RNA–Protein interactions for RNA: ENST00000521907.5

PTK2-235, Transcript of protein tyrosine kinase 2, humanhuman

TSL 4

Gene PTK2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2-235ENST00000521907 AEBP2Q6ZN18 517 aaPredicted RBP19.47■□□□□ 0.71
PTK2-235ENST00000521907 CHIC1Q5VXU3 224 aa18.91■□□□□ 0.62
PTK2-235ENST00000521907 NISCHQ9Y2I1 1504 aa18.54■□□□□ 0.56
PTK2-235ENST00000521907 SENP3Q9H4L4 574 aaPredicted RBP16.72■□□□□ 0.27
PTK2-235ENST00000521907 PHF23Q9BUL5 403 aaPredicted RBP16.63■□□□□ 0.25
PTK2-235ENST00000521907 CCDC180Q9P1Z9 1646 aa16.52■□□□□ 0.24
PTK2-235ENST00000521907 ABCC9O60706 1549 aa16.43■□□□□ 0.22
PTK2-235ENST00000521907 FOXD1Q16676 465 aa15.66■□□□□ 0.1
PTK2-235ENST00000521907 POTEDQ86YR6 584 aa15.6■□□□□ 0.09
PTK2-235ENST00000521907 RB1CC1Q8TDY2 1594 aa15.6■□□□□ 0.09
PTK2-235ENST00000521907 DNAJC5BQ9UF47 199 aa15.54■□□□□ 0.08
PTK2-235ENST00000521907 NACADO15069 1562 aa15.53■□□□□ 0.08
PTK2-235ENST00000521907 PLPPR3Q6T4P5 718 aa15.52■□□□□ 0.08
PTK2-235ENST00000521907 DCAF8L2P0C7V8 631 aa15.5■□□□□ 0.07
PTK2-235ENST00000521907 ZCCHC6Q5VYS8 1495 aaKnown RBP15.46■□□□□ 0.07
PTK2-235ENST00000521907 MYO15BQ96JP2 1530 aa15.38■□□□□ 0.05
PTK2-235ENST00000521907 DCAF1Q9Y4B6 1507 aa15.31■□□□□ 0.04
PTK2-235ENST00000521907 UNC13AQ9UPW8 1703 aa15.26■□□□□ 0.03
PTK2-235ENST00000521907 PABPN1Q86U42 306 aaKnown RBP eCLIP15.22■□□□□ 0.03
PTK2-235ENST00000521907 SCRIBQ14160 1630 aa15.14■□□□□ 0.01
PTK2-235ENST00000521907 BICRAQ9NZM4 1560 aa15.12■□□□□ 0.01
PTK2-235ENST00000521907 SHROOM4Q9ULL8 1493 aa14.97□□□□□ -0.01
PTK2-235ENST00000521907 MSH5O43196 834 aa14.91□□□□□ -0.02
PTK2-235ENST00000521907 CC2D2AQ9P2K1 1620 aa14.86□□□□□ -0.03
PTK2-235ENST00000521907 CECR2Q9BXF3 1484 aa14.84□□□□□ -0.03
PTK2-235ENST00000521907 EIF4G1Q04637 1599 aaKnown RBP14.78□□□□□ -0.04
PTK2-235ENST00000521907 DNAJC5Q9H3Z4 198 aa14.74□□□□□ -0.05
PTK2-235ENST00000521907 ADRA2BP18089 450 aa14.56□□□□□ -0.08
PTK2-235ENST00000521907 PPP6R1Q9UPN7 881 aa14.56□□□□□ -0.08
PTK2-235ENST00000521907 PIAS4Q8N2W9 510 aaPredicted RBP14.44□□□□□ -0.1
PTK2-235ENST00000521907 SMARCA4P51532 1647 aa14.43□□□□□ -0.1
PTK2-235ENST00000521907 BAZ1AQ9NRL2 1556 aaPredicted RBP14.39□□□□□ -0.11
PTK2-235ENST00000521907 ATAD2BQ9ULI0 1458 aa14.34□□□□□ -0.11
PTK2-235ENST00000521907 SMARCA2P51531 1590 aa14.32□□□□□ -0.12
PTK2-235ENST00000521907 MROH2BQ7Z745 1585 aa14.32□□□□□ -0.12
PTK2-235ENST00000521907 CUX2O14529 1486 aa14.31□□□□□ -0.12
PTK2-235ENST00000521907 NCAPD3P42695 1498 aa14.31□□□□□ -0.12
PTK2-235ENST00000521907 HMGXB3Q12766 1538 aa14.28□□□□□ -0.12
PTK2-235ENST00000521907 PEG3Q9GZU2 1588 aa14.25□□□□□ -0.13
PTK2-235ENST00000521907 BAZ1BQ9UIG0 1483 aaKnown RBP14.25□□□□□ -0.13
PTK2-235ENST00000521907 ERCC6Q03468 1493 aa14.24□□□□□ -0.13
PTK2-235ENST00000521907 WIZO95785 1651 aa14.17□□□□□ -0.14
PTK2-235ENST00000521907 RSF1Q96T23 1441 aaPredicted RBP14.11□□□□□ -0.15
PTK2-235ENST00000521907 NESP48681 1621 aa14.05□□□□□ -0.16
PTK2-235ENST00000521907 TOP2AP11388 1531 aaKnown RBP14.01□□□□□ -0.17
PTK2-235ENST00000521907 THOC2Q8NI27 1593 aaKnown RBP14□□□□□ -0.17
PTK2-235ENST00000521907 LAMC3Q9Y6N6 1575 aa13.97□□□□□ -0.17
PTK2-235ENST00000521907 KIF21AQ7Z4S6 1674 aa13.9□□□□□ -0.18
PTK2-235ENST00000521907 CADPSQ9ULU8 1353 aa13.89□□□□□ -0.19
PTK2-235ENST00000521907 PDS5BQ9NTI5 1447 aa13.89□□□□□ -0.19
PTK2-235ENST00000521907 CCDC88BA6NC98 1476 aa13.81□□□□□ -0.2
PTK2-235ENST00000521907 CFTRP13569 1480 aa13.81□□□□□ -0.2
PTK2-235ENST00000521907 FANCD2Q9BXW9 1451 aa13.78□□□□□ -0.2
PTK2-235ENST00000521907 MRC2Q9UBG0 1479 aa13.78□□□□□ -0.2
PTK2-235ENST00000521907 CEP164Q9UPV0 1460 aa13.77□□□□□ -0.21
PTK2-235ENST00000521907 WDR62O43379 1518 aa13.75□□□□□ -0.21
PTK2-235ENST00000521907 PRDM2Q13029 1718 aa13.75□□□□□ -0.21
PTK2-235ENST00000521907 TRIM41Q8WV44 630 aa13.74□□□□□ -0.21
PTK2-235ENST00000521907 SUPT5HO00267 1087 aaKnown RBP13.72□□□□□ -0.21
PTK2-235ENST00000521907 KCNA4P22459 653 aa13.69□□□□□ -0.22
PTK2-235ENST00000521907 PPP4R3CPQ6ZMV5 832 aa13.68□□□□□ -0.22
PTK2-235ENST00000521907 URB2Q14146 1524 aaKnown RBP13.65□□□□□ -0.22
PTK2-235ENST00000521907 OSCARQ8IYS5 282 aa13.56□□□□□ -0.24
PTK2-235ENST00000521907 TOPBP1Q92547 1522 aa13.55□□□□□ -0.24
PTK2-235ENST00000521907 DNMBPQ6XZF7 1577 aa13.54□□□□□ -0.24
PTK2-235ENST00000521907 ABCC8Q09428 1581 aa13.48□□□□□ -0.25
PTK2-235ENST00000521907 IFT140Q96RY7 1462 aa13.47□□□□□ -0.25
PTK2-235ENST00000521907 NCBP3Q53F19 620 aaKnown RBP13.46□□□□□ -0.25
PTK2-235ENST00000521907 CUX1P39880 1505 aa13.44□□□□□ -0.26
PTK2-235ENST00000521907 ZNF608Q9ULD9 1512 aaPredicted RBP13.44□□□□□ -0.26
PTK2-235ENST00000521907 RIMBP3CA6NJZ7 1639 aa13.44□□□□□ -0.26
PTK2-235ENST00000521907 RIMBP3BA6NNM3 1639 aa13.44□□□□□ -0.26
PTK2-235ENST00000521907 RIMBP3Q9UFD9 1639 aa13.44□□□□□ -0.26
PTK2-235ENST00000521907 POLA1P09884 1462 aaPredicted RBP13.43□□□□□ -0.26
PTK2-235ENST00000521907 FGD5Q6ZNL6 1462 aa13.41□□□□□ -0.26
PTK2-235ENST00000521907 EIF4G3O43432 1585 aaKnown RBP13.41□□□□□ -0.26
PTK2-235ENST00000521907 SCAF1Q9H7N4 1312 aaKnown RBP13.4□□□□□ -0.26
PTK2-235ENST00000521907 TARBP1Q13395 1621 aaKnown RBP13.4□□□□□ -0.26
PTK2-235ENST00000521907 RAD54L2Q9Y4B4 1467 aa13.38□□□□□ -0.27
PTK2-235ENST00000521907 ARHGEF11O15085 1522 aa13.38□□□□□ -0.27
PTK2-235ENST00000521907 SOGA1O94964 1423 aa13.34□□□□□ -0.27
PTK2-235ENST00000521907 AQRO60306 1485 aaKnown RBP eCLIP13.34□□□□□ -0.273e-6■■■■□ 24.7
PTK2-235ENST00000521907 SYNJ1O43426 1573 aa13.32□□□□□ -0.28
PTK2-235ENST00000521907 WRNQ14191 1432 aaPredicted RBP eCLIP13.31□□□□□ -0.28
PTK2-235ENST00000521907 WDR97A6NE52 1622 aa13.31□□□□□ -0.28
PTK2-235ENST00000521907 BIVM-ERCC5R4GMW8 1640 aa13.3□□□□□ -0.28
PTK2-235ENST00000521907 TDRD9Q8NDG6 1382 aaKnown RBP13.3□□□□□ -0.28
PTK2-235ENST00000521907 TOP2BQ02880 1626 aa13.29□□□□□ -0.28
PTK2-235ENST00000521907 CHD1O14646 1710 aa13.27□□□□□ -0.28
PTK2-235ENST00000521907 CNKSR2Q8WXI2 1034 aa13.26□□□□□ -0.29
PTK2-235ENST00000521907 ABCA10Q8WWZ4 1543 aa13.24□□□□□ -0.29
PTK2-235ENST00000521907 SNAPC4Q5SXM2 1469 aa13.24□□□□□ -0.29
PTK2-235ENST00000521907 CYB5RLQ6IPT4 315 aa13.24□□□□□ -0.29
PTK2-235ENST00000521907 PBRM1Q86U86 1689 aa13.23□□□□□ -0.29
PTK2-235ENST00000521907 ABCA5Q8WWZ7 1642 aa13.23□□□□□ -0.29
PTK2-235ENST00000521907 ARAP1Q96P48 1450 aa13.22□□□□□ -0.29
PTK2-235ENST00000521907 NPM3O75607 178 aaKnown RBP13.21□□□□□ -0.29
PTK2-235ENST00000521907 GRIN2BQ13224 1484 aa13.21□□□□□ -0.3
PTK2-235ENST00000521907 GAPVD1Q14C86 1478 aa13.21□□□□□ -0.3
PTK2-235ENST00000521907 MAGI1Q96QZ7 1491 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms