 ABCC9O60706 1549 aa44.84■■■■■ 4.77
PTK2-257ENST00000524357 RB1CC1Q8TDY2 1594 aa42.9■■■■■ 4.46
PTK2-257ENST00000524357 DCAF8L2P0C7V8 631 aa42.87■■■■■ 4.45
PTK2-257ENST00000524357 NACADO15069 1562 aa42.75■■■■■ 4.43
PTK2-257ENST00000524357 ZCCHC6Q5VYS8 1495 aaKnown RBP42.35■■■■■ 4.37
PTK2-257ENST00000524357 MYO15BQ96JP2 1530 aa42.34■■■■■ 4.37
PTK2-257ENST00000524357 DCAF1Q9Y4B6 1507 aa42.06■■■■■ 4.32
PTK2-257ENST00000524357 UNC13AQ9UPW8 1703 aa41.91■■■■■ 4.3
PTK2-257ENST00000524357 PABPN1Q86U42 306 aaKnown RBP eCLIP41.9■■■■■ 4.3
PTK2-257ENST00000524357 BICRAQ9NZM4 1560 aa41.62■■■■■ 4.25
PTK2-257ENST00000524357 SCRIBQ14160 1630 aa41.48■■■■■ 4.23
PTK2-257ENST00000524357 DNAJC5BQ9UF47 199 aa41.46■■■■■ 4.23
PTK2-257ENST00000524357 SHROOM4Q9ULL8 1493 aa41.07■■■■■ 4.16
PTK2-257ENST00000524357 EIF4G1Q04637 1599 aaKnown RBP40.56■■■■■ 4.08
PTK2-257ENST00000524357 CC2D2AQ9P2K1 1620 aa40.49■■■■■ 4.07
PTK2-257ENST00000524357 CECR2Q9BXF3 1484 aa40.29■■■■■ 4.04
PTK2-257ENST00000524357 SMARCA4P51532 1647 aa39.59■■■■□ 3.93
PTK2-257ENST00000524357 BAZ1AQ9NRL2 1556 aaPredicted RBP39.49■■■■□ 3.91
PTK2-257ENST00000524357 NCAPD3P42695 1498 aa39.47■■■■□ 3.91
PTK2-257ENST00000524357 ATAD2BQ9ULI0 1458 aa39.47■■■■□ 3.91
PTK2-257ENST00000524357 SMARCA2P51531 1590 aa39.38■■■■□ 3.89
PTK2-257ENST00000524357 MROH2BQ7Z745 1585 aa39.28■■■■□ 3.88
PTK2-257ENST00000524357 HMGXB3Q12766 1538 aa39.22■■■■□ 3.87
PTK2-257ENST00000524357 PEG3Q9GZU2 1588 aa39.15■■■■□ 3.86
PTK2-257ENST00000524357 BAZ1BQ9UIG0 1483 aaKnown RBP39.14■■■■□ 3.86
PTK2-257ENST00000524357 WIZO95785 1651 aa38.84■■■■□ 3.81
PTK2-257ENST00000524357 RSF1Q96T23 1441 aaPredicted RBP38.72■■■■□ 3.79
PTK2-257ENST00000524357 NESP48681 1621 aa38.69■■■■□ 3.78
PTK2-257ENST00000524357 ERCC6Q03468 1493 aa38.66■■■■□ 3.78
PTK2-257ENST00000524357 LAMC3Q9Y6N6 1575 aa38.47■■■■□ 3.75
PTK2-257ENST00000524357 TOP2AP11388 1531 aaKnown RBP38.38■■■■□ 3.73
PTK2-257ENST00000524357 CADPSQ9ULU8 1353 aa38.33■■■■□ 3.73
PTK2-257ENST00000524357 CUX2O14529 1486 aa38.28■■■■□ 3.72
PTK2-257ENST00000524357 PDS5BQ9NTI5 1447 aa38.27■■■■□ 3.72
PTK2-257ENST00000524357 KIF21AQ7Z4S6 1674 aa38.18■■■■□ 3.7
PTK2-257ENST00000524357 THOC2Q8NI27 1593 aaKnown RBP38.1■■■■□ 3.69
PTK2-257ENST00000524357 CFTRP13569 1480 aa38.02■■■■□ 3.68
PTK2-257ENST00000524357 CCDC88BA6NC98 1476 aa37.97■■■■□ 3.67
PTK2-257ENST00000524357 FANCD2Q9BXW9 1451 aa37.9■■■■□ 3.66
PTK2-257ENST00000524357 MRC2Q9UBG0 1479 aa37.89■■■■□ 3.66
PTK2-257ENST00000524357 CEP164Q9UPV0 1460 aa37.88■■■■□ 3.65
PTK2-257ENST00000524357 WDR62O43379 1518 aa37.75■■■■□ 3.63
PTK2-257ENST00000524357 PRDM2Q13029 1718 aa37.64■■■■□ 3.62
PTK2-257ENST00000524357 SUPT5HO00267 1087 aaKnown RBP37.62■■■■□ 3.61
PTK2-257ENST00000524357 DNAJC5Q9H3Z4 198 aa37.56■■■■□ 3.6
PTK2-257ENST00000524357 URB2Q14146 1524 aaKnown RBP37.55■■■■□ 3.6
PTK2-257ENST00000524357 TOPBP1Q92547 1522 aa37.26■■■■□ 3.55
PTK2-257ENST00000524357 ABCC8Q09428 1581 aa37.2■■■■□ 3.55
PTK2-257ENST00000524357 DNMBPQ6XZF7 1577 aa37.17■■■■□ 3.54
PTK2-257ENST00000524357 IFT140Q96RY7 1462 aa37.1■■■■□ 3.53
PTK2-257ENST00000524357 ZNF608Q9ULD9 1512 aaPredicted RBP37■■■■□ 3.51
PTK2-257ENST00000524357 POLA1P09884 1462 aaPredicted RBP36.92■■■■□ 3.5
PTK2-257ENST00000524357 CUX1P39880 1505 aa36.86■■■■□ 3.49
PTK2-257ENST00000524357 TARBP1Q13395 1621 aaKnown RBP36.85■■■■□ 3.49
PTK2-257ENST00000524357 RAD54L2Q9Y4B4 1467 aa36.82■■■■□ 3.48
PTK2-257ENST00000524357 FGD5Q6ZNL6 1462 aa36.8■■■■□ 3.48
PTK2-257ENST00000524357 EIF4G3O43432 1585 aaKnown RBP36.79■■■■□ 3.48
PTK2-257ENST00000524357 SOGA1O94964 1423 aa36.79■■■■□ 3.48
PTK2-257ENST00000524357 AQRO60306 1485 aaKnown RBP eCLIP36.75■■■■□ 3.473e-6■■■■□ 24.7
PTK2-257ENST00000524357 OSCARQ8IYS5 282 aa36.73■■■■□ 3.47
PTK2-257ENST00000524357 TDRD9Q8NDG6 1382 aaKnown RBP36.66■■■■□ 3.46
PTK2-257ENST00000524357 WRNQ14191 1432 aaPredicted RBP eCLIP36.52■■■■□ 3.44
PTK2-257ENST00000524357 WDR97A6NE52 1622 aa36.48■■■■□ 3.43
PTK2-257ENST00000524357 FBLN2P98095 1184 aa36.45■■■■□ 3.43
PTK2-257ENST00000524357 SYNJ1O43426 1573 aa36.44■■■■□ 3.42
PTK2-257ENST00000524357 TOP2BQ02880 1626 aa36.43■■■■□ 3.42
PTK2-257ENST00000524357 BIVM-ERCC5R4GMW8 1640 aa36.41■■■■□ 3.42
PTK2-257ENST00000524357 CHD1O14646 1710 aa36.39■■■■□ 3.42
PTK2-257ENST00000524357 SNAPC4Q5SXM2 1469 aa36.39■■■■□ 3.42
PTK2-257ENST00000524357 ABCA10Q8WWZ4 1543 aa36.39■■■■□ 3.42
PTK2-257ENST00000524357 GRIN2BQ13224 1484 aa36.37■■■■□ 3.41
PTK2-257ENST00000524357 GAPVD1Q14C86 1478 aa36.34■■■■□ 3.41
PTK2-257ENST00000524357 TRIM41Q8WV44 630 aa36.29■■■■□ 3.4
PTK2-257ENST00000524357 MAGI1Q96QZ7 1491 aaPredicted RBP36.28■■■■□ 3.4
PTK2-257ENST00000524357 CHMP7Q8WUX9 453 aaPredicted RBP36.26■■■■□ 3.4
PTK2-257ENST00000524357 ABCA5Q8WWZ7 1642 aa36.26■■■■□ 3.39
PTK2-257ENST00000524357 PBRM1Q86U86 1689 aa36.26■■■■□ 3.39
PTK2-257ENST00000524357 SYNJ2O15056 1496 aa36.17■■■■□ 3.38
PTK2-257ENST00000524357 RIMBP3CA6NJZ7 1639 aa36.14■■■■□ 3.38
PTK2-257ENST00000524357 RIMBP3BA6NNM3 1639 aa36.14■■■■□ 3.38
PTK2-257ENST00000524357 RIMBP3Q9UFD9 1639 aa36.14■■■■□ 3.38
PTK2-257ENST00000524357 ARHGEF11O15085 1522 aa36.09■■■■□ 3.37
PTK2-257ENST00000524357 CLASP1Q7Z460 1538 aa35.98■■■■□ 3.35
PTK2-257ENST00000524357 ADAMTS12P58397 1594 aa35.95■■■■□ 3.35
PTK2-257ENST00000524357 ERICH3Q5RHP9 1530 aa35.94■■■■□ 3.34
PTK2-257ENST00000524357 FHAD1B1AJZ9 1412 aa35.91■■■■□ 3.34
PTK2-257ENST00000524357 GRIN2AQ12879 1464 aa35.9■■■■□ 3.34
PTK2-257ENST00000524357 CYB5RLQ6IPT4 315 aa35.87■■■■□ 3.33
PTK2-257ENST00000524357 ARAP1Q96P48 1450 aa35.79■■■■□ 3.32
PTK2-257ENST00000524357 KIF27Q86VH2 1401 aa35.78■■■■□ 3.32
PTK2-257ENST00000524357 CEP170Q5SW79 1584 aa35.74■■■■□ 3.31
PTK2-257ENST00000524357 NUP160Q12769 1436 aa35.74■■■■□ 3.31
PTK2-257ENST00000524357 IGF1RP08069 1367 aa35.68■■■■□ 3.3
PTK2-257ENST00000524357 CUL7Q14999 1698 aa35.55■■■■□ 3.28
PTK2-257ENST00000524357 ERCC6L2Q5T890 1561 aa35.51■■■■□ 3.28
PTK2-257ENST00000524357 CARMIL1Q5VZK9 1371 aa35.48■■■■□ 3.27
PTK2-257ENST00000524357 SHROOM2Q13796 1616 aa35.47■■■■□ 3.27
PTK2-257ENST00000524357 JPH4Q96JJ6 628 aa35.44■■■■□ 3.26
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms