RNA–Protein interactions for RNA: ENST00000375592.7

FBXO42-201, Transcript of F-box protein 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FBXO42, Length 6,202 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO42-201ENST00000375592 NISCHQ9Y2I1 1504 aa25.69■■□□□ 1.7
FBXO42-201ENST00000375592 DCAF8L2P0C7V8 631 aa25.23■■□□□ 1.63
FBXO42-201ENST00000375592 SUPT5HO00267 1087 aaKnown RBP24.43■■□□□ 1.5
FBXO42-201ENST00000375592 SHROOM4Q9ULL8 1493 aa24.15■■□□□ 1.46
FBXO42-201ENST00000375592 EHMT2Q96KQ7 1210 aa23.21■■□□□ 1.31
FBXO42-201ENST00000375592 PCGF6Q9BYE7 350 aa22.93■■□□□ 1.26
FBXO42-201ENST00000375592 FAM9AQ8IZU1 332 aaPredicted RBP22.9■■□□□ 1.26
FBXO42-201ENST00000375592 APLP2Q06481 763 aa22.82■■□□□ 1.24
FBXO42-201ENST00000375592 TRIM41Q8WV44 630 aa22.72■■□□□ 1.23
FBXO42-201ENST00000375592 ZEB1P37275 1124 aaPredicted RBP22.59■■□□□ 1.21
FBXO42-201ENST00000375592 PELP1Q8IZL8 1130 aaKnown RBP22.55■■□□□ 1.2
FBXO42-201ENST00000375592 TTBK1Q5TCY1 1321 aaPredicted RBP22.48■■□□□ 1.19
FBXO42-201ENST00000375592 CCER1Q8TC90 406 aaPredicted RBP22.32■■□□□ 1.16
FBXO42-201ENST00000375592 UBTFP17480 764 aaKnown RBP22.23■■□□□ 1.15
FBXO42-201ENST00000375592 CHIC1Q5VXU3 224 aa22.23■■□□□ 1.15
FBXO42-201ENST00000375592 CENPBP07199 599 aaPredicted RBP22.21■■□□□ 1.15
FBXO42-201ENST00000375592 RANGAP1P46060 587 aaPredicted RBP22.19■■□□□ 1.14
FBXO42-201ENST00000375592 TRIM26Q12899 539 aaPredicted RBP22.17■■□□□ 1.14
FBXO42-201ENST00000375592 HRCP23327 699 aa22.1■■□□□ 1.13
FBXO42-201ENST00000375592 LOC105371045A0A1W2PR82 267 aa21.99■■□□□ 1.11
FBXO42-201ENST00000375592 PPARGC1BQ86YN6 1023 aaKnown RBP21.93■■□□□ 1.1
FBXO42-201ENST00000375592 ATP1B4Q9UN42 357 aaPredicted RBP21.89■■□□□ 1.1
FBXO42-201ENST00000375592 YTHDC1Q96MU7 727 aaKnown RBP21.68■■□□□ 1.06
FBXO42-201ENST00000375592 ERICH6Q7L0X2 663 aa21.52■■□□□ 1.04
FBXO42-201ENST00000375592 NEFLP07196 543 aa21.51■■□□□ 1.03
FBXO42-201ENST00000375592 ABCC9O60706 1549 aa21.49■■□□□ 1.03
FBXO42-201ENST00000375592 HNRNPUL2Q1KMD3 747 aaKnown RBP21.46■■□□□ 1.03
FBXO42-201ENST00000375592 ZCCHC6Q5VYS8 1495 aaKnown RBP21.4■■□□□ 1.02
FBXO42-201ENST00000375592 ITGAEP38570 1179 aa21.39■■□□□ 1.01
FBXO42-201ENST00000375592 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.37■■□□□ 1.01
FBXO42-201ENST00000375592 MYT1Q01538 1121 aa21.3■■□□□ 1
FBXO42-201ENST00000375592 PABPN1Q86U42 306 aaKnown RBP eCLIP21.25■□□□□ 0.99
FBXO42-201ENST00000375592 DIEXFQ68CQ4 756 aaKnown RBP21.23■□□□□ 0.99
FBXO42-201ENST00000375592 CCDC180Q9P1Z9 1646 aa21.13■□□□□ 0.97
FBXO42-201ENST00000375592 DCAF1Q9Y4B6 1507 aa21.01■□□□□ 0.95
FBXO42-201ENST00000375592 SCRIBQ14160 1630 aa21■□□□□ 0.95
FBXO42-201ENST00000375592 CSRNP3Q8WYN3 585 aa20.99■□□□□ 0.95
FBXO42-201ENST00000375592 FAM50AQ14320 339 aaKnown RBP20.97■□□□□ 0.95
FBXO42-201ENST00000375592 POLR3GLQ9BT43 218 aa20.93■□□□□ 0.94
FBXO42-201ENST00000375592 ZNF316A6NFI3 1004 aaPredicted RBP20.85■□□□□ 0.93
FBXO42-201ENST00000375592 NEUROD1Q13562 356 aa20.78■□□□□ 0.92
FBXO42-201ENST00000375592 MYT1LQ9UL68 1186 aa20.78■□□□□ 0.92
FBXO42-201ENST00000375592 GTF3C3Q9Y5Q9 886 aa20.76■□□□□ 0.91
FBXO42-201ENST00000375592 TRIM52Q96A61 297 aa20.74■□□□□ 0.91
FBXO42-201ENST00000375592 CNGB1Q14028 1251 aaPredicted RBP20.74■□□□□ 0.91
FBXO42-201ENST00000375592 MYO15BQ96JP2 1530 aa20.65■□□□□ 0.9
FBXO42-201ENST00000375592 ACIN1Q9UKV3 1341 aaKnown RBP20.64■□□□□ 0.9
FBXO42-201ENST00000375592 ANP32CO43423 234 aa20.63■□□□□ 0.89
FBXO42-201ENST00000375592 DAXXQ9UER7 740 aaPredicted RBP20.63■□□□□ 0.89
FBXO42-201ENST00000375592 RSF1Q96T23 1441 aaPredicted RBP20.6■□□□□ 0.89
FBXO42-201ENST00000375592 P3H3Q8IVL6 736 aa20.55■□□□□ 0.88
FBXO42-201ENST00000375592 BCANQ96GW7 911 aa20.47■□□□□ 0.87
FBXO42-201ENST00000375592 RB1CC1Q8TDY2 1594 aa20.43■□□□□ 0.86
FBXO42-201ENST00000375592 ZNF326Q5BKZ1 582 aaKnown RBP20.41■□□□□ 0.86
FBXO42-201ENST00000375592 EEA1Q15075 1411 aa20.39■□□□□ 0.86
FBXO42-201ENST00000375592 NACADO15069 1562 aa20.39■□□□□ 0.85
FBXO42-201ENST00000375592 FBLN2P98095 1184 aa20.37■□□□□ 0.85
FBXO42-201ENST00000375592 SLC4A1APQ9BWU0 796 aaKnown RBP20.37■□□□□ 0.85
FBXO42-201ENST00000375592 CLIP1P30622 1438 aa20.34■□□□□ 0.85
FBXO42-201ENST00000375592 CLSPNQ9HAW4 1339 aa20.33■□□□□ 0.85
FBXO42-201ENST00000375592 RTL5Q5HYW3 569 aaPredicted RBP20.32■□□□□ 0.84
FBXO42-201ENST00000375592 CDK11AQ9UQ88 783 aaPredicted RBP20.32■□□□□ 0.84
FBXO42-201ENST00000375592 ARID3CA6NKF2 412 aa20.29■□□□□ 0.84
FBXO42-201ENST00000375592 CEP162Q5TB80 1403 aa20.29■□□□□ 0.84
FBXO42-201ENST00000375592 GOLGA3Q08378 1498 aa20.29■□□□□ 0.84
FBXO42-201ENST00000375592 TONSLQ96HA7 1378 aa20.28■□□□□ 0.84
FBXO42-201ENST00000375592 WRNQ14191 1432 aaPredicted RBP eCLIP20.21■□□□□ 0.83
FBXO42-201ENST00000375592 TNIKQ9UKE5 1360 aa20.2■□□□□ 0.82
FBXO42-201ENST00000375592 ZNF777Q9ULD5 760 aaPredicted RBP20.19■□□□□ 0.82
FBXO42-201ENST00000375592 DDX10Q13206 875 aaKnown RBP20.15■□□□□ 0.82
FBXO42-201ENST00000375592 BAZ1AQ9NRL2 1556 aaPredicted RBP20.15■□□□□ 0.82
FBXO42-201ENST00000375592 CEP164Q9UPV0 1460 aa20.1■□□□□ 0.81
FBXO42-201ENST00000375592 CECR2Q9BXF3 1484 aa20.09■□□□□ 0.81
FBXO42-201ENST00000375592 BAZ1BQ9UIG0 1483 aaKnown RBP20.09■□□□□ 0.81
FBXO42-201ENST00000375592 FKBP8Q14318 412 aa20.08■□□□□ 0.8
FBXO42-201ENST00000375592 MIER1Q8N108 512 aa20.08■□□□□ 0.8
FBXO42-201ENST00000375592 SCAF1Q9H7N4 1312 aaKnown RBP20.07■□□□□ 0.8
FBXO42-201ENST00000375592 MTUS2Q5JR59 1369 aa20.07■□□□□ 0.8
FBXO42-201ENST00000375592 HNRNPUQ00839 825 aaKnown RBP eCLIP20.03■□□□□ 0.8
FBXO42-201ENST00000375592 CHIC2Q9UKJ5 165 aa20.02■□□□□ 0.79
FBXO42-201ENST00000375592 KIF27Q86VH2 1401 aa20■□□□□ 0.79
FBXO42-201ENST00000375592 CANXP27824 592 aaKnown RBP19.94■□□□□ 0.78
FBXO42-201ENST00000375592 ANP32AP39687 249 aaKnown RBP19.93■□□□□ 0.78
FBXO42-201ENST00000375592 FAM9BQ8IZU0 186 aa19.92■□□□□ 0.78
FBXO42-201ENST00000375592 MROH2BQ7Z745 1585 aa19.89■□□□□ 0.77
FBXO42-201ENST00000375592 SOGA1O94964 1423 aa19.87■□□□□ 0.77
FBXO42-201ENST00000375592 TSPY4P0CV99 314 aa19.84■□□□□ 0.77
FBXO42-201ENST00000375592 TSPY10P0CW01 314 aa19.84■□□□□ 0.77
FBXO42-201ENST00000375592 ZBTB47Q9UFB7 747 aaPredicted RBP19.83■□□□□ 0.77
FBXO42-201ENST00000375592 NEFMP07197 916 aa19.82■□□□□ 0.76
FBXO42-201ENST00000375592 EIF4G2P78344 907 aaKnown RBP eCLIP19.82■□□□□ 0.76
FBXO42-201ENST00000375592 MRS2Q9HD23 443 aa19.82■□□□□ 0.76
FBXO42-201ENST00000375592 RRP7BPQ9NSQ0 103 aa19.81■□□□□ 0.76
FBXO42-201ENST00000375592 HIRIP3Q9BW71 556 aaPredicted RBP19.81■□□□□ 0.76
FBXO42-201ENST00000375592 TMC1Q8TDI8 760 aa19.8■□□□□ 0.76
FBXO42-201ENST00000375592 CCDC88BA6NC98 1476 aa19.8■□□□□ 0.76
FBXO42-201ENST00000375592 CHMP7Q8WUX9 453 aaPredicted RBP19.78■□□□□ 0.76
FBXO42-201ENST00000375592 NPM2Q86SE8 214 aaKnown RBP19.75■□□□□ 0.75
FBXO42-201ENST00000375592 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.73■□□□□ 0.758e-9■■■■□ 22.3
FBXO42-201ENST00000375592 VPS8Q8N3P4 1428 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms