RNA–Protein interactions for RNA: ENST00000629650.2

PPM1D-204, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1D, humanhuman

TSL 5 BASIC

Gene PPM1D, Length 1,525 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1D-204ENST00000629650 NISCHQ9Y2I1 1504 aa45.9■■■■■ 4.94
PPM1D-204ENST00000629650 CCDC180Q9P1Z9 1646 aa40.38■■■■■ 4.05
PPM1D-204ENST00000629650 ABCC9O60706 1549 aa39.68■■■■□ 3.94
PPM1D-204ENST00000629650 ZCCHC6Q5VYS8 1495 aaKnown RBP38.45■■■■□ 3.75
PPM1D-204ENST00000629650 DCAF8L2P0C7V8 631 aa38.01■■■■□ 3.67
PPM1D-204ENST00000629650 DCAF1Q9Y4B6 1507 aa37.98■■■■□ 3.67
PPM1D-204ENST00000629650 RB1CC1Q8TDY2 1594 aa37.96■■■■□ 3.67
PPM1D-204ENST00000629650 NACADO15069 1562 aa37.85■■■■□ 3.65
PPM1D-204ENST00000629650 MYO15BQ96JP2 1530 aa37.75■■■■□ 3.63
PPM1D-204ENST00000629650 UNC13AQ9UPW8 1703 aa37.18■■■■□ 3.54
PPM1D-204ENST00000629650 PABPN1Q86U42 306 aaKnown RBP eCLIP37.1■■■■□ 3.53
PPM1D-204ENST00000629650 SHROOM4Q9ULL8 1493 aa36.97■■■■□ 3.51
PPM1D-204ENST00000629650 SCRIBQ14160 1630 aa36.97■■■■□ 3.51
PPM1D-204ENST00000629650 BICRAQ9NZM4 1560 aa36.87■■■■□ 3.49
PPM1D-204ENST00000629650 DNAJC5BQ9UF47 199 aa36.72■■■■□ 3.47
PPM1D-204ENST00000629650 EIF4G1Q04637 1599 aaKnown RBP35.9■■■■□ 3.34
PPM1D-204ENST00000629650 CC2D2AQ9P2K1 1620 aa35.84■■■■□ 3.33
PPM1D-204ENST00000629650 CECR2Q9BXF3 1484 aa35.67■■■■□ 3.3
PPM1D-204ENST00000629650 BAZ1AQ9NRL2 1556 aaPredicted RBP35.51■■■■□ 3.28
PPM1D-204ENST00000629650 SMARCA4P51532 1647 aa35.43■■■■□ 3.26
PPM1D-204ENST00000629650 MROH2BQ7Z745 1585 aa35.42■■■■□ 3.26
PPM1D-204ENST00000629650 RSF1Q96T23 1441 aaPredicted RBP35.36■■■■□ 3.25
PPM1D-204ENST00000629650 SUPT5HO00267 1087 aaKnown RBP35.3■■■■□ 3.24
PPM1D-204ENST00000629650 WIZO95785 1651 aa35.13■■■■□ 3.21
PPM1D-204ENST00000629650 PEG3Q9GZU2 1588 aa35.03■■■■□ 3.2
PPM1D-204ENST00000629650 SMARCA2P51531 1590 aa34.96■■■■□ 3.19
PPM1D-204ENST00000629650 ATAD2BQ9ULI0 1458 aa34.96■■■■□ 3.19
PPM1D-204ENST00000629650 NCAPD3P42695 1498 aa34.94■■■■□ 3.18
PPM1D-204ENST00000629650 TOP2AP11388 1531 aaKnown RBP34.76■■■■□ 3.16
PPM1D-204ENST00000629650 BAZ1BQ9UIG0 1483 aaKnown RBP34.73■■■■□ 3.15
PPM1D-204ENST00000629650 HMGXB3Q12766 1538 aa34.71■■■■□ 3.15
PPM1D-204ENST00000629650 CCDC88BA6NC98 1476 aa34.35■■■■□ 3.09
PPM1D-204ENST00000629650 NESP48681 1621 aa34.28■■■■□ 3.08
PPM1D-204ENST00000629650 ERCC6Q03468 1493 aa34.18■■■■□ 3.06
PPM1D-204ENST00000629650 LAMC3Q9Y6N6 1575 aa34.05■■■■□ 3.04
PPM1D-204ENST00000629650 CADPSQ9ULU8 1353 aa33.94■■■■□ 3.02
PPM1D-204ENST00000629650 PDS5BQ9NTI5 1447 aa33.85■■■■□ 3.01
PPM1D-204ENST00000629650 CUX2O14529 1486 aa33.84■■■■□ 3.01
PPM1D-204ENST00000629650 KIF21AQ7Z4S6 1674 aa33.83■■■■□ 3.01
PPM1D-204ENST00000629650 CFTRP13569 1480 aa33.82■■■■□ 3
PPM1D-204ENST00000629650 PRDM2Q13029 1718 aa33.73■■■□□ 2.99
PPM1D-204ENST00000629650 THOC2Q8NI27 1593 aaKnown RBP33.73■■■□□ 2.99
PPM1D-204ENST00000629650 FANCD2Q9BXW9 1451 aa33.56■■■□□ 2.96
PPM1D-204ENST00000629650 MRC2Q9UBG0 1479 aa33.52■■■□□ 2.96
PPM1D-204ENST00000629650 CEP164Q9UPV0 1460 aa33.52■■■□□ 2.96
PPM1D-204ENST00000629650 CHIC1Q5VXU3 224 aa33.5■■■□□ 2.95
PPM1D-204ENST00000629650 ABCC8Q09428 1581 aa33.47■■■□□ 2.95
PPM1D-204ENST00000629650 WDR62O43379 1518 aa33.39■■■□□ 2.94
PPM1D-204ENST00000629650 WRNQ14191 1432 aaPredicted RBP eCLIP33.33■■■□□ 2.93
PPM1D-204ENST00000629650 TRIM41Q8WV44 630 aa33.26■■■□□ 2.91
PPM1D-204ENST00000629650 URB2Q14146 1524 aaKnown RBP33.25■■■□□ 2.91
PPM1D-204ENST00000629650 SYNJ1O43426 1573 aa33.22■■■□□ 2.91
PPM1D-204ENST00000629650 DNAJC5Q9H3Z4 198 aa33.19■■■□□ 2.9
PPM1D-204ENST00000629650 CUX1P39880 1505 aa33.16■■■□□ 2.9
PPM1D-204ENST00000629650 TOP2BQ02880 1626 aa33.15■■■□□ 2.9
PPM1D-204ENST00000629650 BIVM-ERCC5R4GMW8 1640 aa33.15■■■□□ 2.9
PPM1D-204ENST00000629650 DNMBPQ6XZF7 1577 aa33.08■■■□□ 2.89
PPM1D-204ENST00000629650 TOPBP1Q92547 1522 aa33.02■■■□□ 2.88
PPM1D-204ENST00000629650 FGD5Q6ZNL6 1462 aa32.9■■■□□ 2.86
PPM1D-204ENST00000629650 IFT140Q96RY7 1462 aa32.82■■■□□ 2.84
PPM1D-204ENST00000629650 POLA1P09884 1462 aaPredicted RBP32.81■■■□□ 2.84
PPM1D-204ENST00000629650 ZNF608Q9ULD9 1512 aaPredicted RBP32.76■■■□□ 2.84
PPM1D-204ENST00000629650 SOGA1O94964 1423 aa32.69■■■□□ 2.82
PPM1D-204ENST00000629650 RAD54L2Q9Y4B4 1467 aa32.68■■■□□ 2.82
PPM1D-204ENST00000629650 TARBP1Q13395 1621 aaKnown RBP32.65■■■□□ 2.82
PPM1D-204ENST00000629650 RUSC2Q8N2Y8 1516 aa32.6■■■□□ 2.81
PPM1D-204ENST00000629650 FAM9AQ8IZU1 332 aaPredicted RBP32.6■■■□□ 2.81
PPM1D-204ENST00000629650 WDR97A6NE52 1622 aa32.6■■■□□ 2.81
PPM1D-204ENST00000629650 ABCA10Q8WWZ4 1543 aa32.59■■■□□ 2.81
PPM1D-204ENST00000629650 EEA1Q15075 1411 aa32.57■■■□□ 2.8
PPM1D-204ENST00000629650 EIF4G3O43432 1585 aaKnown RBP32.57■■■□□ 2.8
PPM1D-204ENST00000629650 AQRO60306 1485 aaKnown RBP eCLIP32.56■■■□□ 2.8
PPM1D-204ENST00000629650 KIF27Q86VH2 1401 aa32.53■■■□□ 2.8
PPM1D-204ENST00000629650 OSCARQ8IYS5 282 aa32.49■■■□□ 2.79
PPM1D-204ENST00000629650 TDRD9Q8NDG6 1382 aaKnown RBP32.47■■■□□ 2.79
PPM1D-204ENST00000629650 ABCA5Q8WWZ7 1642 aa32.41■■■□□ 2.78
PPM1D-204ENST00000629650 CSRNP3Q8WYN3 585 aa32.4■■■□□ 2.78
PPM1D-204ENST00000629650 GAPVD1Q14C86 1478 aa32.33■■■□□ 2.77
PPM1D-204ENST00000629650 PBRM1Q86U86 1689 aa32.27■■■□□ 2.76
PPM1D-204ENST00000629650 FBLN2P98095 1184 aa32.26■■■□□ 2.76
PPM1D-204ENST00000629650 IGF1RP08069 1367 aa32.26■■■□□ 2.75
PPM1D-204ENST00000629650 CHD1O14646 1710 aa32.25■■■□□ 2.75
PPM1D-204ENST00000629650 ERICH3Q5RHP9 1530 aa32.23■■■□□ 2.75
PPM1D-204ENST00000629650 SNAPC4Q5SXM2 1469 aa32.21■■■□□ 2.75
PPM1D-204ENST00000629650 KIF21BO75037 1637 aa32.2■■■□□ 2.75
PPM1D-204ENST00000629650 GRIN2BQ13224 1484 aa32.19■■■□□ 2.74
PPM1D-204ENST00000629650 LOC105371045A0A1W2PR82 267 aa32.17■■■□□ 2.74
PPM1D-204ENST00000629650 CUL7Q14999 1698 aa32.16■■■□□ 2.74
PPM1D-204ENST00000629650 PRXQ9BXM0 1461 aa32.16■■■□□ 2.74
PPM1D-204ENST00000629650 EHMT2Q96KQ7 1210 aa32.14■■■□□ 2.74
PPM1D-204ENST00000629650 CARMIL1Q5VZK9 1371 aa32.1■■■□□ 2.73
PPM1D-204ENST00000629650 MAGI1Q96QZ7 1491 aaPredicted RBP32.1■■■□□ 2.73
PPM1D-204ENST00000629650 GOLGA3Q08378 1498 aa32.1■■■□□ 2.73
PPM1D-204ENST00000629650 CHMP7Q8WUX9 453 aaPredicted RBP32.09■■■□□ 2.73
PPM1D-204ENST00000629650 RAPGEF2Q9Y4G8 1499 aa32.07■■■□□ 2.72
PPM1D-204ENST00000629650 ADAMTS12P58397 1594 aa32.03■■■□□ 2.72
PPM1D-204ENST00000629650 SYNJ2O15056 1496 aa32■■■□□ 2.71
PPM1D-204ENST00000629650 RIMBP3CA6NJZ7 1639 aa31.98■■■□□ 2.71
PPM1D-204ENST00000629650 RIMBP3BA6NNM3 1639 aa31.98■■■□□ 2.71
PPM1D-204ENST00000629650 FHAD1B1AJZ9 1412 aa31.98■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms