RNA–Protein interactions for RNA: ENST00000406334.3

AC017083.4-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AC017083.4, Length 2,306 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC017083.4-201ENST00000406334 NISCHQ9Y2I1 1504 aa27.68■■■□□ 2.02
AC017083.4-201ENST00000406334 CCDC180Q9P1Z9 1646 aa24.07■■□□□ 1.44
AC017083.4-201ENST00000406334 ABCC9O60706 1549 aa23.33■■□□□ 1.33
AC017083.4-201ENST00000406334 DCAF8L2P0C7V8 631 aa23.28■■□□□ 1.32
AC017083.4-201ENST00000406334 ZCCHC6Q5VYS8 1495 aaKnown RBP23.17■■□□□ 1.3
AC017083.4-201ENST00000406334 SHROOM4Q9ULL8 1493 aa22.73■■□□□ 1.23
AC017083.4-201ENST00000406334 DCAF1Q9Y4B6 1507 aa22.72■■□□□ 1.23
AC017083.4-201ENST00000406334 NACADO15069 1562 aa22.54■■□□□ 1.2
AC017083.4-201ENST00000406334 MYO15BQ96JP2 1530 aa22.5■■□□□ 1.19
AC017083.4-201ENST00000406334 RB1CC1Q8TDY2 1594 aa22.44■■□□□ 1.18
AC017083.4-201ENST00000406334 SCRIBQ14160 1630 aa22.37■■□□□ 1.17
AC017083.4-201ENST00000406334 PABPN1Q86U42 306 aaKnown RBP eCLIP22.07■■□□□ 1.123e-6■■■■□ 23.3
AC017083.4-201ENST00000406334 UNC13AQ9UPW8 1703 aa22.05■■□□□ 1.12
AC017083.4-201ENST00000406334 BICRAQ9NZM4 1560 aa21.87■■□□□ 1.09
AC017083.4-201ENST00000406334 SUPT5HO00267 1087 aaKnown RBP21.74■■□□□ 1.07
AC017083.4-201ENST00000406334 CECR2Q9BXF3 1484 aa21.69■■□□□ 1.06
AC017083.4-201ENST00000406334 MROH2BQ7Z745 1585 aa21.47■■□□□ 1.03
AC017083.4-201ENST00000406334 RSF1Q96T23 1441 aaPredicted RBP21.46■■□□□ 1.03
AC017083.4-201ENST00000406334 BAZ1AQ9NRL2 1556 aaPredicted RBP21.34■■□□□ 1.01
AC017083.4-201ENST00000406334 SMARCA4P51532 1647 aa21.31■■□□□ 1
AC017083.4-201ENST00000406334 WIZO95785 1651 aa21.28■■□□□ 1
AC017083.4-201ENST00000406334 EIF4G1Q04637 1599 aaKnown RBP21.21■□□□□ 0.99
AC017083.4-201ENST00000406334 SLC24A1O60721 1099 aa21.18■□□□□ 0.98
AC017083.4-201ENST00000406334 ATAD2BQ9ULI0 1458 aa21.08■□□□□ 0.96
AC017083.4-201ENST00000406334 CC2D2AQ9P2K1 1620 aa20.99■□□□□ 0.95
AC017083.4-201ENST00000406334 PEG3Q9GZU2 1588 aa20.97■□□□□ 0.95
AC017083.4-201ENST00000406334 DNAJC5BQ9UF47 199 aa20.95■□□□□ 0.94
AC017083.4-201ENST00000406334 SMARCA2P51531 1590 aa20.94■□□□□ 0.94
AC017083.4-201ENST00000406334 TOP2AP11388 1531 aaKnown RBP20.93■□□□□ 0.94
AC017083.4-201ENST00000406334 BAZ1BQ9UIG0 1483 aaKnown RBP20.93■□□□□ 0.94
AC017083.4-201ENST00000406334 NCAPD3P42695 1498 aa20.88■□□□□ 0.93
AC017083.4-201ENST00000406334 CCDC88BA6NC98 1476 aa20.83■□□□□ 0.93
AC017083.4-201ENST00000406334 HMGXB3Q12766 1538 aa20.75■□□□□ 0.91
AC017083.4-201ENST00000406334 MYT1Q01538 1121 aa20.62■□□□□ 0.89
AC017083.4-201ENST00000406334 CHIC1Q5VXU3 224 aa20.58■□□□□ 0.89
AC017083.4-201ENST00000406334 PELP1Q8IZL8 1130 aaKnown RBP20.5■□□□□ 0.87
AC017083.4-201ENST00000406334 NESP48681 1621 aa20.43■□□□□ 0.86
AC017083.4-201ENST00000406334 CADPSQ9ULU8 1353 aa20.39■□□□□ 0.85
AC017083.4-201ENST00000406334 ABCC8Q09428 1581 aa20.38■□□□□ 0.85
AC017083.4-201ENST00000406334 CFTRP13569 1480 aa20.36■□□□□ 0.85
AC017083.4-201ENST00000406334 TRIM41Q8WV44 630 aa20.33■□□□□ 0.85
AC017083.4-201ENST00000406334 TTBK1Q5TCY1 1321 aaPredicted RBP20.32■□□□□ 0.84
AC017083.4-201ENST00000406334 WRNQ14191 1432 aaPredicted RBP eCLIP20.18■□□□□ 0.82
AC017083.4-201ENST00000406334 FANCD2Q9BXW9 1451 aa20.17■□□□□ 0.82
AC017083.4-201ENST00000406334 LAMC3Q9Y6N6 1575 aa20.15■□□□□ 0.82
AC017083.4-201ENST00000406334 FAM9AQ8IZU1 332 aaPredicted RBP20.14■□□□□ 0.81
AC017083.4-201ENST00000406334 SYNJ1O43426 1573 aa20.12■□□□□ 0.81
AC017083.4-201ENST00000406334 PRDM2Q13029 1718 aa20.1■□□□□ 0.81
AC017083.4-201ENST00000406334 CUX1P39880 1505 aa20.06■□□□□ 0.8
AC017083.4-201ENST00000406334 PDS5BQ9NTI5 1447 aa20.06■□□□□ 0.8
AC017083.4-201ENST00000406334 KIF21AQ7Z4S6 1674 aa20.04■□□□□ 0.8
AC017083.4-201ENST00000406334 CEP164Q9UPV0 1460 aa20.02■□□□□ 0.8
AC017083.4-201ENST00000406334 EHMT2Q96KQ7 1210 aa20■□□□□ 0.79
AC017083.4-201ENST00000406334 SOGA1O94964 1423 aa19.97■□□□□ 0.79
AC017083.4-201ENST00000406334 TOP2BQ02880 1626 aa19.96■□□□□ 0.79
AC017083.4-201ENST00000406334 URB2Q14146 1524 aaKnown RBP19.96■□□□□ 0.79
AC017083.4-201ENST00000406334 RUSC2Q8N2Y8 1516 aa19.95■□□□□ 0.78
AC017083.4-201ENST00000406334 ERCC6Q03468 1493 aa19.94■□□□□ 0.78
AC017083.4-201ENST00000406334 LOC105371045A0A1W2PR82 267 aa19.93■□□□□ 0.78
AC017083.4-201ENST00000406334 PRKCSHP14314 528 aaPredicted RBP19.92■□□□□ 0.78
AC017083.4-201ENST00000406334 TOPBP1Q92547 1522 aa19.92■□□□□ 0.78
AC017083.4-201ENST00000406334 BIVM-ERCC5R4GMW8 1640 aa19.91■□□□□ 0.78
AC017083.4-201ENST00000406334 FGD5Q6ZNL6 1462 aa19.89■□□□□ 0.77
AC017083.4-201ENST00000406334 DNMBPQ6XZF7 1577 aa19.86■□□□□ 0.77
AC017083.4-201ENST00000406334 RAD54L2Q9Y4B4 1467 aa19.85■□□□□ 0.77
AC017083.4-201ENST00000406334 MRC2Q9UBG0 1479 aa19.83■□□□□ 0.77
AC017083.4-201ENST00000406334 POLA1P09884 1462 aaPredicted RBP19.81■□□□□ 0.76
AC017083.4-201ENST00000406334 APLP2Q06481 763 aa19.81■□□□□ 0.76
AC017083.4-201ENST00000406334 DAXXQ9UER7 740 aaPredicted RBP19.8■□□□□ 0.76
AC017083.4-201ENST00000406334 CSRNP3Q8WYN3 585 aa19.74■□□□□ 0.75
AC017083.4-201ENST00000406334 CUX2O14529 1486 aa19.73■□□□□ 0.75
AC017083.4-201ENST00000406334 THOC2Q8NI27 1593 aaKnown RBP19.72■□□□□ 0.75
AC017083.4-201ENST00000406334 TDRD9Q8NDG6 1382 aaKnown RBP19.71■□□□□ 0.75
AC017083.4-201ENST00000406334 WDR62O43379 1518 aa19.7■□□□□ 0.74
AC017083.4-201ENST00000406334 KIF27Q86VH2 1401 aa19.65■□□□□ 0.74
AC017083.4-201ENST00000406334 ABCA10Q8WWZ4 1543 aa19.62■□□□□ 0.73
AC017083.4-201ENST00000406334 ZNF608Q9ULD9 1512 aaPredicted RBP19.6■□□□□ 0.73
AC017083.4-201ENST00000406334 EEA1Q15075 1411 aa19.6■□□□□ 0.73
AC017083.4-201ENST00000406334 AQRO60306 1485 aaKnown RBP eCLIP19.6■□□□□ 0.735e-6■■■□□ 16.9
AC017083.4-201ENST00000406334 TARBP1Q13395 1621 aaKnown RBP19.6■□□□□ 0.73
AC017083.4-201ENST00000406334 IGF1RP08069 1367 aa19.59■□□□□ 0.73
AC017083.4-201ENST00000406334 ERICH6Q7L0X2 663 aa19.59■□□□□ 0.73
AC017083.4-201ENST00000406334 UBTFP17480 764 aaKnown RBP19.54■□□□□ 0.72
AC017083.4-201ENST00000406334 WDR97A6NE52 1622 aa19.53■□□□□ 0.72
AC017083.4-201ENST00000406334 IFT140Q96RY7 1462 aa19.53■□□□□ 0.72
AC017083.4-201ENST00000406334 RAPGEF2Q9Y4G8 1499 aa19.52■□□□□ 0.72
AC017083.4-201ENST00000406334 GAPVD1Q14C86 1478 aa19.51■□□□□ 0.71
AC017083.4-201ENST00000406334 RANGAP1P46060 587 aaPredicted RBP19.5■□□□□ 0.71
AC017083.4-201ENST00000406334 CARMIL1Q5VZK9 1371 aa19.47■□□□□ 0.71
AC017083.4-201ENST00000406334 ABCA5Q8WWZ7 1642 aa19.47■□□□□ 0.71
AC017083.4-201ENST00000406334 PRXQ9BXM0 1461 aa19.46■□□□□ 0.71
AC017083.4-201ENST00000406334 GOLGA3Q08378 1498 aa19.43■□□□□ 0.7
AC017083.4-201ENST00000406334 KIF21BO75037 1637 aa19.4■□□□□ 0.7
AC017083.4-201ENST00000406334 EIF4G3O43432 1585 aaKnown RBP19.4■□□□□ 0.7
AC017083.4-201ENST00000406334 GRIN2BQ13224 1484 aa19.36■□□□□ 0.69
AC017083.4-201ENST00000406334 PBRM1Q86U86 1689 aa19.35■□□□□ 0.69
AC017083.4-201ENST00000406334 ERICH3Q5RHP9 1530 aa19.34■□□□□ 0.69
AC017083.4-201ENST00000406334 FBLN2P98095 1184 aa19.34■□□□□ 0.69
AC017083.4-201ENST00000406334 TNIKQ9UKE5 1360 aa19.34■□□□□ 0.69
AC017083.4-201ENST00000406334 SNAPC4Q5SXM2 1469 aa19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms