RNA–Protein interactions for RNA: ENST00000607805.5

NECAB3-222, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 5

Gene NECAB3, Length 969 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-222ENST00000607805 NISCHQ9Y2I1 1504 aa53.33■■■■■ 6.13
NECAB3-222ENST00000607805 CCDC180Q9P1Z9 1646 aa48.01■■■■■ 5.28
NECAB3-222ENST00000607805 ABCC9O60706 1549 aa47.97■■■■■ 5.27
NECAB3-222ENST00000607805 RB1CC1Q8TDY2 1594 aa45.67■■■■■ 4.9
NECAB3-222ENST00000607805 NACADO15069 1562 aa45.35■■■■■ 4.85
NECAB3-222ENST00000607805 DNAJC5BQ9UF47 199 aa45.2■■■■■ 4.83
NECAB3-222ENST00000607805 UNC13AQ9UPW8 1703 aa44.85■■■■■ 4.77
NECAB3-222ENST00000607805 DCAF8L2P0C7V8 631 aa44.81■■■■■ 4.76
NECAB3-222ENST00000607805 MYO15BQ96JP2 1530 aa44.74■■■■■ 4.75
NECAB3-222ENST00000607805 PABPN1Q86U42 306 aaKnown RBP eCLIP44.58■■■■■ 4.738e-9■■□□□ 11.7
NECAB3-222ENST00000607805 BICRAQ9NZM4 1560 aa44.45■■■■■ 4.71
NECAB3-222ENST00000607805 ZCCHC6Q5VYS8 1495 aaKnown RBP44.17■■■■■ 4.66
NECAB3-222ENST00000607805 DCAF1Q9Y4B6 1507 aa44.1■■■■■ 4.65
NECAB3-222ENST00000607805 SHROOM4Q9ULL8 1493 aa43.78■■■■■ 4.6
NECAB3-222ENST00000607805 SCRIBQ14160 1630 aa43.61■■■■■ 4.57
NECAB3-222ENST00000607805 CC2D2AQ9P2K1 1620 aa43.44■■■■■ 4.54
NECAB3-222ENST00000607805 EIF4G1Q04637 1599 aaKnown RBP43.29■■■■■ 4.52
NECAB3-222ENST00000607805 CECR2Q9BXF3 1484 aa43.25■■■■■ 4.51
NECAB3-222ENST00000607805 NCAPD3P42695 1498 aa41.86■■■■■ 4.29
NECAB3-222ENST00000607805 ATAD2BQ9ULI0 1458 aa41.7■■■■■ 4.27
NECAB3-222ENST00000607805 SMARCA4P51532 1647 aa41.66■■■■■ 4.26
NECAB3-222ENST00000607805 DNAJC5Q9H3Z4 198 aa41.59■■■■■ 4.25
NECAB3-222ENST00000607805 SMARCA2P51531 1590 aa41.57■■■■■ 4.25
NECAB3-222ENST00000607805 HMGXB3Q12766 1538 aa41.56■■■■■ 4.24
NECAB3-222ENST00000607805 CUX2O14529 1486 aa41.47■■■■■ 4.23
NECAB3-222ENST00000607805 BAZ1AQ9NRL2 1556 aaPredicted RBP41.38■■■■■ 4.22
NECAB3-222ENST00000607805 ERCC6Q03468 1493 aa41.38■■■■■ 4.21
NECAB3-222ENST00000607805 PEG3Q9GZU2 1588 aa41.32■■■■■ 4.2
NECAB3-222ENST00000607805 BAZ1BQ9UIG0 1483 aaKnown RBP41.23■■■■■ 4.19
NECAB3-222ENST00000607805 NESP48681 1621 aa41.22■■■■■ 4.19
NECAB3-222ENST00000607805 MROH2BQ7Z745 1585 aa41.08■■■■■ 4.17
NECAB3-222ENST00000607805 LAMC3Q9Y6N6 1575 aa40.95■■■■■ 4.15
NECAB3-222ENST00000607805 THOC2Q8NI27 1593 aaKnown RBP40.92■■■■■ 4.14
NECAB3-222ENST00000607805 KIF21AQ7Z4S6 1674 aa40.79■■■■■ 4.12
NECAB3-222ENST00000607805 PDS5BQ9NTI5 1447 aa40.63■■■■■ 4.09
NECAB3-222ENST00000607805 WIZO95785 1651 aa40.62■■■■■ 4.09
NECAB3-222ENST00000607805 CADPSQ9ULU8 1353 aa40.53■■■■■ 4.08
NECAB3-222ENST00000607805 MRC2Q9UBG0 1479 aa40.32■■■■■ 4.04
NECAB3-222ENST00000607805 WDR62O43379 1518 aa40.29■■■■■ 4.04
NECAB3-222ENST00000607805 RSF1Q96T23 1441 aaPredicted RBP40.15■■■■■ 4.02
NECAB3-222ENST00000607805 CEP164Q9UPV0 1460 aa40.11■■■■■ 4.01
NECAB3-222ENST00000607805 CFTRP13569 1480 aa40.08■■■■■ 4.01
NECAB3-222ENST00000607805 FANCD2Q9BXW9 1451 aa40.07■■■■■ 4
NECAB3-222ENST00000607805 TOP2AP11388 1531 aaKnown RBP40.06■■■■■ 4
NECAB3-222ENST00000607805 PRDM2Q13029 1718 aa39.85■■■■□ 3.97
NECAB3-222ENST00000607805 URB2Q14146 1524 aaKnown RBP39.8■■■■□ 3.96
NECAB3-222ENST00000607805 CCDC88BA6NC98 1476 aa39.59■■■■□ 3.93
NECAB3-222ENST00000607805 TRIM41Q8WV44 630 aa39.55■■■■□ 3.92
NECAB3-222ENST00000607805 OSCARQ8IYS5 282 aa39.46■■■■□ 3.91
NECAB3-222ENST00000607805 IFT140Q96RY7 1462 aa39.33■■■■□ 3.89
NECAB3-222ENST00000607805 TOPBP1Q92547 1522 aa39.33■■■■□ 3.89
NECAB3-222ENST00000607805 ZNF608Q9ULD9 1512 aaPredicted RBP39.3■■■■□ 3.88
NECAB3-222ENST00000607805 ABCC8Q09428 1581 aa39.21■■■■□ 3.87
NECAB3-222ENST00000607805 DNMBPQ6XZF7 1577 aa39.19■■■■□ 3.86
NECAB3-222ENST00000607805 EIF4G3O43432 1585 aaKnown RBP39.12■■■■□ 3.85
NECAB3-222ENST00000607805 RIMBP3CA6NJZ7 1639 aa39.1■■■■□ 3.85
NECAB3-222ENST00000607805 RIMBP3BA6NNM3 1639 aa39.1■■■■□ 3.85
NECAB3-222ENST00000607805 RIMBP3Q9UFD9 1639 aa39.1■■■■□ 3.85
NECAB3-222ENST00000607805 TARBP1Q13395 1621 aaKnown RBP39.07■■■■□ 3.84
NECAB3-222ENST00000607805 CHD1O14646 1710 aa38.92■■■■□ 3.82
NECAB3-222ENST00000607805 ARHGEF11O15085 1522 aa38.92■■■■□ 3.82
NECAB3-222ENST00000607805 POLA1P09884 1462 aaPredicted RBP38.92■■■■□ 3.82
NECAB3-222ENST00000607805 AQRO60306 1485 aaKnown RBP eCLIP38.9■■■■□ 3.822e-7■■■■■ 29.3
NECAB3-222ENST00000607805 RAD54L2Q9Y4B4 1467 aa38.74■■■■□ 3.79
NECAB3-222ENST00000607805 SOGA1O94964 1423 aa38.67■■■■□ 3.78
NECAB3-222ENST00000607805 WDR97A6NE52 1622 aa38.65■■■■□ 3.78
NECAB3-222ENST00000607805 FGD5Q6ZNL6 1462 aa38.62■■■■□ 3.77
NECAB3-222ENST00000607805 CUX1P39880 1505 aa38.61■■■■□ 3.77
NECAB3-222ENST00000607805 TDRD9Q8NDG6 1382 aaKnown RBP38.6■■■■□ 3.77
NECAB3-222ENST00000607805 FBLN2P98095 1184 aa38.53■■■■□ 3.76
NECAB3-222ENST00000607805 ARAP1Q96P48 1450 aa38.53■■■■□ 3.76
NECAB3-222ENST00000607805 CYB5RLQ6IPT4 315 aa38.52■■■■□ 3.76
NECAB3-222ENST00000607805 SNAPC4Q5SXM2 1469 aa38.49■■■■□ 3.75
NECAB3-222ENST00000607805 CLASP1Q7Z460 1538 aa38.43■■■■□ 3.74
NECAB3-222ENST00000607805 MAGI1Q96QZ7 1491 aaPredicted RBP38.42■■■■□ 3.74
NECAB3-222ENST00000607805 GRIN2BQ13224 1484 aa38.38■■■■□ 3.73
NECAB3-222ENST00000607805 PBRM1Q86U86 1689 aa38.34■■■■□ 3.73
NECAB3-222ENST00000607805 SYNJ1O43426 1573 aa38.33■■■■□ 3.73
NECAB3-222ENST00000607805 SYNJ2O15056 1496 aa38.28■■■■□ 3.72
NECAB3-222ENST00000607805 CHMP7Q8WUX9 453 aaPredicted RBP38.27■■■■□ 3.72
NECAB3-222ENST00000607805 ABCA5Q8WWZ7 1642 aa38.23■■■■□ 3.71
NECAB3-222ENST00000607805 GAPVD1Q14C86 1478 aa38.22■■■■□ 3.71
NECAB3-222ENST00000607805 ABCA10Q8WWZ4 1543 aa38.22■■■■□ 3.71
NECAB3-222ENST00000607805 SUPT5HO00267 1087 aaKnown RBP38.08■■■■□ 3.69
NECAB3-222ENST00000607805 TRHP20396 242 aaPredicted RBP38.06■■■■□ 3.68
NECAB3-222ENST00000607805 BIVM-ERCC5R4GMW8 1640 aa38.02■■■■□ 3.68
NECAB3-222ENST00000607805 TOP2BQ02880 1626 aa37.98■■■■□ 3.67
NECAB3-222ENST00000607805 WRNQ14191 1432 aaPredicted RBP eCLIP37.95■■■■□ 3.676e-7■■■■■ 33.4
NECAB3-222ENST00000607805 ADAMTS12P58397 1594 aa37.91■■■■□ 3.66
NECAB3-222ENST00000607805 GRIN2AQ12879 1464 aa37.9■■■■□ 3.66
NECAB3-222ENST00000607805 CEP170Q5SW79 1584 aa37.82■■■■□ 3.65
NECAB3-222ENST00000607805 NUP160Q12769 1436 aa37.81■■■■□ 3.64
NECAB3-222ENST00000607805 ERCC6L2Q5T890 1561 aa37.8■■■■□ 3.64
NECAB3-222ENST00000607805 SHROOM2Q13796 1616 aa37.75■■■■□ 3.63
NECAB3-222ENST00000607805 ERICH3Q5RHP9 1530 aa37.74■■■■□ 3.63
NECAB3-222ENST00000607805 FHAD1B1AJZ9 1412 aa37.73■■■■□ 3.63
NECAB3-222ENST00000607805 RUSC2Q8N2Y8 1516 aa37.39■■■■□ 3.58
NECAB3-222ENST00000607805 PRG4Q92954 1404 aaPredicted RBP37.38■■■■□ 3.57
NECAB3-222ENST00000607805 KIF13AQ9H1H9 1805 aa37.37■■■■□ 3.57
NECAB3-222ENST00000607805 JPH4Q96JJ6 628 aa37.34■■■■□ 3.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms