RNA–Protein interactions for RNA: ENST00000523797.1

PTK2-251, Transcript of protein tyrosine kinase 2, humanhuman

TSL 3

Gene PTK2, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2-251ENST00000523797 NISCHQ9Y2I1 1504 aa55.97■■■■■ 6.55
PTK2-251ENST00000523797 ABCC9O60706 1549 aa50.36■■■■■ 5.65
PTK2-251ENST00000523797 CCDC180Q9P1Z9 1646 aa50.05■■■■■ 5.6
PTK2-251ENST00000523797 RB1CC1Q8TDY2 1594 aa47.75■■■■■ 5.23
PTK2-251ENST00000523797 DCAF8L2P0C7V8 631 aa47.51■■■■■ 5.2
PTK2-251ENST00000523797 NACADO15069 1562 aa47.41■■■■■ 5.18
PTK2-251ENST00000523797 DNAJC5BQ9UF47 199 aa47.4■■■■■ 5.18
PTK2-251ENST00000523797 PABPN1Q86U42 306 aaKnown RBP eCLIP47.01■■■■■ 5.12
PTK2-251ENST00000523797 MYO15BQ96JP2 1530 aa46.69■■■■■ 5.07
PTK2-251ENST00000523797 UNC13AQ9UPW8 1703 aa46.64■■■■■ 5.06
PTK2-251ENST00000523797 BICRAQ9NZM4 1560 aa46.43■■■■■ 5.02
PTK2-251ENST00000523797 ZCCHC6Q5VYS8 1495 aaKnown RBP46.34■■■■■ 5.01
PTK2-251ENST00000523797 DCAF1Q9Y4B6 1507 aa46.12■■■■■ 4.97
PTK2-251ENST00000523797 SCRIBQ14160 1630 aa45.79■■■■■ 4.92
PTK2-251ENST00000523797 SHROOM4Q9ULL8 1493 aa45.61■■■■■ 4.89
PTK2-251ENST00000523797 CC2D2AQ9P2K1 1620 aa45.39■■■■■ 4.86
PTK2-251ENST00000523797 CECR2Q9BXF3 1484 aa45.31■■■■■ 4.84
PTK2-251ENST00000523797 EIF4G1Q04637 1599 aaKnown RBP45.28■■■■■ 4.84
PTK2-251ENST00000523797 NCAPD3P42695 1498 aa43.85■■■■■ 4.61
PTK2-251ENST00000523797 ATAD2BQ9ULI0 1458 aa43.74■■■■■ 4.59
PTK2-251ENST00000523797 SMARCA4P51532 1647 aa43.62■■■■■ 4.57
PTK2-251ENST00000523797 SMARCA2P51531 1590 aa43.51■■■■■ 4.56
PTK2-251ENST00000523797 DNAJC5Q9H3Z4 198 aa43.43■■■■■ 4.54
PTK2-251ENST00000523797 HMGXB3Q12766 1538 aa43.43■■■■■ 4.54
PTK2-251ENST00000523797 ERCC6Q03468 1493 aa43.41■■■■■ 4.54
PTK2-251ENST00000523797 BAZ1AQ9NRL2 1556 aaPredicted RBP43.38■■■■■ 4.54
PTK2-251ENST00000523797 BAZ1BQ9UIG0 1483 aaKnown RBP43.29■■■■■ 4.52
PTK2-251ENST00000523797 NESP48681 1621 aa43.26■■■■■ 4.52
PTK2-251ENST00000523797 CUX2O14529 1486 aa43.26■■■■■ 4.52
PTK2-251ENST00000523797 MROH2BQ7Z745 1585 aa43.19■■■■■ 4.5
PTK2-251ENST00000523797 PEG3Q9GZU2 1588 aa43.15■■■■■ 4.5
PTK2-251ENST00000523797 LAMC3Q9Y6N6 1575 aa42.78■■■■■ 4.44
PTK2-251ENST00000523797 THOC2Q8NI27 1593 aaKnown RBP42.68■■■■■ 4.42
PTK2-251ENST00000523797 WIZO95785 1651 aa42.63■■■■■ 4.42
PTK2-251ENST00000523797 PDS5BQ9NTI5 1447 aa42.62■■■■■ 4.41
PTK2-251ENST00000523797 CADPSQ9ULU8 1353 aa42.56■■■■■ 4.4
PTK2-251ENST00000523797 KIF21AQ7Z4S6 1674 aa42.56■■■■■ 4.4
PTK2-251ENST00000523797 RSF1Q96T23 1441 aaPredicted RBP42.29■■■■■ 4.36
PTK2-251ENST00000523797 MRC2Q9UBG0 1479 aa42.23■■■■■ 4.35
PTK2-251ENST00000523797 WDR62O43379 1518 aa42.1■■■■■ 4.33
PTK2-251ENST00000523797 FANCD2Q9BXW9 1451 aa42.06■■■■■ 4.32
PTK2-251ENST00000523797 CEP164Q9UPV0 1460 aa42.06■■■■■ 4.32
PTK2-251ENST00000523797 TOP2AP11388 1531 aaKnown RBP42.03■■■■■ 4.32
PTK2-251ENST00000523797 CFTRP13569 1480 aa42.03■■■■■ 4.32
PTK2-251ENST00000523797 URB2Q14146 1524 aaKnown RBP41.73■■■■■ 4.27
PTK2-251ENST00000523797 CCDC88BA6NC98 1476 aa41.66■■■■■ 4.26
PTK2-251ENST00000523797 TRIM41Q8WV44 630 aa41.61■■■■■ 4.25
PTK2-251ENST00000523797 OSCARQ8IYS5 282 aa41.44■■■■■ 4.22
PTK2-251ENST00000523797 PRDM2Q13029 1718 aa41.39■■■■■ 4.22
PTK2-251ENST00000523797 ZNF608Q9ULD9 1512 aaPredicted RBP41.26■■■■■ 4.2
PTK2-251ENST00000523797 TOPBP1Q92547 1522 aa41.24■■■■■ 4.19
PTK2-251ENST00000523797 IFT140Q96RY7 1462 aa41.22■■■■■ 4.19
PTK2-251ENST00000523797 ABCC8Q09428 1581 aa41.08■■■■■ 4.17
PTK2-251ENST00000523797 DNMBPQ6XZF7 1577 aa41.03■■■■■ 4.16
PTK2-251ENST00000523797 AQRO60306 1485 aaKnown RBP eCLIP40.92■■■■■ 4.143e-6■■■■□ 24.7
PTK2-251ENST00000523797 EIF4G3O43432 1585 aaKnown RBP40.91■■■■■ 4.14
PTK2-251ENST00000523797 TARBP1Q13395 1621 aaKnown RBP40.85■■■■■ 4.13
PTK2-251ENST00000523797 POLA1P09884 1462 aaPredicted RBP40.83■■■■■ 4.13
PTK2-251ENST00000523797 RIMBP3CA6NJZ7 1639 aa40.79■■■■■ 4.12
PTK2-251ENST00000523797 RIMBP3BA6NNM3 1639 aa40.79■■■■■ 4.12
PTK2-251ENST00000523797 RIMBP3Q9UFD9 1639 aa40.79■■■■■ 4.12
PTK2-251ENST00000523797 RAD54L2Q9Y4B4 1467 aa40.77■■■■■ 4.12
PTK2-251ENST00000523797 FBLN2P98095 1184 aa40.72■■■■■ 4.11
PTK2-251ENST00000523797 SOGA1O94964 1423 aa40.7■■■■■ 4.11
PTK2-251ENST00000523797 ARHGEF11O15085 1522 aa40.68■■■■■ 4.1
PTK2-251ENST00000523797 TDRD9Q8NDG6 1382 aaKnown RBP40.68■■■■■ 4.1
PTK2-251ENST00000523797 CHD1O14646 1710 aa40.59■■■■■ 4.09
PTK2-251ENST00000523797 FGD5Q6ZNL6 1462 aa40.58■■■■■ 4.09
PTK2-251ENST00000523797 SUPT5HO00267 1087 aaKnown RBP40.57■■■■■ 4.09
PTK2-251ENST00000523797 CYB5RLQ6IPT4 315 aa40.55■■■■■ 4.08
PTK2-251ENST00000523797 CUX1P39880 1505 aa40.55■■■■■ 4.08
PTK2-251ENST00000523797 SNAPC4Q5SXM2 1469 aa40.42■■■■■ 4.06
PTK2-251ENST00000523797 CHMP7Q8WUX9 453 aaPredicted RBP40.35■■■■■ 4.05
PTK2-251ENST00000523797 ARAP1Q96P48 1450 aa40.31■■■■■ 4.04
PTK2-251ENST00000523797 WDR97A6NE52 1622 aa40.28■■■■■ 4.04
PTK2-251ENST00000523797 GRIN2BQ13224 1484 aa40.27■■■■■ 4.04
PTK2-251ENST00000523797 MAGI1Q96QZ7 1491 aaPredicted RBP40.23■■■■■ 4.03
PTK2-251ENST00000523797 GAPVD1Q14C86 1478 aa40.16■■■■■ 4.02
PTK2-251ENST00000523797 CLASP1Q7Z460 1538 aa40.15■■■■■ 4.02
PTK2-251ENST00000523797 SYNJ2O15056 1496 aa40.13■■■■■ 4.02
PTK2-251ENST00000523797 TRHP20396 242 aaPredicted RBP40.1■■■■■ 4.01
PTK2-251ENST00000523797 SYNJ1O43426 1573 aa40.1■■■■■ 4.01
PTK2-251ENST00000523797 ABCA10Q8WWZ4 1543 aa40.07■■■■■ 4.01
PTK2-251ENST00000523797 PBRM1Q86U86 1689 aa40.02■■■■■ 4
PTK2-251ENST00000523797 ABCA5Q8WWZ7 1642 aa39.98■■■■□ 3.99
PTK2-251ENST00000523797 WRNQ14191 1432 aaPredicted RBP eCLIP39.95■■■■□ 3.99
PTK2-251ENST00000523797 TOP2BQ02880 1626 aa39.82■■■■□ 3.96
PTK2-251ENST00000523797 BIVM-ERCC5R4GMW8 1640 aa39.78■■■■□ 3.96
PTK2-251ENST00000523797 GRIN2AQ12879 1464 aa39.76■■■■□ 3.96
PTK2-251ENST00000523797 ADAMTS12P58397 1594 aa39.68■■■■□ 3.94
PTK2-251ENST00000523797 ERCC6L2Q5T890 1561 aa39.64■■■■□ 3.94
PTK2-251ENST00000523797 FHAD1B1AJZ9 1412 aa39.64■■■■□ 3.94
PTK2-251ENST00000523797 NUP160Q12769 1436 aa39.63■■■■□ 3.93
PTK2-251ENST00000523797 CEP170Q5SW79 1584 aa39.63■■■■□ 3.93
PTK2-251ENST00000523797 ERICH3Q5RHP9 1530 aa39.54■■■■□ 3.92
PTK2-251ENST00000523797 SHROOM2Q13796 1616 aa39.38■■■■□ 3.89
PTK2-251ENST00000523797 JPH4Q96JJ6 628 aa39.34■■■■□ 3.89
PTK2-251ENST00000523797 PRG4Q92954 1404 aaPredicted RBP39.31■■■■□ 3.88
PTK2-251ENST00000523797 IGF1RP08069 1367 aa39.18■■■■□ 3.86
PTK2-251ENST00000523797 RUSC2Q8N2Y8 1516 aa39.12■■■■□ 3.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms