RNA–Protein interactions for RNA: ENST00000523803.5

PTK2-252, Transcript of protein tyrosine kinase 2, humanhuman

TSL 3

Gene PTK2, Length 750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2-252ENST00000523803 NISCHQ9Y2I1 1504 aa20.68■□□□□ 0.9
PTK2-252ENST00000523803 CCDC180Q9P1Z9 1646 aa18.46■□□□□ 0.55
PTK2-252ENST00000523803 ABCC9O60706 1549 aa18.43■□□□□ 0.54
PTK2-252ENST00000523803 RB1CC1Q8TDY2 1594 aa17.53■□□□□ 0.4
PTK2-252ENST00000523803 NACADO15069 1562 aa17.45■□□□□ 0.38
PTK2-252ENST00000523803 DCAF8L2P0C7V8 631 aa17.43■□□□□ 0.38
PTK2-252ENST00000523803 AEBP2Q6ZN18 517 aaPredicted RBP17.4■□□□□ 0.38
PTK2-252ENST00000523803 DNAJC5BQ9UF47 199 aa17.29■□□□□ 0.36
PTK2-252ENST00000523803 MYO15BQ96JP2 1530 aa17.23■□□□□ 0.35
PTK2-252ENST00000523803 PABPN1Q86U42 306 aaKnown RBP eCLIP17.21■□□□□ 0.35
PTK2-252ENST00000523803 UNC13AQ9UPW8 1703 aa17.18■□□□□ 0.34
PTK2-252ENST00000523803 ZCCHC6Q5VYS8 1495 aaKnown RBP17.15■□□□□ 0.34
PTK2-252ENST00000523803 BICRAQ9NZM4 1560 aa17.09■□□□□ 0.33
PTK2-252ENST00000523803 DCAF1Q9Y4B6 1507 aa17.06■□□□□ 0.32
PTK2-252ENST00000523803 SCRIBQ14160 1630 aa16.87■□□□□ 0.29
PTK2-252ENST00000523803 SHROOM4Q9ULL8 1493 aa16.77■□□□□ 0.28
PTK2-252ENST00000523803 CC2D2AQ9P2K1 1620 aa16.64■□□□□ 0.25
PTK2-252ENST00000523803 EIF4G1Q04637 1599 aaKnown RBP16.63■□□□□ 0.25
PTK2-252ENST00000523803 CECR2Q9BXF3 1484 aa16.58■□□□□ 0.24
PTK2-252ENST00000523803 CHIC1Q5VXU3 224 aa16.43■□□□□ 0.22
PTK2-252ENST00000523803 NCAPD3P42695 1498 aa16.14■□□□□ 0.17
PTK2-252ENST00000523803 ATAD2BQ9ULI0 1458 aa16.1■□□□□ 0.17
PTK2-252ENST00000523803 SMARCA4P51532 1647 aa16.1■□□□□ 0.17
PTK2-252ENST00000523803 SMARCA2P51531 1590 aa16.02■□□□□ 0.16
PTK2-252ENST00000523803 BAZ1AQ9NRL2 1556 aaPredicted RBP16.01■□□□□ 0.15
PTK2-252ENST00000523803 HMGXB3Q12766 1538 aa15.99■□□□□ 0.15
PTK2-252ENST00000523803 MROH2BQ7Z745 1585 aa15.96■□□□□ 0.15
PTK2-252ENST00000523803 PEG3Q9GZU2 1588 aa15.94■□□□□ 0.14
PTK2-252ENST00000523803 BAZ1BQ9UIG0 1483 aaKnown RBP15.92■□□□□ 0.14
PTK2-252ENST00000523803 NESP48681 1621 aa15.89■□□□□ 0.13
PTK2-252ENST00000523803 ERCC6Q03468 1493 aa15.85■□□□□ 0.13
PTK2-252ENST00000523803 CUX2O14529 1486 aa15.79■□□□□ 0.12
PTK2-252ENST00000523803 WIZO95785 1651 aa15.76■□□□□ 0.11
PTK2-252ENST00000523803 DNAJC5Q9H3Z4 198 aa15.74■□□□□ 0.11
PTK2-252ENST00000523803 LAMC3Q9Y6N6 1575 aa15.72■□□□□ 0.11
PTK2-252ENST00000523803 RSF1Q96T23 1441 aaPredicted RBP15.67■□□□□ 0.1
PTK2-252ENST00000523803 THOC2Q8NI27 1593 aaKnown RBP15.66■□□□□ 0.1
PTK2-252ENST00000523803 CADPSQ9ULU8 1353 aa15.65■□□□□ 0.1
PTK2-252ENST00000523803 KIF21AQ7Z4S6 1674 aa15.65■□□□□ 0.1
PTK2-252ENST00000523803 PDS5BQ9NTI5 1447 aa15.63■□□□□ 0.09
PTK2-252ENST00000523803 TOP2AP11388 1531 aaKnown RBP15.54■□□□□ 0.08
PTK2-252ENST00000523803 CFTRP13569 1480 aa15.5■□□□□ 0.07
PTK2-252ENST00000523803 MRC2Q9UBG0 1479 aa15.5■□□□□ 0.07
PTK2-252ENST00000523803 FANCD2Q9BXW9 1451 aa15.46■□□□□ 0.07
PTK2-252ENST00000523803 WDR62O43379 1518 aa15.46■□□□□ 0.07
PTK2-252ENST00000523803 CEP164Q9UPV0 1460 aa15.45■□□□□ 0.06
PTK2-252ENST00000523803 CCDC88BA6NC98 1476 aa15.4■□□□□ 0.06
PTK2-252ENST00000523803 URB2Q14146 1524 aaKnown RBP15.36■□□□□ 0.05
PTK2-252ENST00000523803 PRDM2Q13029 1718 aa15.3■□□□□ 0.04
PTK2-252ENST00000523803 TOPBP1Q92547 1522 aa15.18■□□□□ 0.02
PTK2-252ENST00000523803 ZNF608Q9ULD9 1512 aaPredicted RBP15.17■□□□□ 0.02
PTK2-252ENST00000523803 IFT140Q96RY7 1462 aa15.14■□□□□ 0.01
PTK2-252ENST00000523803 OSCARQ8IYS5 282 aa15.13■□□□□ 0.01
PTK2-252ENST00000523803 ABCC8Q09428 1581 aa15.11■□□□□ 0.01
PTK2-252ENST00000523803 DNMBPQ6XZF7 1577 aa15.11■□□□□ 0.01
PTK2-252ENST00000523803 SENP3Q9H4L4 574 aaPredicted RBP15.08■□□□□ 0
PTK2-252ENST00000523803 TRIM41Q8WV44 630 aa15.07■□□□□ 0
PTK2-252ENST00000523803 TARBP1Q13395 1621 aaKnown RBP15.06■□□□□ 0
PTK2-252ENST00000523803 SUPT5HO00267 1087 aaKnown RBP15.05■□□□□ -0
PTK2-252ENST00000523803 POLA1P09884 1462 aaPredicted RBP15.05■□□□□ -0
PTK2-252ENST00000523803 EIF4G3O43432 1585 aaKnown RBP15.03■□□□□ -0
PTK2-252ENST00000523803 AQRO60306 1485 aaKnown RBP eCLIP15.03■□□□□ -03e-6■■■■□ 24.7
PTK2-252ENST00000523803 RAD54L2Q9Y4B4 1467 aa15.01□□□□□ -0.01
PTK2-252ENST00000523803 CUX1P39880 1505 aa14.98□□□□□ -0.01
PTK2-252ENST00000523803 SOGA1O94964 1423 aa14.97□□□□□ -0.01
PTK2-252ENST00000523803 TDRD9Q8NDG6 1382 aaKnown RBP14.96□□□□□ -0.02
PTK2-252ENST00000523803 FGD5Q6ZNL6 1462 aa14.95□□□□□ -0.02
PTK2-252ENST00000523803 RIMBP3CA6NJZ7 1639 aa14.92□□□□□ -0.02
PTK2-252ENST00000523803 RIMBP3BA6NNM3 1639 aa14.92□□□□□ -0.02
PTK2-252ENST00000523803 RIMBP3Q9UFD9 1639 aa14.92□□□□□ -0.02
PTK2-252ENST00000523803 CHD1O14646 1710 aa14.91□□□□□ -0.02
PTK2-252ENST00000523803 FBLN2P98095 1184 aa14.89□□□□□ -0.03
PTK2-252ENST00000523803 ARHGEF11O15085 1522 aa14.88□□□□□ -0.03
PTK2-252ENST00000523803 SNAPC4Q5SXM2 1469 aa14.85□□□□□ -0.03
PTK2-252ENST00000523803 WDR97A6NE52 1622 aa14.84□□□□□ -0.03
PTK2-252ENST00000523803 GRIN2BQ13224 1484 aa14.82□□□□□ -0.04
PTK2-252ENST00000523803 CYB5RLQ6IPT4 315 aa14.79□□□□□ -0.04
PTK2-252ENST00000523803 CHMP7Q8WUX9 453 aaPredicted RBP14.79□□□□□ -0.04
PTK2-252ENST00000523803 ABCA10Q8WWZ4 1543 aa14.79□□□□□ -0.04
PTK2-252ENST00000523803 MAGI1Q96QZ7 1491 aaPredicted RBP14.79□□□□□ -0.04
PTK2-252ENST00000523803 GAPVD1Q14C86 1478 aa14.78□□□□□ -0.04
PTK2-252ENST00000523803 ABCA5Q8WWZ7 1642 aa14.76□□□□□ -0.05
PTK2-252ENST00000523803 SYNJ2O15056 1496 aa14.76□□□□□ -0.05
PTK2-252ENST00000523803 ARAP1Q96P48 1450 aa14.76□□□□□ -0.05
PTK2-252ENST00000523803 PBRM1Q86U86 1689 aa14.75□□□□□ -0.05
PTK2-252ENST00000523803 PHF23Q9BUL5 403 aaPredicted RBP14.75□□□□□ -0.05
PTK2-252ENST00000523803 SYNJ1O43426 1573 aa14.75□□□□□ -0.05
PTK2-252ENST00000523803 CLASP1Q7Z460 1538 aa14.75□□□□□ -0.05
PTK2-252ENST00000523803 WRNQ14191 1432 aaPredicted RBP eCLIP14.75□□□□□ -0.05
PTK2-252ENST00000523803 TOP2BQ02880 1626 aa14.74□□□□□ -0.05
PTK2-252ENST00000523803 BIVM-ERCC5R4GMW8 1640 aa14.74□□□□□ -0.05
PTK2-252ENST00000523803 GRIN2AQ12879 1464 aa14.63□□□□□ -0.07
PTK2-252ENST00000523803 ADAMTS12P58397 1594 aa14.62□□□□□ -0.07
PTK2-252ENST00000523803 FHAD1B1AJZ9 1412 aa14.59□□□□□ -0.07
PTK2-252ENST00000523803 NUP160Q12769 1436 aa14.59□□□□□ -0.07
PTK2-252ENST00000523803 ERICH3Q5RHP9 1530 aa14.59□□□□□ -0.07
PTK2-252ENST00000523803 CEP170Q5SW79 1584 aa14.59□□□□□ -0.07
PTK2-252ENST00000523803 ERCC6L2Q5T890 1561 aa14.57□□□□□ -0.08
PTK2-252ENST00000523803 TRHP20396 242 aaPredicted RBP14.55□□□□□ -0.08
PTK2-252ENST00000523803 SHROOM2Q13796 1616 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms