RNA–Protein interactions for RNA: ENST00000439478.5

NECAB3-203, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 5

Gene NECAB3, Length 925 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-203ENST00000439478 NISCHQ9Y2I1 1504 aa35.74■■■■□ 3.31
NECAB3-203ENST00000439478 CCDC180Q9P1Z9 1646 aa32.04■■■□□ 2.72
NECAB3-203ENST00000439478 ABCC9O60706 1549 aa32.01■■■□□ 2.72
NECAB3-203ENST00000439478 RB1CC1Q8TDY2 1594 aa30.53■■■□□ 2.48
NECAB3-203ENST00000439478 NACADO15069 1562 aa30.32■■■□□ 2.44
NECAB3-203ENST00000439478 DCAF8L2P0C7V8 631 aa30.23■■■□□ 2.43
NECAB3-203ENST00000439478 MYO15BQ96JP2 1530 aa29.91■■■□□ 2.38
NECAB3-203ENST00000439478 DNAJC5BQ9UF47 199 aa29.9■■■□□ 2.38
NECAB3-203ENST00000439478 PABPN1Q86U42 306 aaKnown RBP eCLIP29.82■■■□□ 2.368e-9■■□□□ 11.7
NECAB3-203ENST00000439478 UNC13AQ9UPW8 1703 aa29.66■■■□□ 2.34
NECAB3-203ENST00000439478 ZCCHC6Q5VYS8 1495 aaKnown RBP29.63■■■□□ 2.33
NECAB3-203ENST00000439478 DCAF1Q9Y4B6 1507 aa29.54■■■□□ 2.32
NECAB3-203ENST00000439478 BICRAQ9NZM4 1560 aa29.53■■■□□ 2.32
NECAB3-203ENST00000439478 SHROOM4Q9ULL8 1493 aa29.27■■■□□ 2.28
NECAB3-203ENST00000439478 SCRIBQ14160 1630 aa29.2■■■□□ 2.27
NECAB3-203ENST00000439478 CC2D2AQ9P2K1 1620 aa28.89■■■□□ 2.22
NECAB3-203ENST00000439478 EIF4G1Q04637 1599 aaKnown RBP28.86■■■□□ 2.21
NECAB3-203ENST00000439478 CECR2Q9BXF3 1484 aa28.85■■■□□ 2.21
NECAB3-203ENST00000439478 NCAPD3P42695 1498 aa27.98■■■□□ 2.07
NECAB3-203ENST00000439478 ATAD2BQ9ULI0 1458 aa27.89■■■□□ 2.05
NECAB3-203ENST00000439478 SMARCA2P51531 1590 aa27.86■■■□□ 2.05
NECAB3-203ENST00000439478 SMARCA4P51532 1647 aa27.85■■■□□ 2.05
NECAB3-203ENST00000439478 HMGXB3Q12766 1538 aa27.78■■■□□ 2.04
NECAB3-203ENST00000439478 BAZ1AQ9NRL2 1556 aaPredicted RBP27.77■■■□□ 2.04
NECAB3-203ENST00000439478 ERCC6Q03468 1493 aa27.71■■■□□ 2.03
NECAB3-203ENST00000439478 BAZ1BQ9UIG0 1483 aaKnown RBP27.66■■■□□ 2.02
NECAB3-203ENST00000439478 CUX2O14529 1486 aa27.61■■■□□ 2.01
NECAB3-203ENST00000439478 PEG3Q9GZU2 1588 aa27.58■■■□□ 2.01
NECAB3-203ENST00000439478 MROH2BQ7Z745 1585 aa27.52■■■□□ 2
NECAB3-203ENST00000439478 DNAJC5Q9H3Z4 198 aa27.5■■□□□ 1.99
NECAB3-203ENST00000439478 NESP48681 1621 aa27.48■■□□□ 1.99
NECAB3-203ENST00000439478 LAMC3Q9Y6N6 1575 aa27.35■■□□□ 1.97
NECAB3-203ENST00000439478 PDS5BQ9NTI5 1447 aa27.24■■□□□ 1.95
NECAB3-203ENST00000439478 THOC2Q8NI27 1593 aaKnown RBP27.18■■□□□ 1.94
NECAB3-203ENST00000439478 WIZO95785 1651 aa27.17■■□□□ 1.94
NECAB3-203ENST00000439478 CADPSQ9ULU8 1353 aa27.15■■□□□ 1.94
NECAB3-203ENST00000439478 KIF21AQ7Z4S6 1674 aa27.09■■□□□ 1.93
NECAB3-203ENST00000439478 RSF1Q96T23 1441 aaPredicted RBP26.99■■□□□ 1.91
NECAB3-203ENST00000439478 MRC2Q9UBG0 1479 aa26.96■■□□□ 1.91
NECAB3-203ENST00000439478 TOP2AP11388 1531 aaKnown RBP26.89■■□□□ 1.89
NECAB3-203ENST00000439478 CEP164Q9UPV0 1460 aa26.88■■□□□ 1.89
NECAB3-203ENST00000439478 WDR62O43379 1518 aa26.86■■□□□ 1.89
NECAB3-203ENST00000439478 FANCD2Q9BXW9 1451 aa26.84■■□□□ 1.89
NECAB3-203ENST00000439478 CFTRP13569 1480 aa26.83■■□□□ 1.89
NECAB3-203ENST00000439478 CCDC88BA6NC98 1476 aa26.56■■□□□ 1.84
NECAB3-203ENST00000439478 URB2Q14146 1524 aaKnown RBP26.56■■□□□ 1.84
NECAB3-203ENST00000439478 PRDM2Q13029 1718 aa26.49■■□□□ 1.83
NECAB3-203ENST00000439478 OSCARQ8IYS5 282 aa26.38■■□□□ 1.81
NECAB3-203ENST00000439478 TRIM41Q8WV44 630 aa26.37■■□□□ 1.81
NECAB3-203ENST00000439478 IFT140Q96RY7 1462 aa26.35■■□□□ 1.81
NECAB3-203ENST00000439478 ABCC8Q09428 1581 aa26.33■■□□□ 1.8
NECAB3-203ENST00000439478 TOPBP1Q92547 1522 aa26.31■■□□□ 1.8
NECAB3-203ENST00000439478 DNMBPQ6XZF7 1577 aa26.23■■□□□ 1.79
NECAB3-203ENST00000439478 ZNF608Q9ULD9 1512 aaPredicted RBP26.23■■□□□ 1.79
NECAB3-203ENST00000439478 EIF4G3O43432 1585 aaKnown RBP26.11■■□□□ 1.77
NECAB3-203ENST00000439478 POLA1P09884 1462 aaPredicted RBP26.05■■□□□ 1.76
NECAB3-203ENST00000439478 TARBP1Q13395 1621 aaKnown RBP26.03■■□□□ 1.76
NECAB3-203ENST00000439478 AQRO60306 1485 aaKnown RBP eCLIP26.02■■□□□ 1.762e-7■■■■■ 29.3
NECAB3-203ENST00000439478 SOGA1O94964 1423 aa25.97■■□□□ 1.75
NECAB3-203ENST00000439478 RAD54L2Q9Y4B4 1467 aa25.94■■□□□ 1.74
NECAB3-203ENST00000439478 RIMBP3CA6NJZ7 1639 aa25.94■■□□□ 1.74
NECAB3-203ENST00000439478 RIMBP3BA6NNM3 1639 aa25.94■■□□□ 1.74
NECAB3-203ENST00000439478 RIMBP3Q9UFD9 1639 aa25.94■■□□□ 1.74
NECAB3-203ENST00000439478 FBLN2P98095 1184 aa25.93■■□□□ 1.74
NECAB3-203ENST00000439478 FGD5Q6ZNL6 1462 aa25.91■■□□□ 1.74
NECAB3-203ENST00000439478 ARHGEF11O15085 1522 aa25.9■■□□□ 1.74
NECAB3-203ENST00000439478 SUPT5HO00267 1087 aaKnown RBP25.89■■□□□ 1.74
NECAB3-203ENST00000439478 TDRD9Q8NDG6 1382 aaKnown RBP25.89■■□□□ 1.74
NECAB3-203ENST00000439478 WDR97A6NE52 1622 aa25.85■■□□□ 1.73
NECAB3-203ENST00000439478 CUX1P39880 1505 aa25.85■■□□□ 1.73
NECAB3-203ENST00000439478 CHD1O14646 1710 aa25.85■■□□□ 1.73
NECAB3-203ENST00000439478 SNAPC4Q5SXM2 1469 aa25.79■■□□□ 1.72
NECAB3-203ENST00000439478 CYB5RLQ6IPT4 315 aa25.75■■□□□ 1.71
NECAB3-203ENST00000439478 GRIN2BQ13224 1484 aa25.74■■□□□ 1.71
NECAB3-203ENST00000439478 CHMP7Q8WUX9 453 aaPredicted RBP25.74■■□□□ 1.71
NECAB3-203ENST00000439478 MAGI1Q96QZ7 1491 aaPredicted RBP25.73■■□□□ 1.71
NECAB3-203ENST00000439478 SYNJ1O43426 1573 aa25.65■■□□□ 1.7
NECAB3-203ENST00000439478 SYNJ2O15056 1496 aa25.65■■□□□ 1.7
NECAB3-203ENST00000439478 GAPVD1Q14C86 1478 aa25.65■■□□□ 1.7
NECAB3-203ENST00000439478 ARAP1Q96P48 1450 aa25.64■■□□□ 1.69
NECAB3-203ENST00000439478 ABCA10Q8WWZ4 1543 aa25.61■■□□□ 1.69
NECAB3-203ENST00000439478 CLASP1Q7Z460 1538 aa25.59■■□□□ 1.69
NECAB3-203ENST00000439478 WRNQ14191 1432 aaPredicted RBP eCLIP25.57■■□□□ 1.686e-7■■■■■ 33.4
NECAB3-203ENST00000439478 PBRM1Q86U86 1689 aa25.56■■□□□ 1.68
NECAB3-203ENST00000439478 ABCA5Q8WWZ7 1642 aa25.54■■□□□ 1.68
NECAB3-203ENST00000439478 TRHP20396 242 aaPredicted RBP25.5■■□□□ 1.67
NECAB3-203ENST00000439478 TOP2BQ02880 1626 aa25.47■■□□□ 1.67
NECAB3-203ENST00000439478 BIVM-ERCC5R4GMW8 1640 aa25.45■■□□□ 1.67
NECAB3-203ENST00000439478 GRIN2AQ12879 1464 aa25.4■■□□□ 1.66
NECAB3-203ENST00000439478 ADAMTS12P58397 1594 aa25.36■■□□□ 1.65
NECAB3-203ENST00000439478 FHAD1B1AJZ9 1412 aa25.34■■□□□ 1.65
NECAB3-203ENST00000439478 ERICH3Q5RHP9 1530 aa25.31■■□□□ 1.64
NECAB3-203ENST00000439478 NUP160Q12769 1436 aa25.29■■□□□ 1.64
NECAB3-203ENST00000439478 CEP170Q5SW79 1584 aa25.26■■□□□ 1.63
NECAB3-203ENST00000439478 ERCC6L2Q5T890 1561 aa25.16■■□□□ 1.62
NECAB3-203ENST00000439478 SHROOM2Q13796 1616 aa25.13■■□□□ 1.61
NECAB3-203ENST00000439478 PRG4Q92954 1404 aaPredicted RBP25.07■■□□□ 1.6
NECAB3-203ENST00000439478 JPH4Q96JJ6 628 aa25.06■■□□□ 1.6
NECAB3-203ENST00000439478 KIF27Q86VH2 1401 aa25.04■■□□□ 1.6
NECAB3-203ENST00000439478 RUSC2Q8N2Y8 1516 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms