Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 AIG1-202ENST00000357847 1395 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -12e-6■■■□□ 15.8
LARP4Q71RC2 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.665e-10■■■□□ 15.8
LARP4Q71RC2 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.291e-7■■■□□ 15.8
LARP4Q71RC2 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.131e-7■■■□□ 15.8
LARP4Q71RC2 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.071e-7■■■□□ 15.8
LARP4Q71RC2 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.151e-7■■■□□ 15.8
LARP4Q71RC2 ANKRD11-206ENST00000562275 2762 ntTSL 513.96□□□□□ -0.171e-7■■■□□ 15.8
LARP4Q71RC2 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.211e-7■■■□□ 15.8
LARP4Q71RC2 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.335e-10■■■□□ 15.8
LARP4Q71RC2 RNF214-205ENST00000531287 1706 ntTSL 2 BASIC12.94□□□□□ -0.341e-7■■■□□ 15.8
LARP4Q71RC2 ANKRD11-209ENST00000564553 471 ntTSL 312.85□□□□□ -0.351e-7■■■□□ 15.8
LARP4Q71RC2 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.395e-10■■■□□ 15.8
LARP4Q71RC2 ST6GALNAC1-211ENST00000592042 2657 ntTSL 1 (best)12.41□□□□□ -0.421e-7■■■□□ 15.8
LARP4Q71RC2 CHD4-211ENST00000544484 6554 ntTSL 2 BASIC12.17□□□□□ -0.461e-7■■■□□ 15.8
LARP4Q71RC2 ST6GALNAC1-202ENST00000359088 2321 ntTSL 1 (best)11.4□□□□□ -0.581e-7■■■□□ 15.8
LARP4Q71RC2 ST6GALNAC1-201ENST00000156626 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.61e-7■■■□□ 15.8
LARP4Q71RC2 GABRE-208ENST00000483564 2747 ntTSL 39.17□□□□□ -0.941e-7■■■□□ 15.8
LARP4Q71RC2 RNF214-206ENST00000531452 2695 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.051e-7■■■□□ 15.8
LARP4Q71RC2 GABRE-209ENST00000486255 6176 ntTSL 1 (best)8.19□□□□□ -1.11e-7■■■□□ 15.8
LARP4Q71RC2 RNF214-204ENST00000530849 2846 ntTSL 5 BASIC8.08□□□□□ -1.121e-7■■■□□ 15.8
LARP4Q71RC2 GABRE-201ENST00000370328 3152 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.261e-7■■■□□ 15.8
LARP4Q71RC2 CHD4-206ENST00000536999 318 ntTSL 35.81□□□□□ -1.481e-7■■■□□ 15.8
LARP4Q71RC2 SMCHD1-206ENST00000581631 729 ntTSL 35.79□□□□□ -1.481e-7■■■□□ 15.8
LARP4Q71RC2 GALNT12-202ENST00000470473 772 ntTSL 24.99□□□□□ -1.611e-7■■■□□ 15.8
LARP4Q71RC2 SMCHD1-203ENST00000577880 4951 ntTSL 22.83□□□□□ -1.961e-7■■■□□ 15.8
LARP4Q71RC2 SMCHD1-211ENST00000584897 4143 ntTSL 22.09□□□□□ -2.081e-7■■■□□ 15.8
LARP4Q71RC2 MIR451A-201ENST00000385059 72 ntBASIC0.99□□□□□ -2.251e-7■■■□□ 15.8
LARP4Q71RC2 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.235e-8■■■□□ 15.8
LARP4Q71RC2 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.285e-8■■■□□ 15.8
LARP4Q71RC2 VSNL1-201ENST00000295156 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.762e-6■■■□□ 15.8
LARP4Q71RC2 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.562e-6■■■□□ 15.8
LARP4Q71RC2 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.84e-7■■■□□ 15.8
LARP4Q71RC2 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.62e-12■■■□□ 15.7
LARP4Q71RC2 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.292e-12■■■□□ 15.7
LARP4Q71RC2 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.65■□□□□ 0.262e-12■■■□□ 15.7
LARP4Q71RC2 LITAF-204ENST00000570798 593 ntTSL 416.49■□□□□ 0.232e-12■■■□□ 15.7
LARP4Q71RC2 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.192e-12■■■□□ 15.7
LARP4Q71RC2 LITAF-212ENST00000573332 773 ntTSL 416.1■□□□□ 0.172e-12■■■□□ 15.7
LARP4Q71RC2 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.112e-12■■■□□ 15.7
LARP4Q71RC2 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.76■□□□□ 0.112e-12■■■□□ 15.7
LARP4Q71RC2 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.67□□□□□ -0.062e-12■■■□□ 15.7
LARP4Q71RC2 LITAF-217ENST00000575426 582 ntTSL 514.08□□□□□ -0.162e-12■■■□□ 15.7
LARP4Q71RC2 LITAF-208ENST00000571627 579 ntTSL 413.29□□□□□ -0.282e-12■■■□□ 15.7
LARP4Q71RC2 LITAF-203ENST00000413364 2292 ntTSL 2 BASIC12.78□□□□□ -0.362e-12■■■□□ 15.7
LARP4Q71RC2 LITAF-221ENST00000622633 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.452e-12■■■□□ 15.7
LARP4Q71RC2 LITAF-207ENST00000571459 677 ntTSL 5 BASIC9.6□□□□□ -0.872e-12■■■□□ 15.7
LARP4Q71RC2 MCM7-209ENST00000485286 2900 ntTSL 217.66■□□□□ 0.425e-8■■■□□ 15.7
LARP4Q71RC2 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.91■□□□□ 0.35e-8■■■□□ 15.7
LARP4Q71RC2 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.18■□□□□ 0.025e-8■■■□□ 15.7
LARP4Q71RC2 MCM7-213ENST00000621318 3084 ntTSL 1 (best) BASIC12.88□□□□□ -0.355e-8■■■□□ 15.7
LARP4Q71RC2 MCM7-201ENST00000303887 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.475e-8■■■□□ 15.7
LARP4Q71RC2 MCM7-210ENST00000489841 2515 ntTSL 1 (best)10.02□□□□□ -0.815e-8■■■□□ 15.7
LARP4Q71RC2 GRINA-205ENST00000529301 1075 ntTSL 319.38■□□□□ 0.692e-8■■■□□ 15.7
LARP4Q71RC2 GRINA-207ENST00000531992 597 ntTSL 217.94■□□□□ 0.462e-8■■■□□ 15.7
LARP4Q71RC2 BUD23-206ENST00000430270 1260 ntTSL 517.68■□□□□ 0.426e-7■■■□□ 15.7
LARP4Q71RC2 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.346e-7■■■□□ 15.7
LARP4Q71RC2 BUD23-213ENST00000463307 1815 ntTSL 1 (best)14.76□□□□□ -0.056e-7■■■□□ 15.7
LARP4Q71RC2 BUD23-209ENST00000436944 2496 ntTSL 214.46□□□□□ -0.096e-7■■■□□ 15.7
LARP4Q71RC2 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC12.38□□□□□ -0.436e-7■■■□□ 15.7
LARP4Q71RC2 BUD23-207ENST00000430446 738 ntTSL 311.75□□□□□ -0.536e-7■■■□□ 15.7
LARP4Q71RC2 BUD23-212ENST00000453316 452 ntTSL 311.29□□□□□ -0.66e-7■■■□□ 15.7
LARP4Q71RC2 BUD23-211ENST00000442099 691 ntTSL 311.07□□□□□ -0.646e-7■■■□□ 15.7
LARP4Q71RC2 BUD23-215ENST00000471215 3886 ntTSL 29.87□□□□□ -0.836e-7■■■□□ 15.7
LARP4Q71RC2 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.79□□□□□ -0.26e-61■■■□□ 15.7
LARP4Q71RC2 RPS24-204ENST00000440692 2814 ntTSL 3 BASIC12.17□□□□□ -0.466e-61■■■□□ 15.7
LARP4Q71RC2 RPS24-202ENST00000372360 510 ntAPPRIS P4 TSL 1 (best) BASIC7.43□□□□□ -1.226e-61■■■□□ 15.7
LARP4Q71RC2 RPS24-213ENST00000485708 544 ntTSL 25.32□□□□□ -1.566e-61■■■□□ 15.7
LARP4Q71RC2 AC135050.2-202ENST00000532364 499 ntTSL 419.5■□□□□ 0.715e-11■■■□□ 15.7
LARP4Q71RC2 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.29■□□□□ 0.365e-11■■■□□ 15.7
LARP4Q71RC2 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.275e-11■■■□□ 15.7
LARP4Q71RC2 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.99■□□□□ 0.155e-11■■■□□ 15.7
LARP4Q71RC2 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.48■□□□□ 0.075e-11■■■□□ 15.7
LARP4Q71RC2 VKORC1-206ENST00000420057 746 ntTSL 212.99□□□□□ -0.335e-11■■■□□ 15.7
LARP4Q71RC2 VKORC1-203ENST00000354895 901 ntTSL 1 (best) BASIC10.85□□□□□ -0.675e-11■■■□□ 15.7
LARP4Q71RC2 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.084e-7■■■□□ 15.7
LARP4Q71RC2 NUCB1-211ENST00000485798 938 ntTSL 313.9□□□□□ -0.186e-8■■■□□ 15.7
LARP4Q71RC2 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC26.85■■□□□ 1.892e-7■■■□□ 15.7
LARP4Q71RC2 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.442e-7■■■□□ 15.7
LARP4Q71RC2 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.54■■□□□ 1.362e-7■■■□□ 15.7
LARP4Q71RC2 MBOAT7-206ENST00000437868 2033 ntTSL 1 (best)19.66■□□□□ 0.742e-7■■■□□ 15.7
LARP4Q71RC2 MBOAT7-212ENST00000494142 3039 ntTSL 1 (best)15.97■□□□□ 0.152e-7■■■□□ 15.7
LARP4Q71RC2 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.225e-7■■■□□ 15.7
LARP4Q71RC2 GPI-208ENST00000588991 2021 ntTSL 220.36■□□□□ 0.855e-7■■■□□ 15.7
LARP4Q71RC2 AC092073.1-201ENST00000592740 625 ntAPPRIS P1 TSL 316.07■□□□□ 0.165e-7■■■□□ 15.7
LARP4Q71RC2 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.36■□□□□ 0.055e-7■■■□□ 15.7
LARP4Q71RC2 GPI-204ENST00000586392 1706 ntTSL 214.83□□□□□ -0.045e-7■■■□□ 15.7
LARP4Q71RC2 GPI-203ENST00000586077 3053 nt10.62□□□□□ -0.715e-7■■■□□ 15.7
LARP4Q71RC2 GPI-202ENST00000415930 4000 ntTSL 2 BASIC7.73□□□□□ -1.175e-7■■■□□ 15.7
LARP4Q71RC2 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC29.98■■■□□ 2.395e-7■■■□□ 15.7
LARP4Q71RC2 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC25.86■■□□□ 1.735e-7■■■□□ 15.7
LARP4Q71RC2 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.615e-7■■■□□ 15.7
LARP4Q71RC2 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC24.68■■□□□ 1.545e-7■■■□□ 15.7
LARP4Q71RC2 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.455e-7■■■□□ 15.7
LARP4Q71RC2 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC22.81■■□□□ 1.245e-7■■■□□ 15.7
LARP4Q71RC2 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.562e-6■■■□□ 15.7
LARP4Q71RC2 CD99-201ENST00000381177 756 ntTSL 29.5□□□□□ -0.893e-7■■■□□ 15.7
LARP4Q71RC2 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC13.3□□□□□ -0.285e-9■■■□□ 15.7
LARP4Q71RC2 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.62e-8■■■□□ 15.7
LARP4Q71RC2 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.82□□□□□ -0.042e-8■■■□□ 15.7
LARP4Q71RC2 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.879e-7■■■□□ 15.7
Retrieved 100 of 15,922 protein–RNA pairs in 242.2 ms