Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRBV27A0A0K0K1C4 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRBV27A0A0K0K1C4 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TRBV27A0A0K0K1C4 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRBV27A0A0K0K1C4 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.52
TRBV27A0A0K0K1C4 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRBV27A0A0K0K1C4 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
TRBV27A0A0K0K1C4 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC18.32■□□□□ 0.52
TRBV27A0A0K0K1C4 AP002365.1-201ENST00000603448 772 ntBASIC18.32■□□□□ 0.52
TRBV27A0A0K0K1C4 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV27A0A0K0K1C4 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
TRBV27A0A0K0K1C4 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
TRBV27A0A0K0K1C4 SHF-207ENST00000560540 2062 ntTSL 5 BASIC18.32■□□□□ 0.52
TRBV27A0A0K0K1C4 AP004833.2-201ENST00000532228 1454 ntBASIC18.32■□□□□ 0.52
TRBV27A0A0K0K1C4 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
TRBV27A0A0K0K1C4 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV27A0A0K0K1C4 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV27A0A0K0K1C4 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV27A0A0K0K1C4 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV27A0A0K0K1C4 SHF-208ENST00000560734 1731 ntTSL 3 BASIC18.31■□□□□ 0.52
TRBV27A0A0K0K1C4 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
TRBV27A0A0K0K1C4 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC18.31■□□□□ 0.52
TRBV27A0A0K0K1C4 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV27A0A0K0K1C4 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV27A0A0K0K1C4 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV27A0A0K0K1C4 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
TRBV27A0A0K0K1C4 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC18.29■□□□□ 0.52
TRBV27A0A0K0K1C4 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV27A0A0K0K1C4 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV27A0A0K0K1C4 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV27A0A0K0K1C4 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV27A0A0K0K1C4 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV27A0A0K0K1C4 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV27A0A0K0K1C4 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
TRBV27A0A0K0K1C4 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV27A0A0K0K1C4 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRBV27A0A0K0K1C4 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRBV27A0A0K0K1C4 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRBV27A0A0K0K1C4 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
TRBV27A0A0K0K1C4 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC18.27■□□□□ 0.52
TRBV27A0A0K0K1C4 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRBV27A0A0K0K1C4 AL133380.1-201ENST00000506013 324 ntBASIC18.27■□□□□ 0.52
TRBV27A0A0K0K1C4 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC18.27■□□□□ 0.51
TRBV27A0A0K0K1C4 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
TRBV27A0A0K0K1C4 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC18.25■□□□□ 0.51
TRBV27A0A0K0K1C4 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC18.24■□□□□ 0.51
TRBV27A0A0K0K1C4 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV27A0A0K0K1C4 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV27A0A0K0K1C4 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV27A0A0K0K1C4 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV27A0A0K0K1C4 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV27A0A0K0K1C4 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV27A0A0K0K1C4 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
TRBV27A0A0K0K1C4 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRBV27A0A0K0K1C4 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC18.23■□□□□ 0.51
TRBV27A0A0K0K1C4 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC18.23■□□□□ 0.51
TRBV27A0A0K0K1C4 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRBV27A0A0K0K1C4 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
TRBV27A0A0K0K1C4 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRBV27A0A0K0K1C4 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRBV27A0A0K0K1C4 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRBV27A0A0K0K1C4 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRBV27A0A0K0K1C4 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC18.22■□□□□ 0.51
TRBV27A0A0K0K1C4 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC18.22■□□□□ 0.51
TRBV27A0A0K0K1C4 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TRBV27A0A0K0K1C4 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRBV27A0A0K0K1C4 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC18.21■□□□□ 0.51
TRBV27A0A0K0K1C4 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRBV27A0A0K0K1C4 KLF16-203ENST00000592313 508 ntTSL 3 BASIC18.21■□□□□ 0.51
TRBV27A0A0K0K1C4 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRBV27A0A0K0K1C4 LINC01003-201ENST00000564834 1764 ntBASIC18.2■□□□□ 0.5
TRBV27A0A0K0K1C4 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC18.2■□□□□ 0.5
TRBV27A0A0K0K1C4 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRBV27A0A0K0K1C4 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC18.2■□□□□ 0.5
TRBV27A0A0K0K1C4 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC18.2■□□□□ 0.5
TRBV27A0A0K0K1C4 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRBV27A0A0K0K1C4 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
TRBV27A0A0K0K1C4 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV27A0A0K0K1C4 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TRBV27A0A0K0K1C4 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
TRBV27A0A0K0K1C4 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
TRBV27A0A0K0K1C4 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV27A0A0K0K1C4 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TRBV27A0A0K0K1C4 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV27A0A0K0K1C4 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
TRBV27A0A0K0K1C4 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV27A0A0K0K1C4 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
TRBV27A0A0K0K1C4 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV27A0A0K0K1C4 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC18.16■□□□□ 0.5
TRBV27A0A0K0K1C4 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV27A0A0K0K1C4 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC18.16■□□□□ 0.5
TRBV27A0A0K0K1C4 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV27A0A0K0K1C4 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV27A0A0K0K1C4 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
TRBV27A0A0K0K1C4 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV27A0A0K0K1C4 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV27A0A0K0K1C4 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV27A0A0K0K1C4 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
TRBV27A0A0K0K1C4 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV27A0A0K0K1C4 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 9.3 ms