RNA–Protein interactions for RNA: ENST00000400546.5

NCAM2-202, Transcript of neural cell adhesion molecule 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NCAM2, Length 8,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAM2-202ENST00000400546 DCAF8L2P0C7V8 631 aa15.6■□□□□ 0.09
NCAM2-202ENST00000400546 SUPT5HO00267 1087 aaKnown RBP14.59□□□□□ -0.07
NCAM2-202ENST00000400546 EHMT2Q96KQ7 1210 aa14.46□□□□□ -0.09
NCAM2-202ENST00000400546 SHROOM4Q9ULL8 1493 aa14.31□□□□□ -0.12
NCAM2-202ENST00000400546 NISCHQ9Y2I1 1504 aa13.94□□□□□ -0.18
NCAM2-202ENST00000400546 TTBK1Q5TCY1 1321 aaPredicted RBP13.9□□□□□ -0.18
NCAM2-202ENST00000400546 FAM9AQ8IZU1 332 aaPredicted RBP13.87□□□□□ -0.19
NCAM2-202ENST00000400546 APLP2Q06481 763 aa13.78□□□□□ -0.2
NCAM2-202ENST00000400546 RANGAP1P46060 587 aaPredicted RBP13.76□□□□□ -0.21
NCAM2-202ENST00000400546 ATP1B4Q9UN42 357 aaPredicted RBP13.59□□□□□ -0.23
NCAM2-202ENST00000400546 PCGF6Q9BYE7 350 aa13.59□□□□□ -0.23
NCAM2-202ENST00000400546 PELP1Q8IZL8 1130 aaKnown RBP13.51□□□□□ -0.25
NCAM2-202ENST00000400546 TRIM41Q8WV44 630 aa13.35□□□□□ -0.27
NCAM2-202ENST00000400546 UBTFP17480 764 aaKnown RBP13.34□□□□□ -0.27
NCAM2-202ENST00000400546 CCER1Q8TC90 406 aaPredicted RBP13.31□□□□□ -0.28
NCAM2-202ENST00000400546 PPARGC1BQ86YN6 1023 aaKnown RBP13.31□□□□□ -0.28
NCAM2-202ENST00000400546 YTHDC1Q96MU7 727 aaKnown RBP13.13□□□□□ -0.31
NCAM2-202ENST00000400546 ERICH6Q7L0X2 663 aa13.11□□□□□ -0.31
NCAM2-202ENST00000400546 MYT1LQ9UL68 1186 aa13.09□□□□□ -0.31
NCAM2-202ENST00000400546 CENPBP07199 599 aaPredicted RBP13.07□□□□□ -0.32
NCAM2-202ENST00000400546 ITGAEP38570 1179 aa13.07□□□□□ -0.32
NCAM2-202ENST00000400546 CNGB1Q14028 1251 aaPredicted RBP13.05□□□□□ -0.32
NCAM2-202ENST00000400546 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.05□□□□□ -0.32
NCAM2-202ENST00000400546 HNRNPUL2Q1KMD3 747 aaKnown RBP13.05□□□□□ -0.32
NCAM2-202ENST00000400546 CHIC1Q5VXU3 224 aa13.04□□□□□ -0.32
NCAM2-202ENST00000400546 POLR3GLQ9BT43 218 aa13.02□□□□□ -0.33
NCAM2-202ENST00000400546 NEFLP07196 543 aa12.94□□□□□ -0.34
NCAM2-202ENST00000400546 ZEB1P37275 1124 aaPredicted RBP12.94□□□□□ -0.34
NCAM2-202ENST00000400546 LOC105371045A0A1W2PR82 267 aa12.88□□□□□ -0.35
NCAM2-202ENST00000400546 SLC4A1APQ9BWU0 796 aaKnown RBP12.81□□□□□ -0.36
NCAM2-202ENST00000400546 TRIM26Q12899 539 aaPredicted RBP12.71□□□□□ -0.37
NCAM2-202ENST00000400546 MYT1Q01538 1121 aa12.66□□□□□ -0.38
NCAM2-202ENST00000400546 PABPN1Q86U42 306 aaKnown RBP eCLIP12.64□□□□□ -0.39
NCAM2-202ENST00000400546 DAXXQ9UER7 740 aaPredicted RBP12.64□□□□□ -0.39
NCAM2-202ENST00000400546 HRCP23327 699 aa12.63□□□□□ -0.39
NCAM2-202ENST00000400546 FAM50AQ14320 339 aaKnown RBP12.58□□□□□ -0.4
NCAM2-202ENST00000400546 FBLN2P98095 1184 aa12.56□□□□□ -0.4
NCAM2-202ENST00000400546 NEUROD1Q13562 356 aa12.51□□□□□ -0.41
NCAM2-202ENST00000400546 CLSPNQ9HAW4 1339 aa12.51□□□□□ -0.41
NCAM2-202ENST00000400546 TRIM52Q96A61 297 aa12.51□□□□□ -0.41
NCAM2-202ENST00000400546 BCL11AQ9H165 835 aa12.5□□□□□ -0.41
NCAM2-202ENST00000400546 ZNF326Q5BKZ1 582 aaKnown RBP12.48□□□□□ -0.41
NCAM2-202ENST00000400546 ABCC9O60706 1549 aa12.48□□□□□ -0.41
NCAM2-202ENST00000400546 ARID3CA6NKF2 412 aa12.46□□□□□ -0.41
NCAM2-202ENST00000400546 SLC24A1O60721 1099 aa12.44□□□□□ -0.42
NCAM2-202ENST00000400546 DIEXFQ68CQ4 756 aaKnown RBP12.4□□□□□ -0.42
NCAM2-202ENST00000400546 P3H3Q8IVL6 736 aa12.38□□□□□ -0.43
NCAM2-202ENST00000400546 BCANQ96GW7 911 aa12.37□□□□□ -0.43
NCAM2-202ENST00000400546 PLPPR3Q6T4P5 718 aa12.34□□□□□ -0.43
NCAM2-202ENST00000400546 ZNF316A6NFI3 1004 aaPredicted RBP12.32□□□□□ -0.44
NCAM2-202ENST00000400546 ZNF777Q9ULD5 760 aaPredicted RBP12.24□□□□□ -0.45
NCAM2-202ENST00000400546 RTL5Q5HYW3 569 aaPredicted RBP12.22□□□□□ -0.45
NCAM2-202ENST00000400546 ZBTB47Q9UFB7 747 aaPredicted RBP12.19□□□□□ -0.46
NCAM2-202ENST00000400546 ANP32CO43423 234 aa12.19□□□□□ -0.46
NCAM2-202ENST00000400546 CHGAP10645 457 aaKnown RBP12.14□□□□□ -0.47
NCAM2-202ENST00000400546 CANXP27824 592 aaKnown RBP12.14□□□□□ -0.47
NCAM2-202ENST00000400546 GTF3C3Q9Y5Q9 886 aa12.12□□□□□ -0.47
NCAM2-202ENST00000400546 SENP3Q9H4L4 574 aaPredicted RBP12.1□□□□□ -0.47
NCAM2-202ENST00000400546 ESF1Q9H501 851 aaKnown RBP12.1□□□□□ -0.47
NCAM2-202ENST00000400546 NEFMP07197 916 aa12.1□□□□□ -0.47
NCAM2-202ENST00000400546 SALL2Q9Y467 1007 aaPredicted RBP12.09□□□□□ -0.47
NCAM2-202ENST00000400546 STAG3Q9UJ98 1225 aa12.07□□□□□ -0.48
NCAM2-202ENST00000400546 PLEKHG5O94827 1062 aa12.05□□□□□ -0.48
NCAM2-202ENST00000400546 CDK11AQ9UQ88 783 aaPredicted RBP12.03□□□□□ -0.48
NCAM2-202ENST00000400546 CSRNP3Q8WYN3 585 aa12.02□□□□□ -0.48
NCAM2-202ENST00000400546 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.02□□□□□ -0.49
NCAM2-202ENST00000400546 NPM2Q86SE8 214 aaKnown RBP11.99□□□□□ -0.49
NCAM2-202ENST00000400546 CHIC2Q9UKJ5 165 aa11.99□□□□□ -0.49
NCAM2-202ENST00000400546 A0A0G2JS52 829 aa11.97□□□□□ -0.49
NCAM2-202ENST00000400546 SCAF1Q9H7N4 1312 aaKnown RBP11.96□□□□□ -0.49
NCAM2-202ENST00000400546 NPM1P06748 294 aaKnown RBP eCLIP11.96□□□□□ -0.49
NCAM2-202ENST00000400546 FAM9BQ8IZU0 186 aa11.94□□□□□ -0.5
NCAM2-202ENST00000400546 KDM2AQ9Y2K7 1162 aa11.93□□□□□ -0.5
NCAM2-202ENST00000400546 DDX10Q13206 875 aaKnown RBP11.93□□□□□ -0.5
NCAM2-202ENST00000400546 HIRIP3Q9BW71 556 aaPredicted RBP11.91□□□□□ -0.5
NCAM2-202ENST00000400546 HNRNPUQ00839 825 aaKnown RBP eCLIP11.89□□□□□ -0.51
NCAM2-202ENST00000400546 HSP90AA1P07900 732 aaKnown RBP11.88□□□□□ -0.51
NCAM2-202ENST00000400546 TONSLQ96HA7 1378 aa11.87□□□□□ -0.51
NCAM2-202ENST00000400546 SENP3-EIF4A1A0A087X0R7 540 aa11.86□□□□□ -0.51
NCAM2-202ENST00000400546 SCRIBQ14160 1630 aa11.86□□□□□ -0.51
NCAM2-202ENST00000400546 FKBP8Q14318 412 aa11.85□□□□□ -0.51
NCAM2-202ENST00000400546 ANP32AP39687 249 aaKnown RBP11.84□□□□□ -0.51
NCAM2-202ENST00000400546 TMC1Q8TDI8 760 aa11.84□□□□□ -0.51
NCAM2-202ENST00000400546 KCNH8Q96L42 1107 aa11.83□□□□□ -0.52
NCAM2-202ENST00000400546 ZBTB7CA1YPR0 619 aa11.82□□□□□ -0.52
NCAM2-202ENST00000400546 ARXQ96QS3 562 aa11.81□□□□□ -0.52
NCAM2-202ENST00000400546 C14orf37Q86TY3 774 aa11.81□□□□□ -0.52
NCAM2-202ENST00000400546 CHMP7Q8WUX9 453 aaPredicted RBP11.8□□□□□ -0.52
NCAM2-202ENST00000400546 TSPY4P0CV99 314 aa11.8□□□□□ -0.52
NCAM2-202ENST00000400546 TSPY10P0CW01 314 aa11.8□□□□□ -0.52
NCAM2-202ENST00000400546 IRX6P78412 446 aaPredicted RBP11.76□□□□□ -0.53
NCAM2-202ENST00000400546 RGL3Q3MIN7 710 aa11.76□□□□□ -0.53
NCAM2-202ENST00000400546 ACIN1Q9UKV3 1341 aaKnown RBP11.76□□□□□ -0.53
NCAM2-202ENST00000400546 RRP7BPQ9NSQ0 103 aa11.75□□□□□ -0.53
NCAM2-202ENST00000400546 EIF5BO60841 1220 aaKnown RBP11.72□□□□□ -0.53
NCAM2-202ENST00000400546 UPF2Q9HAU5 1272 aaKnown RBP11.72□□□□□ -0.53
NCAM2-202ENST00000400546 MTUS2Q5JR59 1369 aa11.72□□□□□ -0.53
NCAM2-202ENST00000400546 WDR43Q15061 677 aaKnown RBP eCLIP11.72□□□□□ -0.53
NCAM2-202ENST00000400546 CCDC136Q96JN2 1154 aa11.72□□□□□ -0.53
NCAM2-202ENST00000400546 MRS2Q9HD23 443 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms