RNA–Protein interactions for RNA: ENST00000453316.1

BUD23-212, Transcript of BUD23, rRNA methyltransferase and ribosome maturation factor, humanhuman

TSL 3

Gene BUD23, Length 452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BUD23-212ENST00000453316 AEBP2Q6ZN18 517 aaPredicted RBP33.15■■■□□ 2.9
BUD23-212ENST00000453316 CHIC1Q5VXU3 224 aa32.06■■■□□ 2.72
BUD23-212ENST00000453316 NISCHQ9Y2I1 1504 aa31.79■■■□□ 2.68
BUD23-212ENST00000453316 ABCC9O60706 1549 aa28.79■■■□□ 2.2
BUD23-212ENST00000453316 CCDC180Q9P1Z9 1646 aa28.57■■■□□ 2.16
BUD23-212ENST00000453316 PHF23Q9BUL5 403 aaPredicted RBP28.27■■■□□ 2.12
BUD23-212ENST00000453316 SENP3Q9H4L4 574 aaPredicted RBP28.01■■■□□ 2.07
BUD23-212ENST00000453316 RB1CC1Q8TDY2 1594 aa27.28■■□□□ 1.96
BUD23-212ENST00000453316 DNAJC5BQ9UF47 199 aa27.19■■□□□ 1.94
BUD23-212ENST00000453316 NACADO15069 1562 aa27.05■■□□□ 1.92
BUD23-212ENST00000453316 DCAF8L2P0C7V8 631 aa26.89■■□□□ 1.9
BUD23-212ENST00000453316 PABPN1Q86U42 306 aaKnown RBP eCLIP26.78■■□□□ 1.886e-6■■□□□ 12
BUD23-212ENST00000453316 UNC13AQ9UPW8 1703 aa26.69■■□□□ 1.86
BUD23-212ENST00000453316 MYO15BQ96JP2 1530 aa26.62■■□□□ 1.85
BUD23-212ENST00000453316 BICRAQ9NZM4 1560 aa26.54■■□□□ 1.84
BUD23-212ENST00000453316 ZCCHC6Q5VYS8 1495 aaKnown RBP26.31■■□□□ 1.8
BUD23-212ENST00000453316 DCAF1Q9Y4B6 1507 aa26.23■■□□□ 1.79
BUD23-212ENST00000453316 FOXD1Q16676 465 aa26.14■■□□□ 1.78
BUD23-212ENST00000453316 SHROOM4Q9ULL8 1493 aa26.11■■□□□ 1.77
BUD23-212ENST00000453316 SCRIBQ14160 1630 aa26.06■■□□□ 1.76
BUD23-212ENST00000453316 CC2D2AQ9P2K1 1620 aa25.98■■□□□ 1.75
BUD23-212ENST00000453316 CECR2Q9BXF3 1484 aa25.93■■□□□ 1.74
BUD23-212ENST00000453316 PLPPR3Q6T4P5 718 aa25.89■■□□□ 1.74
BUD23-212ENST00000453316 EIF4G1Q04637 1599 aaKnown RBP25.89■■□□□ 1.73
BUD23-212ENST00000453316 DNAJC5Q9H3Z4 198 aa25.05■■□□□ 1.6
BUD23-212ENST00000453316 PPP6R1Q9UPN7 881 aa25.05■■□□□ 1.6
BUD23-212ENST00000453316 ADRA2BP18089 450 aa25■■□□□ 1.59
BUD23-212ENST00000453316 NCAPD3P42695 1498 aa25■■□□□ 1.59
BUD23-212ENST00000453316 ATAD2BQ9ULI0 1458 aa24.91■■□□□ 1.58
BUD23-212ENST00000453316 CUX2O14529 1486 aa24.84■■□□□ 1.57
BUD23-212ENST00000453316 ERCC6Q03468 1493 aa24.83■■□□□ 1.57
BUD23-212ENST00000453316 SMARCA4P51532 1647 aa24.83■■□□□ 1.57
BUD23-212ENST00000453316 SMARCA2P51531 1590 aa24.8■■□□□ 1.56
BUD23-212ENST00000453316 HMGXB3Q12766 1538 aa24.79■■□□□ 1.56
BUD23-212ENST00000453316 NESP48681 1621 aa24.69■■□□□ 1.54
BUD23-212ENST00000453316 BAZ1AQ9NRL2 1556 aaPredicted RBP24.67■■□□□ 1.54
BUD23-212ENST00000453316 BAZ1BQ9UIG0 1483 aaKnown RBP24.64■■□□□ 1.53
BUD23-212ENST00000453316 PEG3Q9GZU2 1588 aa24.59■■□□□ 1.53
BUD23-212ENST00000453316 PIAS4Q8N2W9 510 aaPredicted RBP24.57■■□□□ 1.52
BUD23-212ENST00000453316 MROH2BQ7Z745 1585 aa24.51■■□□□ 1.51
BUD23-212ENST00000453316 THOC2Q8NI27 1593 aaKnown RBP24.46■■□□□ 1.51
BUD23-212ENST00000453316 LAMC3Q9Y6N6 1575 aa24.45■■□□□ 1.5
BUD23-212ENST00000453316 KIF21AQ7Z4S6 1674 aa24.34■■□□□ 1.49
BUD23-212ENST00000453316 PDS5BQ9NTI5 1447 aa24.3■■□□□ 1.48
BUD23-212ENST00000453316 CADPSQ9ULU8 1353 aa24.23■■□□□ 1.47
BUD23-212ENST00000453316 WIZO95785 1651 aa24.2■■□□□ 1.46
BUD23-212ENST00000453316 MRC2Q9UBG0 1479 aa24.13■■□□□ 1.45
BUD23-212ENST00000453316 WDR62O43379 1518 aa24.08■■□□□ 1.45
BUD23-212ENST00000453316 MSH5O43196 834 aa24.05■■□□□ 1.44
BUD23-212ENST00000453316 CEP164Q9UPV0 1460 aa23.99■■□□□ 1.43
BUD23-212ENST00000453316 FANCD2Q9BXW9 1451 aa23.96■■□□□ 1.43
BUD23-212ENST00000453316 RSF1Q96T23 1441 aaPredicted RBP23.93■■□□□ 1.42
BUD23-212ENST00000453316 CFTRP13569 1480 aa23.93■■□□□ 1.42
BUD23-212ENST00000453316 TRIM41Q8WV44 630 aa23.88■■□□□ 1.41
BUD23-212ENST00000453316 TOP2AP11388 1531 aaKnown RBP23.86■■□□□ 1.41
BUD23-212ENST00000453316 URB2Q14146 1524 aaKnown RBP23.79■■□□□ 1.4
BUD23-212ENST00000453316 OSCARQ8IYS5 282 aa23.68■■□□□ 1.38
BUD23-212ENST00000453316 PRDM2Q13029 1718 aa23.63■■□□□ 1.37
BUD23-212ENST00000453316 CCDC88BA6NC98 1476 aa23.62■■□□□ 1.37
BUD23-212ENST00000453316 ZNF608Q9ULD9 1512 aaPredicted RBP23.54■■□□□ 1.36
BUD23-212ENST00000453316 IFT140Q96RY7 1462 aa23.51■■□□□ 1.35
BUD23-212ENST00000453316 TOPBP1Q92547 1522 aa23.49■■□□□ 1.35
BUD23-212ENST00000453316 RIMBP3CA6NJZ7 1639 aa23.41■■□□□ 1.34
BUD23-212ENST00000453316 RIMBP3BA6NNM3 1639 aa23.41■■□□□ 1.34
BUD23-212ENST00000453316 RIMBP3Q9UFD9 1639 aa23.41■■□□□ 1.34
BUD23-212ENST00000453316 ABCC8Q09428 1581 aa23.39■■□□□ 1.33
BUD23-212ENST00000453316 DNMBPQ6XZF7 1577 aa23.38■■□□□ 1.33
BUD23-212ENST00000453316 EIF4G3O43432 1585 aaKnown RBP23.37■■□□□ 1.33
BUD23-212ENST00000453316 ARHGEF11O15085 1522 aa23.33■■□□□ 1.32
BUD23-212ENST00000453316 TARBP1Q13395 1621 aaKnown RBP23.3■■□□□ 1.32
BUD23-212ENST00000453316 AQRO60306 1485 aaKnown RBP eCLIP23.29■■□□□ 1.324e-7■■■■■ 28.5
BUD23-212ENST00000453316 POLA1P09884 1462 aaPredicted RBP23.24■■□□□ 1.31
BUD23-212ENST00000453316 CHD1O14646 1710 aa23.22■■□□□ 1.31
BUD23-212ENST00000453316 RAD54L2Q9Y4B4 1467 aa23.17■■□□□ 1.3
BUD23-212ENST00000453316 CYB5RLQ6IPT4 315 aa23.16■■□□□ 1.3
BUD23-212ENST00000453316 FBLN2P98095 1184 aa23.14■■□□□ 1.29
BUD23-212ENST00000453316 TDRD9Q8NDG6 1382 aaKnown RBP23.12■■□□□ 1.29
BUD23-212ENST00000453316 SOGA1O94964 1423 aa23.11■■□□□ 1.29
BUD23-212ENST00000453316 ARAP1Q96P48 1450 aa23.1■■□□□ 1.29
BUD23-212ENST00000453316 FGD5Q6ZNL6 1462 aa23.07■■□□□ 1.28
BUD23-212ENST00000453316 SNAPC4Q5SXM2 1469 aa23.04■■□□□ 1.28
BUD23-212ENST00000453316 CUX1P39880 1505 aa23.03■■□□□ 1.28
BUD23-212ENST00000453316 WDR97A6NE52 1622 aa23■■□□□ 1.27
BUD23-212ENST00000453316 CLASP1Q7Z460 1538 aa22.97■■□□□ 1.27
BUD23-212ENST00000453316 MAGI1Q96QZ7 1491 aaPredicted RBP22.95■■□□□ 1.26
BUD23-212ENST00000453316 TRHP20396 242 aaPredicted RBP22.94■■□□□ 1.26
BUD23-212ENST00000453316 CHMP7Q8WUX9 453 aaPredicted RBP22.94■■□□□ 1.26
BUD23-212ENST00000453316 GRIN2BQ13224 1484 aa22.93■■□□□ 1.26
BUD23-212ENST00000453316 SYNJ1O43426 1573 aa22.9■■□□□ 1.26
BUD23-212ENST00000453316 SYNJ2O15056 1496 aa22.88■■□□□ 1.25
BUD23-212ENST00000453316 PPP4R3CPQ6ZMV5 832 aa22.86■■□□□ 1.25
BUD23-212ENST00000453316 GAPVD1Q14C86 1478 aa22.84■■□□□ 1.25
BUD23-212ENST00000453316 PBRM1Q86U86 1689 aa22.83■■□□□ 1.24
BUD23-212ENST00000453316 ABCA10Q8WWZ4 1543 aa22.79■■□□□ 1.24
BUD23-212ENST00000453316 MAPK8IP2Q13387 824 aaPredicted RBP22.79■■□□□ 1.24
BUD23-212ENST00000453316 ABCA5Q8WWZ7 1642 aa22.78■■□□□ 1.24
BUD23-212ENST00000453316 SUPT5HO00267 1087 aaKnown RBP22.73■■□□□ 1.23
BUD23-212ENST00000453316 SCAF1Q9H7N4 1312 aaKnown RBP22.67■■□□□ 1.22
BUD23-212ENST00000453316 WRNQ14191 1432 aaPredicted RBP eCLIP22.65■■□□□ 1.22
BUD23-212ENST00000453316 GRIN2AQ12879 1464 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms