RNA–Protein interactions for RNA: ENST00000523067.5

PTK2-242, Transcript of protein tyrosine kinase 2, humanhuman

TSL 4

Gene PTK2, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2-242ENST00000523067 NISCHQ9Y2I1 1504 aa18.38■□□□□ 0.53
PTK2-242ENST00000523067 AEBP2Q6ZN18 517 aaPredicted RBP17.5■□□□□ 0.39
PTK2-242ENST00000523067 CHIC1Q5VXU3 224 aa16.81■□□□□ 0.28
PTK2-242ENST00000523067 CCDC180Q9P1Z9 1646 aa16.21■□□□□ 0.19
PTK2-242ENST00000523067 ABCC9O60706 1549 aa15.89■□□□□ 0.13
PTK2-242ENST00000523067 DCAF8L2P0C7V8 631 aa15.46■□□□□ 0.07
PTK2-242ENST00000523067 NACADO15069 1562 aa15.31■□□□□ 0.04
PTK2-242ENST00000523067 RB1CC1Q8TDY2 1594 aa15.29■□□□□ 0.04
PTK2-242ENST00000523067 ZCCHC6Q5VYS8 1495 aaKnown RBP15.29■□□□□ 0.04
PTK2-242ENST00000523067 MYO15BQ96JP2 1530 aa15.25■□□□□ 0.03
PTK2-242ENST00000523067 DCAF1Q9Y4B6 1507 aa15.21■□□□□ 0.03
PTK2-242ENST00000523067 PABPN1Q86U42 306 aaKnown RBP eCLIP14.94□□□□□ -0.02
PTK2-242ENST00000523067 PHF23Q9BUL5 403 aaPredicted RBP14.91□□□□□ -0.02
PTK2-242ENST00000523067 SCRIBQ14160 1630 aa14.81□□□□□ -0.04
PTK2-242ENST00000523067 UNC13AQ9UPW8 1703 aa14.8□□□□□ -0.04
PTK2-242ENST00000523067 BICRAQ9NZM4 1560 aa14.79□□□□□ -0.04
PTK2-242ENST00000523067 SHROOM4Q9ULL8 1493 aa14.69□□□□□ -0.06
PTK2-242ENST00000523067 SENP3Q9H4L4 574 aaPredicted RBP14.61□□□□□ -0.07
PTK2-242ENST00000523067 DNAJC5BQ9UF47 199 aa14.59□□□□□ -0.07
PTK2-242ENST00000523067 EIF4G1Q04637 1599 aaKnown RBP14.41□□□□□ -0.1
PTK2-242ENST00000523067 CC2D2AQ9P2K1 1620 aa14.33□□□□□ -0.12
PTK2-242ENST00000523067 CECR2Q9BXF3 1484 aa14.31□□□□□ -0.12
PTK2-242ENST00000523067 BAZ1AQ9NRL2 1556 aaPredicted RBP14.23□□□□□ -0.13
PTK2-242ENST00000523067 SMARCA4P51532 1647 aa14.19□□□□□ -0.14
PTK2-242ENST00000523067 NCAPD3P42695 1498 aa14.18□□□□□ -0.14
PTK2-242ENST00000523067 ATAD2BQ9ULI0 1458 aa14.17□□□□□ -0.14
PTK2-242ENST00000523067 MROH2BQ7Z745 1585 aa14.15□□□□□ -0.14
PTK2-242ENST00000523067 SMARCA2P51531 1590 aa14.13□□□□□ -0.15
PTK2-242ENST00000523067 RSF1Q96T23 1441 aaPredicted RBP14.07□□□□□ -0.16
PTK2-242ENST00000523067 PEG3Q9GZU2 1588 aa14.06□□□□□ -0.16
PTK2-242ENST00000523067 BAZ1BQ9UIG0 1483 aaKnown RBP14.04□□□□□ -0.16
PTK2-242ENST00000523067 HMGXB3Q12766 1538 aa14.03□□□□□ -0.16
PTK2-242ENST00000523067 WIZO95785 1651 aa13.95□□□□□ -0.18
PTK2-242ENST00000523067 SUPT5HO00267 1087 aaKnown RBP13.84□□□□□ -0.19
PTK2-242ENST00000523067 TOP2AP11388 1531 aaKnown RBP13.84□□□□□ -0.19
PTK2-242ENST00000523067 POTEDQ86YR6 584 aa13.83□□□□□ -0.2
PTK2-242ENST00000523067 CADPSQ9ULU8 1353 aa13.79□□□□□ -0.2
PTK2-242ENST00000523067 NESP48681 1621 aa13.75□□□□□ -0.21
PTK2-242ENST00000523067 FOXD1Q16676 465 aa13.74□□□□□ -0.21
PTK2-242ENST00000523067 CCDC88BA6NC98 1476 aa13.73□□□□□ -0.21
PTK2-242ENST00000523067 LAMC3Q9Y6N6 1575 aa13.71□□□□□ -0.21
PTK2-242ENST00000523067 PDS5BQ9NTI5 1447 aa13.71□□□□□ -0.22
PTK2-242ENST00000523067 ERCC6Q03468 1493 aa13.7□□□□□ -0.22
PTK2-242ENST00000523067 CFTRP13569 1480 aa13.67□□□□□ -0.22
PTK2-242ENST00000523067 FANCD2Q9BXW9 1451 aa13.58□□□□□ -0.24
PTK2-242ENST00000523067 CEP164Q9UPV0 1460 aa13.54□□□□□ -0.24
PTK2-242ENST00000523067 CUX2O14529 1486 aa13.52□□□□□ -0.25
PTK2-242ENST00000523067 MRC2Q9UBG0 1479 aa13.5□□□□□ -0.25
PTK2-242ENST00000523067 PLPPR3Q6T4P5 718 aa13.49□□□□□ -0.25
PTK2-242ENST00000523067 KIF21AQ7Z4S6 1674 aa13.49□□□□□ -0.25
PTK2-242ENST00000523067 THOC2Q8NI27 1593 aaKnown RBP13.45□□□□□ -0.26
PTK2-242ENST00000523067 WDR62O43379 1518 aa13.42□□□□□ -0.26
PTK2-242ENST00000523067 URB2Q14146 1524 aaKnown RBP13.41□□□□□ -0.26
PTK2-242ENST00000523067 ABCC8Q09428 1581 aa13.41□□□□□ -0.26
PTK2-242ENST00000523067 PRDM2Q13029 1718 aa13.4□□□□□ -0.26
PTK2-242ENST00000523067 TOPBP1Q92547 1522 aa13.35□□□□□ -0.27
PTK2-242ENST00000523067 DNMBPQ6XZF7 1577 aa13.32□□□□□ -0.28
PTK2-242ENST00000523067 IFT140Q96RY7 1462 aa13.27□□□□□ -0.29
PTK2-242ENST00000523067 SOGA1O94964 1423 aa13.26□□□□□ -0.29
PTK2-242ENST00000523067 CUX1P39880 1505 aa13.26□□□□□ -0.29
PTK2-242ENST00000523067 WRNQ14191 1432 aaPredicted RBP eCLIP13.26□□□□□ -0.29
PTK2-242ENST00000523067 POLA1P09884 1462 aaPredicted RBP13.24□□□□□ -0.29
PTK2-242ENST00000523067 FGD5Q6ZNL6 1462 aa13.22□□□□□ -0.29
PTK2-242ENST00000523067 PPP6R1Q9UPN7 881 aa13.2□□□□□ -0.3
PTK2-242ENST00000523067 RAD54L2Q9Y4B4 1467 aa13.2□□□□□ -0.3
PTK2-242ENST00000523067 ZNF608Q9ULD9 1512 aaPredicted RBP13.18□□□□□ -0.3
PTK2-242ENST00000523067 TDRD9Q8NDG6 1382 aaKnown RBP13.18□□□□□ -0.3
PTK2-242ENST00000523067 AQRO60306 1485 aaKnown RBP eCLIP13.16□□□□□ -0.33e-6■■■■□ 24.7
PTK2-242ENST00000523067 TOP2BQ02880 1626 aa13.15□□□□□ -0.3
PTK2-242ENST00000523067 TARBP1Q13395 1621 aaKnown RBP13.15□□□□□ -0.3
PTK2-242ENST00000523067 ADRA2BP18089 450 aa13.14□□□□□ -0.31
PTK2-242ENST00000523067 SYNJ1O43426 1573 aa13.13□□□□□ -0.31
PTK2-242ENST00000523067 DNAJC5Q9H3Z4 198 aa13.12□□□□□ -0.31
PTK2-242ENST00000523067 BIVM-ERCC5R4GMW8 1640 aa13.11□□□□□ -0.31
PTK2-242ENST00000523067 ABCA10Q8WWZ4 1543 aa13.11□□□□□ -0.31
PTK2-242ENST00000523067 OSCARQ8IYS5 282 aa13.09□□□□□ -0.31
PTK2-242ENST00000523067 TRIM41Q8WV44 630 aa13.08□□□□□ -0.32
PTK2-242ENST00000523067 GAPVD1Q14C86 1478 aa13.07□□□□□ -0.32
PTK2-242ENST00000523067 WDR97A6NE52 1622 aa13.06□□□□□ -0.32
PTK2-242ENST00000523067 GRIN2BQ13224 1484 aa13.06□□□□□ -0.32
PTK2-242ENST00000523067 EIF4G3O43432 1585 aaKnown RBP13.06□□□□□ -0.32
PTK2-242ENST00000523067 FBLN2P98095 1184 aa13.05□□□□□ -0.32
PTK2-242ENST00000523067 CHMP7Q8WUX9 453 aaPredicted RBP13.04□□□□□ -0.32
PTK2-242ENST00000523067 SNAPC4Q5SXM2 1469 aa12.99□□□□□ -0.33
PTK2-242ENST00000523067 MAGI1Q96QZ7 1491 aaPredicted RBP12.99□□□□□ -0.33
PTK2-242ENST00000523067 KIF27Q86VH2 1401 aa12.99□□□□□ -0.33
PTK2-242ENST00000523067 ABCA5Q8WWZ7 1642 aa12.98□□□□□ -0.33
PTK2-242ENST00000523067 IGF1RP08069 1367 aa12.96□□□□□ -0.33
PTK2-242ENST00000523067 SYNJ2O15056 1496 aa12.95□□□□□ -0.34
PTK2-242ENST00000523067 ERICH3Q5RHP9 1530 aa12.94□□□□□ -0.34
PTK2-242ENST00000523067 FHAD1B1AJZ9 1412 aa12.94□□□□□ -0.34
PTK2-242ENST00000523067 PBRM1Q86U86 1689 aa12.89□□□□□ -0.35
PTK2-242ENST00000523067 CARMIL1Q5VZK9 1371 aa12.88□□□□□ -0.35
PTK2-242ENST00000523067 GRIN2AQ12879 1464 aa12.86□□□□□ -0.35
PTK2-242ENST00000523067 RUSC2Q8N2Y8 1516 aa12.86□□□□□ -0.35
PTK2-242ENST00000523067 ADAMTS12P58397 1594 aa12.85□□□□□ -0.35
PTK2-242ENST00000523067 CHD1O14646 1710 aa12.85□□□□□ -0.35
PTK2-242ENST00000523067 CSRNP3Q8WYN3 585 aa12.84□□□□□ -0.35
PTK2-242ENST00000523067 PIAS4Q8N2W9 510 aaPredicted RBP12.83□□□□□ -0.36
PTK2-242ENST00000523067 NUP160Q12769 1436 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms