Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 CAPN15-207ENST00000568988 911 ntTSL 324.38■■□□□ 1.491e-6■■■□□ 15.5
NCBP2P52298 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.341e-6■■■□□ 15.5
NCBP2P52298 NECAB3-211ENST00000485399 1373 ntTSL 220.43■□□□□ 0.863e-11■■■□□ 15.5
NCBP2P52298 NECAB3-213ENST00000488489 2142 ntTSL 219.09■□□□□ 0.653e-11■■■□□ 15.5
NCBP2P52298 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.06■□□□□ 0.643e-11■■■□□ 15.5
NCBP2P52298 NECAB3-222ENST00000607805 969 ntTSL 518.83■□□□□ 0.63e-11■■■□□ 15.5
NCBP2P52298 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.53e-11■■■□□ 15.5
NCBP2P52298 NECAB3-220ENST00000606699 1022 ntTSL 216.62■□□□□ 0.253e-11■■■□□ 15.5
NCBP2P52298 NECAB3-214ENST00000493590 625 ntTSL 514.58□□□□□ -0.083e-11■■■□□ 15.5
NCBP2P52298 NECAB3-219ENST00000606690 900 ntTSL 513.01□□□□□ -0.333e-11■■■□□ 15.5
NCBP2P52298 NECAB3-203ENST00000439478 925 ntTSL 513.01□□□□□ -0.333e-11■■■□□ 15.5
NCBP2P52298 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.841e-7■■■□□ 15.5
NCBP2P52298 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.181e-7■■■□□ 15.5
NCBP2P52298 PRPF4B-205ENST00000480058 6775 ntTSL 1 (best)5.91□□□□□ -1.468e-11■■■□□ 15.5
NCBP2P52298 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.618e-11■■■□□ 15.5
NCBP2P52298 PGK1-201ENST00000373316 4887 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.775e-7■■■□□ 15.5
NCBP2P52298 ENC1-206ENST00000537006 2024 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.484e-18■■■□□ 15.5
NCBP2P52298 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.194e-7■■■□□ 15.5
NCBP2P52298 RNASET2-204ENST00000421787 1924 ntTSL 219.42■□□□□ 0.74e-7■■■□□ 15.5
NCBP2P52298 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.96■□□□□ 0.634e-7■■■□□ 15.5
NCBP2P52298 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.15■□□□□ 0.54e-7■■■□□ 15.5
NCBP2P52298 RNASET2-201ENST00000028008 1220 ntTSL 517.13■□□□□ 0.334e-7■■■□□ 15.5
NCBP2P52298 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.04■□□□□ 0.324e-7■■■□□ 15.5
NCBP2P52298 RNASET2-207ENST00000478180 963 ntTSL 516.62■□□□□ 0.254e-7■■■□□ 15.5
NCBP2P52298 RNASET2-202ENST00000358165 2445 ntTSL 215.74■□□□□ 0.114e-7■■■□□ 15.5
NCBP2P52298 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.114e-7■■■□□ 15.5
NCBP2P52298 SEPT9-230ENST00000590586 572 ntTSL 418.59■□□□□ 0.572e-6■■■□□ 15.5
NCBP2P52298 USP10-208ENST00000563386 590 ntTSL 417.42■□□□□ 0.383e-11■■■□□ 15.5
NCBP2P52298 ZNF526-202ENST00000597945 573 ntTSL 417.01■□□□□ 0.318e-8■■■□□ 15.5
NCBP2P52298 USP10-205ENST00000562743 888 ntTSL 216.78■□□□□ 0.283e-11■■■□□ 15.5
NCBP2P52298 USP10-203ENST00000562092 254 ntTSL 516.7■□□□□ 0.263e-11■■■□□ 15.5
NCBP2P52298 USP10-216ENST00000569511 571 ntTSL 516.7■□□□□ 0.263e-11■■■□□ 15.5
NCBP2P52298 USP10-210ENST00000563892 570 ntTSL 316.7■□□□□ 0.263e-11■■■□□ 15.5
NCBP2P52298 USP10-211ENST00000564566 561 ntTSL 415.19■□□□□ 0.023e-11■■■□□ 15.5
NCBP2P52298 USP10-204ENST00000562283 569 ntTSL 414.34□□□□□ -0.113e-11■■■□□ 15.5
NCBP2P52298 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.143e-11■■■□□ 15.5
NCBP2P52298 USP10-202ENST00000540269 3070 ntTSL 1 (best)11.7□□□□□ -0.543e-11■■■□□ 15.5
NCBP2P52298 RAB2B-202ENST00000417141 559 ntTSL 1 (best)11.39□□□□□ -0.598e-8■■■□□ 15.5
NCBP2P52298 RAB2B-205ENST00000485996 443 ntTSL 211.36□□□□□ -0.598e-8■■■□□ 15.5
NCBP2P52298 USP10-207ENST00000563048 1315 ntTSL 210.79□□□□□ -0.683e-11■■■□□ 15.5
NCBP2P52298 USP10-219ENST00000570191 2717 ntTSL 2 BASIC10.44□□□□□ -0.743e-11■■■□□ 15.5
NCBP2P52298 ZNF526-201ENST00000301215 4023 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.828e-8■■■□□ 15.5
NCBP2P52298 RAB2B-204ENST00000475857 621 ntTSL 29.5□□□□□ -0.898e-8■■■□□ 15.5
NCBP2P52298 TYW3-205ENST00000479111 1130 ntTSL 3 BASIC9.23□□□□□ -0.938e-8■■■□□ 15.5
NCBP2P52298 USP10-215ENST00000569038 730 ntTSL 38.74□□□□□ -1.013e-11■■■□□ 15.5
NCBP2P52298 WDR89-203ENST00000554717 976 ntTSL 28.35□□□□□ -1.078e-8■■■□□ 15.5
NCBP2P52298 AL139383.1-201ENST00000454681 892 ntTSL 5 BASIC8.24□□□□□ -1.098e-8■■■□□ 15.5
NCBP2P52298 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.38e-8■■■□□ 15.5
NCBP2P52298 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.448e-8■■■□□ 15.5
NCBP2P52298 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.468e-8■■■□□ 15.5
NCBP2P52298 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.57□□□□□ -1.528e-8■■■□□ 15.5
NCBP2P52298 USP10-218ENST00000570053 502 ntTSL 33.35□□□□□ -1.873e-11■■■□□ 15.5
NCBP2P52298 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.18□□□□□ -1.98e-8■■■□□ 15.5
NCBP2P52298 DNAJB9-203ENST00000491582 584 ntTSL 219.53■□□□□ 0.725e-7■■■□□ 15.4
NCBP2P52298 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.045e-7■■■□□ 15.4
NCBP2P52298 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.658e-13■■■□□ 15.4
NCBP2P52298 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.285e-7■■■□□ 15.4
NCBP2P52298 AC017083.4-201ENST00000406334 2306 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.65e-7■■■□□ 15.4
NCBP2P52298 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.64□□□□□ -1.675e-7■■■□□ 15.4
NCBP2P52298 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC22.99■■□□□ 1.272e-6■■■□□ 15.4
NCBP2P52298 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.94■■□□□ 1.12e-6■■■□□ 15.4
NCBP2P52298 TBX2-AS1-204ENST00000591313 640 ntTSL 216.73■□□□□ 0.272e-6■■■□□ 15.4
NCBP2P52298 TBX2-AS1-205ENST00000592009 330 ntTSL 315.3■□□□□ 0.042e-6■■■□□ 15.4
NCBP2P52298 AC005746.2-201ENST00000585765 470 ntTSL 5 BASIC8.6□□□□□ -1.032e-6■■■□□ 15.4
NCBP2P52298 SMG6-201ENST00000263073 5960 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.522e-6■■■□□ 15.4
NCBP2P52298 TOR1AIP2-205ENST00000495650 888 ntTSL 29.24□□□□□ -0.931e-11■■■□□ 15.4
NCBP2P52298 TOR1AIP2-202ENST00000474318 1760 ntTSL 56.95□□□□□ -1.31e-11■■■□□ 15.4
NCBP2P52298 TOR1AIP2-204ENST00000483123 2687 ntTSL 26.81□□□□□ -1.321e-11■■■□□ 15.4
NCBP2P52298 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC6.5□□□□□ -1.371e-11■■■□□ 15.4
NCBP2P52298 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.41e-11■■■□□ 15.4
NCBP2P52298 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.51e-11■■■□□ 15.4
NCBP2P52298 SPC25-201ENST00000282074 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.723e-11■■■□□ 15.4
NCBP2P52298 SPC25-203ENST00000472216 754 ntTSL 57.4□□□□□ -1.223e-11■■■□□ 15.4
NCBP2P52298 SPC25-202ENST00000451987 596 ntTSL 33.15□□□□□ -1.913e-11■■■□□ 15.4
NCBP2P52298 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.09■□□□□ 0.811e-7■■■□□ 15.4
NCBP2P52298 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.591e-7■■■□□ 15.4
NCBP2P52298 MTOR-201ENST00000361445 8677 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91e-7■■■□□ 15.4
NCBP2P52298 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.31■□□□□ 0.25e-11■■■□□ 15.4
NCBP2P52298 PPARD-203ENST00000360694 3747 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.585e-11■■■□□ 15.4
NCBP2P52298 PPARD-204ENST00000418635 3453 ntTSL 2 BASIC11.04□□□□□ -0.645e-11■■■□□ 15.4
NCBP2P52298 PPARD-205ENST00000448077 3516 ntTSL 2 BASIC10.92□□□□□ -0.665e-11■■■□□ 15.4
NCBP2P52298 PPARD-201ENST00000311565 3774 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.775e-11■■■□□ 15.4
NCBP2P52298 NEK6-209ENST00000444973 790 ntTSL 525.5■■□□□ 1.671e-7■■■□□ 15.4
NCBP2P52298 NEK6-211ENST00000454453 732 ntTSL 322.69■■□□□ 1.221e-7■■■□□ 15.4
NCBP2P52298 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.931e-7■■■□□ 15.4
NCBP2P52298 NEK6-213ENST00000540326 2578 ntTSL 1 (best) BASIC11.73□□□□□ -0.531e-7■■■□□ 15.4
NCBP2P52298 NEK6-203ENST00000373600 3619 ntTSL 1 (best) BASIC11.18□□□□□ -0.621e-7■■■□□ 15.4
NCBP2P52298 NEK6-201ENST00000320246 3447 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.681e-7■■■□□ 15.4
NCBP2P52298 NEK6-204ENST00000373603 3447 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.021e-7■■■□□ 15.4
NCBP2P52298 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.2□□□□□ -0.147e-8■■■□□ 15.4
NCBP2P52298 OGDH-203ENST00000439616 2962 ntTSL 2 BASIC11.57□□□□□ -0.567e-8■■■□□ 15.4
NCBP2P52298 OGDH-205ENST00000444676 3309 ntTSL 5 BASIC10.33□□□□□ -0.767e-8■■■□□ 15.4
NCBP2P52298 OGDH-201ENST00000222673 4181 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.917e-8■■■□□ 15.4
NCBP2P52298 OGDH-207ENST00000449767 3479 ntAPPRIS ALT1 TSL 2 BASIC9.24□□□□□ -0.937e-8■■■□□ 15.4
NCBP2P52298 OGDH-206ENST00000447398 3474 ntTSL 5 BASIC9.02□□□□□ -0.977e-8■■■□□ 15.4
NCBP2P52298 OGDH-210ENST00000631326 4116 ntTSL 5 BASIC8.15□□□□□ -1.17e-8■■■□□ 15.4
NCBP2P52298 OGDH-202ENST00000419661 789 ntTSL 57.82□□□□□ -1.167e-8■■■□□ 15.4
NCBP2P52298 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.69■□□□□ 0.584e-6■■■□□ 15.3
NCBP2P52298 DVL1-203ENST00000472445 639 ntTSL 216.48■□□□□ 0.234e-6■■■□□ 15.3
NCBP2P52298 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.084e-6■■■□□ 15.3
Retrieved 100 of 18,329 protein–RNA pairs in 187.1 ms