RNA–Protein interactions for RNA: ENST00000520892.5

PTK2-225, Transcript of protein tyrosine kinase 2, humanhuman

TSL 4 BASIC

Gene PTK2, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2-225ENST00000520892 NISCHQ9Y2I1 1504 aa34.74■■■■□ 3.15
PTK2-225ENST00000520892 ABCC9O60706 1549 aa32.16■■■□□ 2.74
PTK2-225ENST00000520892 CCDC180Q9P1Z9 1646 aa31.48■■■□□ 2.63
PTK2-225ENST00000520892 DNAJC5BQ9UF47 199 aa30.85■■■□□ 2.53
PTK2-225ENST00000520892 RB1CC1Q8TDY2 1594 aa30.24■■■□□ 2.43
PTK2-225ENST00000520892 NACADO15069 1562 aa29.86■■■□□ 2.37
PTK2-225ENST00000520892 UNC13AQ9UPW8 1703 aa29.83■■■□□ 2.37
PTK2-225ENST00000520892 PABPN1Q86U42 306 aaKnown RBP eCLIP29.83■■■□□ 2.37
PTK2-225ENST00000520892 DCAF8L2P0C7V8 631 aa29.55■■■□□ 2.32
PTK2-225ENST00000520892 BICRAQ9NZM4 1560 aa29.54■■■□□ 2.32
PTK2-225ENST00000520892 MYO15BQ96JP2 1530 aa29.17■■■□□ 2.26
PTK2-225ENST00000520892 CC2D2AQ9P2K1 1620 aa29.05■■■□□ 2.24
PTK2-225ENST00000520892 CECR2Q9BXF3 1484 aa28.98■■■□□ 2.23
PTK2-225ENST00000520892 SHROOM4Q9ULL8 1493 aa28.81■■■□□ 2.2
PTK2-225ENST00000520892 EIF4G1Q04637 1599 aaKnown RBP28.78■■■□□ 2.2
PTK2-225ENST00000520892 SCRIBQ14160 1630 aa28.7■■■□□ 2.19
PTK2-225ENST00000520892 DNAJC5Q9H3Z4 198 aa28.67■■■□□ 2.18
PTK2-225ENST00000520892 ZCCHC6Q5VYS8 1495 aaKnown RBP28.65■■■□□ 2.18
PTK2-225ENST00000520892 DCAF1Q9Y4B6 1507 aa28.59■■■□□ 2.17
PTK2-225ENST00000520892 CUX2O14529 1486 aa27.89■■■□□ 2.05
PTK2-225ENST00000520892 ERCC6Q03468 1493 aa27.7■■■□□ 2.03
PTK2-225ENST00000520892 NCAPD3P42695 1498 aa27.57■■■□□ 2
PTK2-225ENST00000520892 NESP48681 1621 aa27.49■■□□□ 1.99
PTK2-225ENST00000520892 ATAD2BQ9ULI0 1458 aa27.44■■□□□ 1.98
PTK2-225ENST00000520892 THOC2Q8NI27 1593 aaKnown RBP27.34■■□□□ 1.97
PTK2-225ENST00000520892 HMGXB3Q12766 1538 aa27.31■■□□□ 1.96
PTK2-225ENST00000520892 SMARCA4P51532 1647 aa27.29■■□□□ 1.96
PTK2-225ENST00000520892 SMARCA2P51531 1590 aa27.26■■□□□ 1.96
PTK2-225ENST00000520892 KIF21AQ7Z4S6 1674 aa27.17■■□□□ 1.94
PTK2-225ENST00000520892 TRIM41Q8WV44 630 aa27.15■■□□□ 1.94
PTK2-225ENST00000520892 BAZ1BQ9UIG0 1483 aaKnown RBP27.09■■□□□ 1.93
PTK2-225ENST00000520892 LAMC3Q9Y6N6 1575 aa27.07■■□□□ 1.92
PTK2-225ENST00000520892 PEG3Q9GZU2 1588 aa26.98■■□□□ 1.91
PTK2-225ENST00000520892 BAZ1AQ9NRL2 1556 aaPredicted RBP26.96■■□□□ 1.91
PTK2-225ENST00000520892 PDS5BQ9NTI5 1447 aa26.86■■□□□ 1.89
PTK2-225ENST00000520892 MROH2BQ7Z745 1585 aa26.83■■□□□ 1.89
PTK2-225ENST00000520892 WDR62O43379 1518 aa26.74■■□□□ 1.87
PTK2-225ENST00000520892 MRC2Q9UBG0 1479 aa26.74■■□□□ 1.87
PTK2-225ENST00000520892 CADPSQ9ULU8 1353 aa26.69■■□□□ 1.86
PTK2-225ENST00000520892 WIZO95785 1651 aa26.53■■□□□ 1.84
PTK2-225ENST00000520892 CEP164Q9UPV0 1460 aa26.49■■□□□ 1.83
PTK2-225ENST00000520892 OSCARQ8IYS5 282 aa26.46■■□□□ 1.83
PTK2-225ENST00000520892 FANCD2Q9BXW9 1451 aa26.42■■□□□ 1.82
PTK2-225ENST00000520892 RIMBP3CA6NJZ7 1639 aa26.38■■□□□ 1.81
PTK2-225ENST00000520892 RIMBP3BA6NNM3 1639 aa26.38■■□□□ 1.81
PTK2-225ENST00000520892 RIMBP3Q9UFD9 1639 aa26.38■■□□□ 1.81
PTK2-225ENST00000520892 URB2Q14146 1524 aaKnown RBP26.32■■□□□ 1.8
PTK2-225ENST00000520892 CFTRP13569 1480 aa26.27■■□□□ 1.8
PTK2-225ENST00000520892 ARHGEF11O15085 1522 aa26.16■■□□□ 1.78
PTK2-225ENST00000520892 ZNF608Q9ULD9 1512 aaPredicted RBP26.12■■□□□ 1.77
PTK2-225ENST00000520892 PRDM2Q13029 1718 aa26.11■■□□□ 1.77
PTK2-225ENST00000520892 TOP2AP11388 1531 aaKnown RBP26.02■■□□□ 1.76
PTK2-225ENST00000520892 RSF1Q96T23 1441 aaPredicted RBP25.97■■□□□ 1.75
PTK2-225ENST00000520892 CYB5RLQ6IPT4 315 aa25.96■■□□□ 1.75
PTK2-225ENST00000520892 IFT140Q96RY7 1462 aa25.96■■□□□ 1.75
PTK2-225ENST00000520892 CHD1O14646 1710 aa25.95■■□□□ 1.74
PTK2-225ENST00000520892 EIF4G3O43432 1585 aaKnown RBP25.93■■□□□ 1.74
PTK2-225ENST00000520892 ARAP1Q96P48 1450 aa25.89■■□□□ 1.73
PTK2-225ENST00000520892 TOPBP1Q92547 1522 aa25.88■■□□□ 1.73
PTK2-225ENST00000520892 TRHP20396 242 aaPredicted RBP25.84■■□□□ 1.73
PTK2-225ENST00000520892 TARBP1Q13395 1621 aaKnown RBP25.77■■□□□ 1.72
PTK2-225ENST00000520892 CCDC88BA6NC98 1476 aa25.76■■□□□ 1.71
PTK2-225ENST00000520892 AQRO60306 1485 aaKnown RBP eCLIP25.76■■□□□ 1.713e-6■■■■□ 24.7
PTK2-225ENST00000520892 DNMBPQ6XZF7 1577 aa25.71■■□□□ 1.71
PTK2-225ENST00000520892 ABCC8Q09428 1581 aa25.64■■□□□ 1.69
PTK2-225ENST00000520892 FBLN2P98095 1184 aa25.63■■□□□ 1.69
PTK2-225ENST00000520892 POLA1P09884 1462 aaPredicted RBP25.57■■□□□ 1.68
PTK2-225ENST00000520892 CLASP1Q7Z460 1538 aa25.54■■□□□ 1.68
PTK2-225ENST00000520892 RAD54L2Q9Y4B4 1467 aa25.53■■□□□ 1.68
PTK2-225ENST00000520892 AEBP2Q6ZN18 517 aaPredicted RBP25.52■■□□□ 1.68
PTK2-225ENST00000520892 TDRD9Q8NDG6 1382 aaKnown RBP25.47■■□□□ 1.67
PTK2-225ENST00000520892 SNAPC4Q5SXM2 1469 aa25.46■■□□□ 1.67
PTK2-225ENST00000520892 SOGA1O94964 1423 aa25.38■■□□□ 1.65
PTK2-225ENST00000520892 SYNJ1O43426 1573 aa25.38■■□□□ 1.65
PTK2-225ENST00000520892 FGD5Q6ZNL6 1462 aa25.31■■□□□ 1.64
PTK2-225ENST00000520892 WDR97A6NE52 1622 aa25.3■■□□□ 1.64
PTK2-225ENST00000520892 CHMP7Q8WUX9 453 aaPredicted RBP25.3■■□□□ 1.64
PTK2-225ENST00000520892 MAGI1Q96QZ7 1491 aaPredicted RBP25.29■■□□□ 1.64
PTK2-225ENST00000520892 GAPVD1Q14C86 1478 aa25.26■■□□□ 1.63
PTK2-225ENST00000520892 PBRM1Q86U86 1689 aa25.25■■□□□ 1.63
PTK2-225ENST00000520892 CUX1P39880 1505 aa25.23■■□□□ 1.63
PTK2-225ENST00000520892 SYNJ2O15056 1496 aa25.23■■□□□ 1.63
PTK2-225ENST00000520892 GRIN2BQ13224 1484 aa25.23■■□□□ 1.63
PTK2-225ENST00000520892 ERCC6L2Q5T890 1561 aa25.19■■□□□ 1.62
PTK2-225ENST00000520892 KIF13AQ9H1H9 1805 aa25.08■■□□□ 1.61
PTK2-225ENST00000520892 ABCA5Q8WWZ7 1642 aa25.06■■□□□ 1.6
PTK2-225ENST00000520892 CEP170Q5SW79 1584 aa24.99■■□□□ 1.59
PTK2-225ENST00000520892 ABCA10Q8WWZ4 1543 aa24.96■■□□□ 1.59
PTK2-225ENST00000520892 GRIN2AQ12879 1464 aa24.94■■□□□ 1.58
PTK2-225ENST00000520892 SHROOM2Q13796 1616 aa24.92■■□□□ 1.58
PTK2-225ENST00000520892 ADAMTS12P58397 1594 aa24.89■■□□□ 1.58
PTK2-225ENST00000520892 NUP160Q12769 1436 aa24.88■■□□□ 1.57
PTK2-225ENST00000520892 FHAD1B1AJZ9 1412 aa24.69■■□□□ 1.54
PTK2-225ENST00000520892 PRG4Q92954 1404 aaPredicted RBP24.69■■□□□ 1.54
PTK2-225ENST00000520892 KDM4FA0A1W2PPD8 638 aa24.68■■□□□ 1.54
PTK2-225ENST00000520892 ABCC10Q5T3U5 1492 aa24.67■■□□□ 1.54
PTK2-225ENST00000520892 TSPOAP1O95153 1857 aa24.66■■□□□ 1.54
PTK2-225ENST00000520892 WRNQ14191 1432 aaPredicted RBP eCLIP24.66■■□□□ 1.54
PTK2-225ENST00000520892 DIP2BQ9P265 1576 aa24.66■■□□□ 1.54
PTK2-225ENST00000520892 BIVM-ERCC5R4GMW8 1640 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms