RNA–Protein interactions for RNA: ENST00000442099.1

BUD23-211, Transcript of BUD23, rRNA methyltransferase and ribosome maturation factor, humanhuman

TSL 3

Gene BUD23, Length 691 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BUD23-211ENST00000442099 NISCHQ9Y2I1 1504 aa31.24■■■□□ 2.59
BUD23-211ENST00000442099 ABCC9O60706 1549 aa28.24■■■□□ 2.11
BUD23-211ENST00000442099 CCDC180Q9P1Z9 1646 aa28.15■■■□□ 2.1
BUD23-211ENST00000442099 RB1CC1Q8TDY2 1594 aa26.82■■□□□ 1.88
BUD23-211ENST00000442099 NACADO15069 1562 aa26.59■■□□□ 1.85
BUD23-211ENST00000442099 DNAJC5BQ9UF47 199 aa26.57■■□□□ 1.84
BUD23-211ENST00000442099 UNC13AQ9UPW8 1703 aa26.31■■□□□ 1.8
BUD23-211ENST00000442099 DCAF8L2P0C7V8 631 aa26.3■■□□□ 1.8
BUD23-211ENST00000442099 PABPN1Q86U42 306 aaKnown RBP eCLIP26.21■■□□□ 1.796e-6■■□□□ 12
BUD23-211ENST00000442099 MYO15BQ96JP2 1530 aa26.18■■□□□ 1.78
BUD23-211ENST00000442099 BICRAQ9NZM4 1560 aa26.09■■□□□ 1.77
BUD23-211ENST00000442099 ZCCHC6Q5VYS8 1495 aaKnown RBP25.9■■□□□ 1.74
BUD23-211ENST00000442099 CHIC1Q5VXU3 224 aa25.86■■□□□ 1.73
BUD23-211ENST00000442099 DCAF1Q9Y4B6 1507 aa25.79■■□□□ 1.72
BUD23-211ENST00000442099 SHROOM4Q9ULL8 1493 aa25.69■■□□□ 1.7
BUD23-211ENST00000442099 SCRIBQ14160 1630 aa25.65■■□□□ 1.7
BUD23-211ENST00000442099 CC2D2AQ9P2K1 1620 aa25.53■■□□□ 1.68
BUD23-211ENST00000442099 EIF4G1Q04637 1599 aaKnown RBP25.45■■□□□ 1.66
BUD23-211ENST00000442099 CECR2Q9BXF3 1484 aa25.44■■□□□ 1.66
BUD23-211ENST00000442099 AEBP2Q6ZN18 517 aaPredicted RBP25.03■■□□□ 1.6
BUD23-211ENST00000442099 NCAPD3P42695 1498 aa24.52■■□□□ 1.52
BUD23-211ENST00000442099 DNAJC5Q9H3Z4 198 aa24.47■■□□□ 1.51
BUD23-211ENST00000442099 ATAD2BQ9ULI0 1458 aa24.45■■□□□ 1.5
BUD23-211ENST00000442099 SMARCA4P51532 1647 aa24.44■■□□□ 1.5
BUD23-211ENST00000442099 CUX2O14529 1486 aa24.39■■□□□ 1.5
BUD23-211ENST00000442099 HMGXB3Q12766 1538 aa24.39■■□□□ 1.49
BUD23-211ENST00000442099 SMARCA2P51531 1590 aa24.38■■□□□ 1.49
BUD23-211ENST00000442099 ERCC6Q03468 1493 aa24.38■■□□□ 1.49
BUD23-211ENST00000442099 BAZ1AQ9NRL2 1556 aaPredicted RBP24.26■■□□□ 1.47
BUD23-211ENST00000442099 NESP48681 1621 aa24.24■■□□□ 1.47
BUD23-211ENST00000442099 BAZ1BQ9UIG0 1483 aaKnown RBP24.21■■□□□ 1.47
BUD23-211ENST00000442099 PEG3Q9GZU2 1588 aa24.2■■□□□ 1.46
BUD23-211ENST00000442099 MROH2BQ7Z745 1585 aa24.09■■□□□ 1.45
BUD23-211ENST00000442099 THOC2Q8NI27 1593 aaKnown RBP24.08■■□□□ 1.44
BUD23-211ENST00000442099 LAMC3Q9Y6N6 1575 aa24.04■■□□□ 1.44
BUD23-211ENST00000442099 KIF21AQ7Z4S6 1674 aa23.98■■□□□ 1.43
BUD23-211ENST00000442099 PDS5BQ9NTI5 1447 aa23.84■■□□□ 1.41
BUD23-211ENST00000442099 WIZO95785 1651 aa23.82■■□□□ 1.4
BUD23-211ENST00000442099 CADPSQ9ULU8 1353 aa23.76■■□□□ 1.39
BUD23-211ENST00000442099 MRC2Q9UBG0 1479 aa23.7■■□□□ 1.38
BUD23-211ENST00000442099 WDR62O43379 1518 aa23.68■■□□□ 1.38
BUD23-211ENST00000442099 CEP164Q9UPV0 1460 aa23.58■■□□□ 1.37
BUD23-211ENST00000442099 FANCD2Q9BXW9 1451 aa23.53■■□□□ 1.36
BUD23-211ENST00000442099 RSF1Q96T23 1441 aaPredicted RBP23.5■■□□□ 1.35
BUD23-211ENST00000442099 CFTRP13569 1480 aa23.49■■□□□ 1.35
BUD23-211ENST00000442099 TOP2AP11388 1531 aaKnown RBP23.49■■□□□ 1.35
BUD23-211ENST00000442099 URB2Q14146 1524 aaKnown RBP23.37■■□□□ 1.33
BUD23-211ENST00000442099 TRIM41Q8WV44 630 aa23.35■■□□□ 1.33
BUD23-211ENST00000442099 PRDM2Q13029 1718 aa23.34■■□□□ 1.33
BUD23-211ENST00000442099 CCDC88BA6NC98 1476 aa23.18■■□□□ 1.3
BUD23-211ENST00000442099 OSCARQ8IYS5 282 aa23.16■■□□□ 1.3
BUD23-211ENST00000442099 ZNF608Q9ULD9 1512 aaPredicted RBP23.1■■□□□ 1.29
BUD23-211ENST00000442099 IFT140Q96RY7 1462 aa23.09■■□□□ 1.29
BUD23-211ENST00000442099 TOPBP1Q92547 1522 aa23.08■■□□□ 1.28
BUD23-211ENST00000442099 EIF4G3O43432 1585 aaKnown RBP23.02■■□□□ 1.28
BUD23-211ENST00000442099 RIMBP3CA6NJZ7 1639 aa23.02■■□□□ 1.28
BUD23-211ENST00000442099 RIMBP3BA6NNM3 1639 aa23.02■■□□□ 1.28
BUD23-211ENST00000442099 RIMBP3Q9UFD9 1639 aa23.02■■□□□ 1.28
BUD23-211ENST00000442099 DNMBPQ6XZF7 1577 aa23■■□□□ 1.27
BUD23-211ENST00000442099 ABCC8Q09428 1581 aa22.96■■□□□ 1.27
BUD23-211ENST00000442099 TARBP1Q13395 1621 aaKnown RBP22.92■■□□□ 1.26
BUD23-211ENST00000442099 PHF23Q9BUL5 403 aaPredicted RBP22.91■■□□□ 1.26
BUD23-211ENST00000442099 ARHGEF11O15085 1522 aa22.91■■□□□ 1.26
BUD23-211ENST00000442099 CHD1O14646 1710 aa22.88■■□□□ 1.25
BUD23-211ENST00000442099 POLA1P09884 1462 aaPredicted RBP22.85■■□□□ 1.25
BUD23-211ENST00000442099 AQRO60306 1485 aaKnown RBP eCLIP22.84■■□□□ 1.254e-7■■■■■ 28.5
BUD23-211ENST00000442099 RAD54L2Q9Y4B4 1467 aa22.74■■□□□ 1.23
BUD23-211ENST00000442099 ARAP1Q96P48 1450 aa22.68■■□□□ 1.22
BUD23-211ENST00000442099 FGD5Q6ZNL6 1462 aa22.67■■□□□ 1.22
BUD23-211ENST00000442099 SOGA1O94964 1423 aa22.67■■□□□ 1.22
BUD23-211ENST00000442099 WDR97A6NE52 1622 aa22.66■■□□□ 1.22
BUD23-211ENST00000442099 TDRD9Q8NDG6 1382 aaKnown RBP22.65■■□□□ 1.22
BUD23-211ENST00000442099 FBLN2P98095 1184 aa22.65■■□□□ 1.22
BUD23-211ENST00000442099 CUX1P39880 1505 aa22.65■■□□□ 1.22
BUD23-211ENST00000442099 SNAPC4Q5SXM2 1469 aa22.65■■□□□ 1.22
BUD23-211ENST00000442099 CYB5RLQ6IPT4 315 aa22.64■■□□□ 1.21
BUD23-211ENST00000442099 CLASP1Q7Z460 1538 aa22.58■■□□□ 1.21
BUD23-211ENST00000442099 MAGI1Q96QZ7 1491 aaPredicted RBP22.55■■□□□ 1.2
BUD23-211ENST00000442099 SYNJ1O43426 1573 aa22.53■■□□□ 1.2
BUD23-211ENST00000442099 GRIN2BQ13224 1484 aa22.52■■□□□ 1.2
BUD23-211ENST00000442099 PBRM1Q86U86 1689 aa22.52■■□□□ 1.2
BUD23-211ENST00000442099 SYNJ2O15056 1496 aa22.48■■□□□ 1.19
BUD23-211ENST00000442099 CHMP7Q8WUX9 453 aaPredicted RBP22.46■■□□□ 1.19
BUD23-211ENST00000442099 TRHP20396 242 aaPredicted RBP22.44■■□□□ 1.18
BUD23-211ENST00000442099 ABCA5Q8WWZ7 1642 aa22.44■■□□□ 1.18
BUD23-211ENST00000442099 GAPVD1Q14C86 1478 aa22.42■■□□□ 1.18
BUD23-211ENST00000442099 ABCA10Q8WWZ4 1543 aa22.4■■□□□ 1.18
BUD23-211ENST00000442099 SUPT5HO00267 1087 aaKnown RBP22.28■■□□□ 1.16
BUD23-211ENST00000442099 ADAMTS12P58397 1594 aa22.28■■□□□ 1.16
BUD23-211ENST00000442099 BIVM-ERCC5R4GMW8 1640 aa22.28■■□□□ 1.16
BUD23-211ENST00000442099 GRIN2AQ12879 1464 aa22.26■■□□□ 1.15
BUD23-211ENST00000442099 TOP2BQ02880 1626 aa22.24■■□□□ 1.15
BUD23-211ENST00000442099 WRNQ14191 1432 aaPredicted RBP eCLIP22.23■■□□□ 1.15
BUD23-211ENST00000442099 CEP170Q5SW79 1584 aa22.23■■□□□ 1.15
BUD23-211ENST00000442099 ERCC6L2Q5T890 1561 aa22.23■■□□□ 1.15
BUD23-211ENST00000442099 NUP160Q12769 1436 aa22.18■■□□□ 1.14
BUD23-211ENST00000442099 SHROOM2Q13796 1616 aa22.14■■□□□ 1.14
BUD23-211ENST00000442099 FHAD1B1AJZ9 1412 aa22.13■■□□□ 1.13
BUD23-211ENST00000442099 ERICH3Q5RHP9 1530 aa22.12■■□□□ 1.13
BUD23-211ENST00000442099 RUSC2Q8N2Y8 1516 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms