RNA–Protein interactions for RNA: ENST00000436944.5

BUD23-209, Transcript of BUD23, rRNA methyltransferase and ribosome maturation factor, humanhuman

TSL 2

Gene BUD23, Length 2,496 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BUD23-209ENST00000436944 NISCHQ9Y2I1 1504 aa29.77■■■□□ 2.36
BUD23-209ENST00000436944 SHROOM4Q9ULL8 1493 aa25.47■■□□□ 1.67
BUD23-209ENST00000436944 CCDC180Q9P1Z9 1646 aa25.21■■□□□ 1.63
BUD23-209ENST00000436944 ZCCHC6Q5VYS8 1495 aaKnown RBP25.17■■□□□ 1.62
BUD23-209ENST00000436944 SUPT5HO00267 1087 aaKnown RBP25.03■■□□□ 1.6
BUD23-209ENST00000436944 DCAF8L2P0C7V8 631 aa24.76■■□□□ 1.55
BUD23-209ENST00000436944 DCAF1Q9Y4B6 1507 aa24.39■■□□□ 1.5
BUD23-209ENST00000436944 CHIC1Q5VXU3 224 aa24.36■■□□□ 1.49
BUD23-209ENST00000436944 MYO15BQ96JP2 1530 aa24.24■■□□□ 1.47
BUD23-209ENST00000436944 ABCC9O60706 1549 aa23.73■■□□□ 1.39
BUD23-209ENST00000436944 SCRIBQ14160 1630 aa23.69■■□□□ 1.38
BUD23-209ENST00000436944 HRCP23327 699 aa23.68■■□□□ 1.38
BUD23-209ENST00000436944 LOC105371045A0A1W2PR82 267 aa23.67■■□□□ 1.38
BUD23-209ENST00000436944 PCGF6Q9BYE7 350 aa23.66■■□□□ 1.38
BUD23-209ENST00000436944 RSF1Q96T23 1441 aaPredicted RBP23.61■■□□□ 1.37
BUD23-209ENST00000436944 NACADO15069 1562 aa23.34■■□□□ 1.33
BUD23-209ENST00000436944 RB1CC1Q8TDY2 1594 aa23.32■■□□□ 1.32
BUD23-209ENST00000436944 TRIM41Q8WV44 630 aa23.3■■□□□ 1.32
BUD23-209ENST00000436944 CECR2Q9BXF3 1484 aa23.25■■□□□ 1.31
BUD23-209ENST00000436944 PPARGC1BQ86YN6 1023 aaKnown RBP23.21■■□□□ 1.31
BUD23-209ENST00000436944 TRIM26Q12899 539 aaPredicted RBP23.18■■□□□ 1.3
BUD23-209ENST00000436944 MROH2BQ7Z745 1585 aa23.16■■□□□ 1.3
BUD23-209ENST00000436944 FAM9AQ8IZU1 332 aaPredicted RBP23.13■■□□□ 1.29
BUD23-209ENST00000436944 WIZO95785 1651 aa23.02■■□□□ 1.28
BUD23-209ENST00000436944 PELP1Q8IZL8 1130 aaKnown RBP22.96■■□□□ 1.27
BUD23-209ENST00000436944 EHMT2Q96KQ7 1210 aa22.94■■□□□ 1.26
BUD23-209ENST00000436944 BAZ1AQ9NRL2 1556 aaPredicted RBP22.84■■□□□ 1.25
BUD23-209ENST00000436944 EIF4G1Q04637 1599 aaKnown RBP22.7■■□□□ 1.22
BUD23-209ENST00000436944 ZEB1P37275 1124 aaPredicted RBP22.67■■□□□ 1.22
BUD23-209ENST00000436944 TOP2AP11388 1531 aaKnown RBP22.64■■□□□ 1.21
BUD23-209ENST00000436944 SMARCA4P51532 1647 aa22.63■■□□□ 1.21
BUD23-209ENST00000436944 CCDC88BA6NC98 1476 aa22.6■■□□□ 1.21
BUD23-209ENST00000436944 UNC13AQ9UPW8 1703 aa22.59■■□□□ 1.21
BUD23-209ENST00000436944 ABCC8Q09428 1581 aa22.54■■□□□ 1.2
BUD23-209ENST00000436944 SMARCA2P51531 1590 aa22.53■■□□□ 1.2
BUD23-209ENST00000436944 PABPN1Q86U42 306 aaKnown RBP eCLIP22.45■■□□□ 1.186e-6■■□□□ 12
BUD23-209ENST00000436944 SOGA1O94964 1423 aa22.37■■□□□ 1.17
BUD23-209ENST00000436944 BICRAQ9NZM4 1560 aa22.34■■□□□ 1.17
BUD23-209ENST00000436944 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.27■■□□□ 1.16
BUD23-209ENST00000436944 CSRNP3Q8WYN3 585 aa22.27■■□□□ 1.16
BUD23-209ENST00000436944 CEP162Q5TB80 1403 aa22.27■■□□□ 1.16
BUD23-209ENST00000436944 RUSC2Q8N2Y8 1516 aa22.27■■□□□ 1.16
BUD23-209ENST00000436944 WRNQ14191 1432 aaPredicted RBP eCLIP22.25■■□□□ 1.15
BUD23-209ENST00000436944 TNIKQ9UKE5 1360 aa22.24■■□□□ 1.15
BUD23-209ENST00000436944 EEA1Q15075 1411 aa22.22■■□□□ 1.15
BUD23-209ENST00000436944 TTBK1Q5TCY1 1321 aaPredicted RBP22.2■■□□□ 1.14
BUD23-209ENST00000436944 PEG3Q9GZU2 1588 aa22.19■■□□□ 1.14
BUD23-209ENST00000436944 CCER1Q8TC90 406 aaPredicted RBP22.19■■□□□ 1.14
BUD23-209ENST00000436944 UBTFP17480 764 aaKnown RBP22.19■■□□□ 1.14
BUD23-209ENST00000436944 MYT1Q01538 1121 aa22.17■■□□□ 1.14
BUD23-209ENST00000436944 SCAF1Q9H7N4 1312 aaKnown RBP22.14■■□□□ 1.14
BUD23-209ENST00000436944 ATAD2BQ9ULI0 1458 aa22.08■■□□□ 1.12
BUD23-209ENST00000436944 GOLGA3Q08378 1498 aa22.07■■□□□ 1.12
BUD23-209ENST00000436944 SYNJ1O43426 1573 aa22.03■■□□□ 1.12
BUD23-209ENST00000436944 BAZ1BQ9UIG0 1483 aaKnown RBP22■■□□□ 1.11
BUD23-209ENST00000436944 CEP164Q9UPV0 1460 aa21.94■■□□□ 1.1
BUD23-209ENST00000436944 KIF21BO75037 1637 aa21.89■■□□□ 1.09
BUD23-209ENST00000436944 CLIP1P30622 1438 aa21.85■■□□□ 1.09
BUD23-209ENST00000436944 RAPGEF2Q9Y4G8 1499 aa21.81■■□□□ 1.08
BUD23-209ENST00000436944 DIEXFQ68CQ4 756 aaKnown RBP21.79■■□□□ 1.08
BUD23-209ENST00000436944 VPS8Q8N3P4 1428 aa21.75■■□□□ 1.07
BUD23-209ENST00000436944 RANGAP1P46060 587 aaPredicted RBP21.75■■□□□ 1.07
BUD23-209ENST00000436944 TOP2BQ02880 1626 aa21.74■■□□□ 1.07
BUD23-209ENST00000436944 ACIN1Q9UKV3 1341 aaKnown RBP21.74■■□□□ 1.07
BUD23-209ENST00000436944 HNRNPUL2Q1KMD3 747 aaKnown RBP21.73■■□□□ 1.07
BUD23-209ENST00000436944 APLP2Q06481 763 aa21.68■■□□□ 1.06
BUD23-209ENST00000436944 BIVM-ERCC5R4GMW8 1640 aa21.64■■□□□ 1.05
BUD23-209ENST00000436944 NCAPD3P42695 1498 aa21.64■■□□□ 1.05
BUD23-209ENST00000436944 ZNF316A6NFI3 1004 aaPredicted RBP21.62■■□□□ 1.05
BUD23-209ENST00000436944 NEUROD1Q13562 356 aa21.62■■□□□ 1.05
BUD23-209ENST00000436944 HMGXB3Q12766 1538 aa21.59■■□□□ 1.05
BUD23-209ENST00000436944 PRXQ9BXM0 1461 aa21.58■■□□□ 1.05
BUD23-209ENST00000436944 CENPBP07199 599 aaPredicted RBP21.56■■□□□ 1.04
BUD23-209ENST00000436944 CUX1P39880 1505 aa21.54■■□□□ 1.04
BUD23-209ENST00000436944 ERICH3Q5RHP9 1530 aa21.54■■□□□ 1.04
BUD23-209ENST00000436944 CFTRP13569 1480 aa21.48■■□□□ 1.03
BUD23-209ENST00000436944 ARAP1Q96P48 1450 aa21.48■■□□□ 1.03
BUD23-209ENST00000436944 KIF27Q86VH2 1401 aa21.47■■□□□ 1.03
BUD23-209ENST00000436944 KANK4Q5T7N3 995 aaPredicted RBP21.44■■□□□ 1.02
BUD23-209ENST00000436944 GTF3C3Q9Y5Q9 886 aa21.44■■□□□ 1.02
BUD23-209ENST00000436944 MIER1Q8N108 512 aa21.33■■□□□ 1.01
BUD23-209ENST00000436944 ARHGAP35Q9NRY4 1499 aa21.3■■□□□ 1
BUD23-209ENST00000436944 DHX57Q6P158 1386 aaKnown RBP21.29■■□□□ 1
BUD23-209ENST00000436944 IGF1RP08069 1367 aa21.27■■□□□ 1
BUD23-209ENST00000436944 YTHDC1Q96MU7 727 aaKnown RBP21.27■□□□□ 0.99
BUD23-209ENST00000436944 CLSPNQ9HAW4 1339 aa21.26■□□□□ 0.99
BUD23-209ENST00000436944 CUX2O14529 1486 aa21.25■□□□□ 0.99
BUD23-209ENST00000436944 RRBP1Q9P2E9 1410 aaKnown RBP21.25■□□□□ 0.99
BUD23-209ENST00000436944 CADPSQ9ULU8 1353 aa21.24■□□□□ 0.99
BUD23-209ENST00000436944 PRDM2Q13029 1718 aa21.2■□□□□ 0.99
BUD23-209ENST00000436944 CCNB3Q8WWL7 1395 aa21.18■□□□□ 0.98
BUD23-209ENST00000436944 CARMIL1Q5VZK9 1371 aa21.17■□□□□ 0.98
BUD23-209ENST00000436944 FGD5Q6ZNL6 1462 aa21.15■□□□□ 0.98
BUD23-209ENST00000436944 ITGAEP38570 1179 aa21.14■□□□□ 0.98
BUD23-209ENST00000436944 TIAM1Q13009 1591 aa21.04■□□□□ 0.96
BUD23-209ENST00000436944 CC2D2AQ9P2K1 1620 aa21.03■□□□□ 0.96
BUD23-209ENST00000436944 MAP3K1Q13233 1512 aa21.03■□□□□ 0.96
BUD23-209ENST00000436944 FANCD2Q9BXW9 1451 aa21.02■□□□□ 0.96
BUD23-209ENST00000436944 P3H3Q8IVL6 736 aa21.02■□□□□ 0.96
BUD23-209ENST00000436944 RAB3GAP2Q9H2M9 1393 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms