RNA–Protein interactions for RNA: ENST00000478089.1

FBXO42-204, Transcript of F-box protein 42, humanhuman

TSL 1 (best)

Gene FBXO42, Length 2,920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO42-204ENST00000478089 CHIC1Q5VXU3 224 aa17.06■□□□□ 0.32
FBXO42-204ENST00000478089 AEBP2Q6ZN18 517 aaPredicted RBP16.19■□□□□ 0.18
FBXO42-204ENST00000478089 SLC24A1O60721 1099 aa16.09■□□□□ 0.17
FBXO42-204ENST00000478089 EHMT2Q96KQ7 1210 aa15.67■□□□□ 0.1
FBXO42-204ENST00000478089 PHF23Q9BUL5 403 aaPredicted RBP15.41■□□□□ 0.06
FBXO42-204ENST00000478089 NISCHQ9Y2I1 1504 aa15.1■□□□□ 0.01
FBXO42-204ENST00000478089 PLPPR3Q6T4P5 718 aa15.09■□□□□ 0.01
FBXO42-204ENST00000478089 RTN4Q9NQC3 1192 aaKnown RBP14.89□□□□□ -0.03
FBXO42-204ENST00000478089 CSRNP3Q8WYN3 585 aa14.73□□□□□ -0.05
FBXO42-204ENST00000478089 KCNA4P22459 653 aa14.67□□□□□ -0.06
FBXO42-204ENST00000478089 AMER1Q5JTC6 1135 aaPredicted RBP14.52□□□□□ -0.09
FBXO42-204ENST00000478089 MYT1Q01538 1121 aa14.42□□□□□ -0.1
FBXO42-204ENST00000478089 NCBP3Q53F19 620 aaKnown RBP14.36□□□□□ -0.11
FBXO42-204ENST00000478089 PELP1Q8IZL8 1130 aaKnown RBP14.26□□□□□ -0.13
FBXO42-204ENST00000478089 TTBK1Q5TCY1 1321 aaPredicted RBP14.24□□□□□ -0.13
FBXO42-204ENST00000478089 DAXXQ9UER7 740 aaPredicted RBP14.19□□□□□ -0.14
FBXO42-204ENST00000478089 PRKCSHP14314 528 aaPredicted RBP14.07□□□□□ -0.16
FBXO42-204ENST00000478089 SLC4A1APQ9BWU0 796 aaKnown RBP14.07□□□□□ -0.16
FBXO42-204ENST00000478089 APLP2Q06481 763 aa13.92□□□□□ -0.18
FBXO42-204ENST00000478089 ADRA2BP18089 450 aa13.85□□□□□ -0.19
FBXO42-204ENST00000478089 ERICH6Q7L0X2 663 aa13.8□□□□□ -0.2
FBXO42-204ENST00000478089 ZBTB22O15209 634 aa13.66□□□□□ -0.22
FBXO42-204ENST00000478089 TIMELESSQ9UNS1 1208 aa13.66□□□□□ -0.22
FBXO42-204ENST00000478089 TAOK2Q9UL54 1235 aa13.64□□□□□ -0.23
FBXO42-204ENST00000478089 ARXQ96QS3 562 aa13.58□□□□□ -0.24
FBXO42-204ENST00000478089 CCDC180Q9P1Z9 1646 aa13.53□□□□□ -0.24
FBXO42-204ENST00000478089 BCANQ96GW7 911 aa13.47□□□□□ -0.25
FBXO42-204ENST00000478089 TULP1O00294 542 aaPredicted RBP13.44□□□□□ -0.26
FBXO42-204ENST00000478089 PLCB2Q00722 1185 aa13.42□□□□□ -0.26
FBXO42-204ENST00000478089 TPRNQ4KMQ1 711 aa13.41□□□□□ -0.26
FBXO42-204ENST00000478089 HAP1P54257 671 aaPredicted RBP13.24□□□□□ -0.29
FBXO42-204ENST00000478089 NPM3O75607 178 aaKnown RBP13.19□□□□□ -0.3
FBXO42-204ENST00000478089 HOMEZQ8IX15 550 aa13.16□□□□□ -0.3
FBXO42-204ENST00000478089 PPP6R1Q9UPN7 881 aa13.15□□□□□ -0.3
FBXO42-204ENST00000478089 FKBP8Q14318 412 aa13.14□□□□□ -0.31
FBXO42-204ENST00000478089 SENP3Q9H4L4 574 aaPredicted RBP13.12□□□□□ -0.31
FBXO42-204ENST00000478089 GTF3C3Q9Y5Q9 886 aa13.07□□□□□ -0.32
FBXO42-204ENST00000478089 EIF5BO60841 1220 aaKnown RBP13.06□□□□□ -0.32
FBXO42-204ENST00000478089 PPP4R3CPQ6ZMV5 832 aa13.03□□□□□ -0.32
FBXO42-204ENST00000478089 RANGAP1P46060 587 aaPredicted RBP12.96□□□□□ -0.33
FBXO42-204ENST00000478089 VSIG10Q8N0Z9 540 aa12.94□□□□□ -0.34
FBXO42-204ENST00000478089 KDM2AQ9Y2K7 1162 aa12.89□□□□□ -0.35
FBXO42-204ENST00000478089 PODXL2Q9NZ53 605 aa12.89□□□□□ -0.35
FBXO42-204ENST00000478089 KLHL34Q8N239 644 aa12.85□□□□□ -0.35
FBXO42-204ENST00000478089 FOXD4L1Q9NU39 408 aa12.83□□□□□ -0.36
FBXO42-204ENST00000478089 BCL11AQ9H165 835 aa12.82□□□□□ -0.36
FBXO42-204ENST00000478089 TMEM132AQ24JP5 1023 aa12.81□□□□□ -0.36
FBXO42-204ENST00000478089 FBLN2P98095 1184 aa12.79□□□□□ -0.36
FBXO42-204ENST00000478089 MYO15BQ96JP2 1530 aa12.79□□□□□ -0.36
FBXO42-204ENST00000478089 ZCCHC6Q5VYS8 1495 aaKnown RBP12.75□□□□□ -0.37
FBXO42-204ENST00000478089 PLEKHG5O94827 1062 aa12.67□□□□□ -0.38
FBXO42-204ENST00000478089 C14orf37Q86TY3 774 aa12.66□□□□□ -0.38
FBXO42-204ENST00000478089 SHROOM4Q9ULL8 1493 aa12.65□□□□□ -0.39
FBXO42-204ENST00000478089 DCAF8L2P0C7V8 631 aa12.6□□□□□ -0.39
FBXO42-204ENST00000478089 FAM9AQ8IZU1 332 aaPredicted RBP12.57□□□□□ -0.4
FBXO42-204ENST00000478089 NACADO15069 1562 aa12.56□□□□□ -0.4
FBXO42-204ENST00000478089 NPM2Q86SE8 214 aaKnown RBP12.54□□□□□ -0.4
FBXO42-204ENST00000478089 RB1CC1Q8TDY2 1594 aa12.51□□□□□ -0.41
FBXO42-204ENST00000478089 DCAF1Q9Y4B6 1507 aa12.51□□□□□ -0.41
FBXO42-204ENST00000478089 SUPT5HO00267 1087 aaKnown RBP12.48□□□□□ -0.41
FBXO42-204ENST00000478089 TRIM26Q12899 539 aaPredicted RBP12.45□□□□□ -0.42
FBXO42-204ENST00000478089 UBTFP17480 764 aaKnown RBP12.37□□□□□ -0.43
FBXO42-204ENST00000478089 PAXIP1Q6ZW49 1069 aaPredicted RBP12.34□□□□□ -0.43
FBXO42-204ENST00000478089 HRCP23327 699 aa12.33□□□□□ -0.44
FBXO42-204ENST00000478089 ABCC9O60706 1549 aa12.32□□□□□ -0.44
FBXO42-204ENST00000478089 FBXO3Q9UK99 471 aa12.31□□□□□ -0.44
FBXO42-204ENST00000478089 CFAP44Q96MT7 982 aa12.29□□□□□ -0.44
FBXO42-204ENST00000478089 TSHZ2Q9NRE2 1034 aa12.29□□□□□ -0.44
FBXO42-204ENST00000478089 PKD2Q13563 968 aa12.26□□□□□ -0.45
FBXO42-204ENST00000478089 NPM1P06748 294 aaKnown RBP eCLIP12.24□□□□□ -0.45
FBXO42-204ENST00000478089 NBR1Q14596 966 aa12.24□□□□□ -0.45
FBXO42-204ENST00000478089 FOXD1Q16676 465 aa12.24□□□□□ -0.45
FBXO42-204ENST00000478089 CNKSR2Q8WXI2 1034 aa12.21□□□□□ -0.46
FBXO42-204ENST00000478089 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.2□□□□□ -0.46
FBXO42-204ENST00000478089 BBXQ8WY36 941 aaPredicted RBP12.2□□□□□ -0.46
FBXO42-204ENST00000478089 UNC13AQ9UPW8 1703 aa12.19□□□□□ -0.46
FBXO42-204ENST00000478089 UBE2Q2Q8WVN8 375 aa12.18□□□□□ -0.46
FBXO42-204ENST00000478089 DNAJC5BQ9UF47 199 aa12.14□□□□□ -0.47
FBXO42-204ENST00000478089 PDIA4P13667 645 aaKnown RBP12.12□□□□□ -0.47
FBXO42-204ENST00000478089 LOC105371045A0A1W2PR82 267 aa12.09□□□□□ -0.47
FBXO42-204ENST00000478089 ATXN8OSP0DMR3 200 aa12.08□□□□□ -0.48
FBXO42-204ENST00000478089 IFNLR1Q8IU57 520 aaPredicted RBP12.06□□□□□ -0.48
FBXO42-204ENST00000478089 DNAJC5Q9H3Z4 198 aa12.04□□□□□ -0.48
FBXO42-204ENST00000478089 BICRAQ9NZM4 1560 aa12.02□□□□□ -0.49
FBXO42-204ENST00000478089 SCRIBQ14160 1630 aa12□□□□□ -0.49
FBXO42-204ENST00000478089 SLC4A2P04920 1241 aa12□□□□□ -0.49
FBXO42-204ENST00000478089 SPRYD3Q8NCJ5 442 aa11.98□□□□□ -0.49
FBXO42-204ENST00000478089 VASPP50552 380 aaPredicted RBP11.97□□□□□ -0.49
FBXO42-204ENST00000478089 TRHP20396 242 aaPredicted RBP11.94□□□□□ -0.5
FBXO42-204ENST00000478089 PDE4CQ08493 712 aa11.93□□□□□ -0.5
FBXO42-204ENST00000478089 PKNOX2Q96KN3 472 aa11.9□□□□□ -0.5
FBXO42-204ENST00000478089 CENPBP07199 599 aaPredicted RBP11.87□□□□□ -0.51
FBXO42-204ENST00000478089 SCAF1Q9H7N4 1312 aaKnown RBP11.87□□□□□ -0.51
FBXO42-204ENST00000478089 CHMP4AQ9BY43 222 aa11.86□□□□□ -0.51
FBXO42-204ENST00000478089 NEFLP07196 543 aa11.86□□□□□ -0.51
FBXO42-204ENST00000478089 BRPF1P55201 1214 aaPredicted RBP11.86□□□□□ -0.51
FBXO42-204ENST00000478089 PIAS4Q8N2W9 510 aaPredicted RBP11.84□□□□□ -0.51
FBXO42-204ENST00000478089 RSF1Q96T23 1441 aaPredicted RBP11.82□□□□□ -0.52
FBXO42-204ENST00000478089 MYCNP04198 464 aaPredicted RBP11.81□□□□□ -0.52
FBXO42-204ENST00000478089 TAF7LQ5H9L4 462 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 126.6 ms