RNA–Protein interactions for RNA: ENST00000440577.5

PUM2-209, Transcript of pumilio RNA binding family member 2, humanhuman

TSL 1 (best)

Gene PUM2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM2-209ENST00000440577 NISCHQ9Y2I1 1504 aa11.4□□□□□ -0.59
PUM2-209ENST00000440577 DCAF8L2P0C7V8 631 aa11.28□□□□□ -0.6
PUM2-209ENST00000440577 SHROOM4Q9ULL8 1493 aa10.31□□□□□ -0.76
PUM2-209ENST00000440577 SUPT5HO00267 1087 aaKnown RBP10.29□□□□□ -0.76
PUM2-209ENST00000440577 ABCC9O60706 1549 aa10.05□□□□□ -0.8
PUM2-209ENST00000440577 FAM9AQ8IZU1 332 aaPredicted RBP9.99□□□□□ -0.81
PUM2-209ENST00000440577 PABPN1Q86U42 306 aaKnown RBP eCLIP9.79□□□□□ -0.84
PUM2-209ENST00000440577 APLP2Q06481 763 aa9.76□□□□□ -0.85
PUM2-209ENST00000440577 EHMT2Q96KQ7 1210 aa9.74□□□□□ -0.85
PUM2-209ENST00000440577 TRIM41Q8WV44 630 aa9.65□□□□□ -0.86
PUM2-209ENST00000440577 CCDC180Q9P1Z9 1646 aa9.61□□□□□ -0.87
PUM2-209ENST00000440577 ATP1B4Q9UN42 357 aaPredicted RBP9.54□□□□□ -0.88
PUM2-209ENST00000440577 RANGAP1P46060 587 aaPredicted RBP9.53□□□□□ -0.88
PUM2-209ENST00000440577 UBTFP17480 764 aaKnown RBP9.52□□□□□ -0.88
PUM2-209ENST00000440577 RB1CC1Q8TDY2 1594 aa9.48□□□□□ -0.89
PUM2-209ENST00000440577 MYT1Q01538 1121 aa9.43□□□□□ -0.9
PUM2-209ENST00000440577 SCRIBQ14160 1630 aa9.43□□□□□ -0.9
PUM2-209ENST00000440577 ZCCHC6Q5VYS8 1495 aaKnown RBP9.4□□□□□ -0.9
PUM2-209ENST00000440577 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.39□□□□□ -0.91
PUM2-209ENST00000440577 HNRNPUL2Q1KMD3 747 aaKnown RBP9.39□□□□□ -0.91
PUM2-209ENST00000440577 NACADO15069 1562 aa9.38□□□□□ -0.91
PUM2-209ENST00000440577 TTBK1Q5TCY1 1321 aaPredicted RBP9.37□□□□□ -0.91
PUM2-209ENST00000440577 MYT1LQ9UL68 1186 aa9.34□□□□□ -0.91
PUM2-209ENST00000440577 FBLN2P98095 1184 aa9.32□□□□□ -0.92
PUM2-209ENST00000440577 PELP1Q8IZL8 1130 aaKnown RBP9.29□□□□□ -0.92
PUM2-209ENST00000440577 CHIC1Q5VXU3 224 aa9.14□□□□□ -0.95
PUM2-209ENST00000440577 DCAF1Q9Y4B6 1507 aa9.13□□□□□ -0.95
PUM2-209ENST00000440577 NPM1P06748 294 aaKnown RBP eCLIP9.12□□□□□ -0.95
PUM2-209ENST00000440577 BAZ1BQ9UIG0 1483 aaKnown RBP9.09□□□□□ -0.95
PUM2-209ENST00000440577 ERCC6Q03468 1493 aa9.08□□□□□ -0.96
PUM2-209ENST00000440577 PCGF6Q9BYE7 350 aa9.08□□□□□ -0.96
PUM2-209ENST00000440577 CHMP7Q8WUX9 453 aaPredicted RBP9.05□□□□□ -0.96
PUM2-209ENST00000440577 ITGAEP38570 1179 aa9.04□□□□□ -0.96
PUM2-209ENST00000440577 CDK11AQ9UQ88 783 aaPredicted RBP9.03□□□□□ -0.96
PUM2-209ENST00000440577 CCER1Q8TC90 406 aaPredicted RBP9.03□□□□□ -0.96
PUM2-209ENST00000440577 CSRNP3Q8WYN3 585 aa9.02□□□□□ -0.97
PUM2-209ENST00000440577 MYO15BQ96JP2 1530 aa9.02□□□□□ -0.97
PUM2-209ENST00000440577 BAZ1AQ9NRL2 1556 aaPredicted RBP9.01□□□□□ -0.97
PUM2-209ENST00000440577 PPARGC1BQ86YN6 1023 aaKnown RBP8.98□□□□□ -0.97
PUM2-209ENST00000440577 LOC105371045A0A1W2PR82 267 aa8.97□□□□□ -0.97
PUM2-209ENST00000440577 P3H3Q8IVL6 736 aa8.96□□□□□ -0.97
PUM2-209ENST00000440577 ESF1Q9H501 851 aaKnown RBP8.95□□□□□ -0.98
PUM2-209ENST00000440577 RSF1Q96T23 1441 aaPredicted RBP8.95□□□□□ -0.98
PUM2-209ENST00000440577 FAM50AQ14320 339 aaKnown RBP8.95□□□□□ -0.98
PUM2-209ENST00000440577 ZEB1P37275 1124 aaPredicted RBP8.94□□□□□ -0.98
PUM2-209ENST00000440577 CECR2Q9BXF3 1484 aa8.93□□□□□ -0.98
PUM2-209ENST00000440577 ARID3CA6NKF2 412 aa8.92□□□□□ -0.98
PUM2-209ENST00000440577 PDS5BQ9NTI5 1447 aa8.92□□□□□ -0.98
PUM2-209ENST00000440577 SMARCA2P51531 1590 aa8.92□□□□□ -0.98
PUM2-209ENST00000440577 TRIM52Q96A61 297 aa8.88□□□□□ -0.99
PUM2-209ENST00000440577 ZNF777Q9ULD5 760 aaPredicted RBP8.87□□□□□ -0.99
PUM2-209ENST00000440577 TRIM26Q12899 539 aaPredicted RBP8.86□□□□□ -0.99
PUM2-209ENST00000440577 WRNQ14191 1432 aaPredicted RBP eCLIP8.84□□□□□ -0.99
PUM2-209ENST00000440577 KIF27Q86VH2 1401 aa8.82□□□□□ -1
PUM2-209ENST00000440577 BCANQ96GW7 911 aa8.82□□□□□ -1
PUM2-209ENST00000440577 SLC24A1O60721 1099 aa8.8□□□□□ -1
PUM2-209ENST00000440577 POLR3GLQ9BT43 218 aa8.8□□□□□ -1
PUM2-209ENST00000440577 EEA1Q15075 1411 aa8.79□□□□□ -1
PUM2-209ENST00000440577 SLC4A1APQ9BWU0 796 aaKnown RBP8.78□□□□□ -1
PUM2-209ENST00000440577 CADPSQ9ULU8 1353 aa8.78□□□□□ -1
PUM2-209ENST00000440577 PLEKHD1A6NEE1 506 aa8.78□□□□□ -1
PUM2-209ENST00000440577 TRHP20396 242 aaPredicted RBP8.78□□□□□ -1
PUM2-209ENST00000440577 STAG3Q9UJ98 1225 aa8.77□□□□□ -1.01
PUM2-209ENST00000440577 MROH2BQ7Z745 1585 aa8.75□□□□□ -1.01
PUM2-209ENST00000440577 ATAD2BQ9ULI0 1458 aa8.75□□□□□ -1.01
PUM2-209ENST00000440577 TSPY4P0CV99 314 aa8.75□□□□□ -1.01
PUM2-209ENST00000440577 TSPY10P0CW01 314 aa8.75□□□□□ -1.01
PUM2-209ENST00000440577 KCNH8Q96L42 1107 aa8.75□□□□□ -1.01
PUM2-209ENST00000440577 PLPPR3Q6T4P5 718 aa8.74□□□□□ -1.01
PUM2-209ENST00000440577 ERICH6Q7L0X2 663 aa8.74□□□□□ -1.01
PUM2-209ENST00000440577 MTUS2Q5JR59 1369 aa8.73□□□□□ -1.01
PUM2-209ENST00000440577 CEP164Q9UPV0 1460 aa8.71□□□□□ -1.01
PUM2-209ENST00000440577 CUX2O14529 1486 aa8.7□□□□□ -1.02
PUM2-209ENST00000440577 SOGA1O94964 1423 aa8.7□□□□□ -1.02
PUM2-209ENST00000440577 CCDC88BA6NC98 1476 aa8.69□□□□□ -1.02
PUM2-209ENST00000440577 CHGAP10645 457 aaKnown RBP8.68□□□□□ -1.02
PUM2-209ENST00000440577 ARID4BQ4LE39 1312 aaPredicted RBP8.68□□□□□ -1.02
PUM2-209ENST00000440577 ZNF326Q5BKZ1 582 aaKnown RBP8.67□□□□□ -1.02
PUM2-209ENST00000440577 CARMIL2Q6F5E8 1435 aa8.67□□□□□ -1.02
PUM2-209ENST00000440577 CARMIL1Q5VZK9 1371 aa8.67□□□□□ -1.02
PUM2-209ENST00000440577 TOP2AP11388 1531 aaKnown RBP8.66□□□□□ -1.02
PUM2-209ENST00000440577 ABCC8Q09428 1581 aa8.66□□□□□ -1.02
PUM2-209ENST00000440577 SMARCA4P51532 1647 aa8.66□□□□□ -1.02
PUM2-209ENST00000440577 TDRD9Q8NDG6 1382 aaKnown RBP8.66□□□□□ -1.02
PUM2-209ENST00000440577 EIF4G1Q04637 1599 aaKnown RBP8.66□□□□□ -1.02
PUM2-209ENST00000440577 CLIP1P30622 1438 aa8.66□□□□□ -1.02
PUM2-209ENST00000440577 GOLGA3Q08378 1498 aa8.66□□□□□ -1.02
PUM2-209ENST00000440577 OSCARQ8IYS5 282 aa8.65□□□□□ -1.02
PUM2-209ENST00000440577 NCAPD3P42695 1498 aa8.65□□□□□ -1.03
PUM2-209ENST00000440577 NEUROD1Q13562 356 aa8.64□□□□□ -1.03
PUM2-209ENST00000440577 FANCD2Q9BXW9 1451 aa8.63□□□□□ -1.03
PUM2-209ENST00000440577 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.63□□□□□ -1.034e-8■□□□□ 10.9
PUM2-209ENST00000440577 CFDP1Q9UEE9 299 aaPredicted RBP8.61□□□□□ -1.03
PUM2-209ENST00000440577 CENPBP07199 599 aaPredicted RBP8.6□□□□□ -1.03
PUM2-209ENST00000440577 CNGB1Q14028 1251 aaPredicted RBP8.59□□□□□ -1.03
PUM2-209ENST00000440577 CHIC2Q9UKJ5 165 aa8.59□□□□□ -1.03
PUM2-209ENST00000440577 ACIN1Q9UKV3 1341 aaKnown RBP8.59□□□□□ -1.03
PUM2-209ENST00000440577 WIZO95785 1651 aa8.58□□□□□ -1.04
PUM2-209ENST00000440577 NEFLP07196 543 aa8.57□□□□□ -1.04
PUM2-209ENST00000440577 PPP1R15AO75807 674 aaPredicted RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms