RNA–Protein interactions for RNA: ENST00000493590.1

NECAB3-214, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 5

Gene NECAB3, Length 625 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-214ENST00000493590 NISCHQ9Y2I1 1504 aa42.61■■■■■ 4.41
NECAB3-214ENST00000493590 ABCC9O60706 1549 aa39.41■■■■□ 3.9
NECAB3-214ENST00000493590 CCDC180Q9P1Z9 1646 aa38.56■■■■□ 3.76
NECAB3-214ENST00000493590 DNAJC5BQ9UF47 199 aa37.59■■■■□ 3.61
NECAB3-214ENST00000493590 RB1CC1Q8TDY2 1594 aa37.11■■■■□ 3.53
NECAB3-214ENST00000493590 NACADO15069 1562 aa36.62■■■■□ 3.45
NECAB3-214ENST00000493590 PABPN1Q86U42 306 aaKnown RBP eCLIP36.58■■■■□ 3.451e-8■□□□□ 10.3
NECAB3-214ENST00000493590 DCAF8L2P0C7V8 631 aa36.46■■■■□ 3.43
NECAB3-214ENST00000493590 UNC13AQ9UPW8 1703 aa36.31■■■■□ 3.4
NECAB3-214ENST00000493590 BICRAQ9NZM4 1560 aa36.04■■■■□ 3.36
NECAB3-214ENST00000493590 MYO15BQ96JP2 1530 aa35.77■■■■□ 3.32
NECAB3-214ENST00000493590 CECR2Q9BXF3 1484 aa35.54■■■■□ 3.28
NECAB3-214ENST00000493590 CC2D2AQ9P2K1 1620 aa35.54■■■■□ 3.28
NECAB3-214ENST00000493590 SHROOM4Q9ULL8 1493 aa35.38■■■■□ 3.25
NECAB3-214ENST00000493590 EIF4G1Q04637 1599 aaKnown RBP35.24■■■■□ 3.23
NECAB3-214ENST00000493590 SCRIBQ14160 1630 aa35.21■■■■□ 3.23
NECAB3-214ENST00000493590 ZCCHC6Q5VYS8 1495 aaKnown RBP35.14■■■■□ 3.22
NECAB3-214ENST00000493590 DCAF1Q9Y4B6 1507 aa35.06■■■■□ 3.2
NECAB3-214ENST00000493590 DNAJC5Q9H3Z4 198 aa35.03■■■■□ 3.2
NECAB3-214ENST00000493590 CUX2O14529 1486 aa34.19■■■■□ 3.06
NECAB3-214ENST00000493590 ERCC6Q03468 1493 aa34.1■■■■□ 3.05
NECAB3-214ENST00000493590 NCAPD3P42695 1498 aa33.79■■■■□ 3
NECAB3-214ENST00000493590 NESP48681 1621 aa33.63■■■□□ 2.97
NECAB3-214ENST00000493590 ATAD2BQ9ULI0 1458 aa33.63■■■□□ 2.97
NECAB3-214ENST00000493590 HMGXB3Q12766 1538 aa33.5■■■□□ 2.95
NECAB3-214ENST00000493590 SMARCA2P51531 1590 aa33.49■■■□□ 2.95
NECAB3-214ENST00000493590 SMARCA4P51532 1647 aa33.43■■■□□ 2.94
NECAB3-214ENST00000493590 THOC2Q8NI27 1593 aaKnown RBP33.41■■■□□ 2.94
NECAB3-214ENST00000493590 TRIM41Q8WV44 630 aa33.35■■■□□ 2.93
NECAB3-214ENST00000493590 BAZ1BQ9UIG0 1483 aaKnown RBP33.31■■■□□ 2.92
NECAB3-214ENST00000493590 LAMC3Q9Y6N6 1575 aa33.2■■■□□ 2.91
NECAB3-214ENST00000493590 KIF21AQ7Z4S6 1674 aa33.19■■■□□ 2.9
NECAB3-214ENST00000493590 BAZ1AQ9NRL2 1556 aaPredicted RBP33.13■■■□□ 2.89
NECAB3-214ENST00000493590 PDS5BQ9NTI5 1447 aa33.03■■■□□ 2.88
NECAB3-214ENST00000493590 PEG3Q9GZU2 1588 aa33.03■■■□□ 2.88
NECAB3-214ENST00000493590 MROH2BQ7Z745 1585 aa32.86■■■□□ 2.85
NECAB3-214ENST00000493590 MRC2Q9UBG0 1479 aa32.83■■■□□ 2.85
NECAB3-214ENST00000493590 CADPSQ9ULU8 1353 aa32.76■■■□□ 2.83
NECAB3-214ENST00000493590 WDR62O43379 1518 aa32.75■■■□□ 2.83
NECAB3-214ENST00000493590 CEP164Q9UPV0 1460 aa32.55■■■□□ 2.8
NECAB3-214ENST00000493590 OSCARQ8IYS5 282 aa32.52■■■□□ 2.8
NECAB3-214ENST00000493590 WIZO95785 1651 aa32.48■■■□□ 2.79
NECAB3-214ENST00000493590 FANCD2Q9BXW9 1451 aa32.45■■■□□ 2.79
NECAB3-214ENST00000493590 RIMBP3CA6NJZ7 1639 aa32.24■■■□□ 2.75
NECAB3-214ENST00000493590 RIMBP3BA6NNM3 1639 aa32.24■■■□□ 2.75
NECAB3-214ENST00000493590 RIMBP3Q9UFD9 1639 aa32.24■■■□□ 2.75
NECAB3-214ENST00000493590 URB2Q14146 1524 aaKnown RBP32.22■■■□□ 2.75
NECAB3-214ENST00000493590 CFTRP13569 1480 aa32.22■■■□□ 2.75
NECAB3-214ENST00000493590 ARHGEF11O15085 1522 aa32.04■■■□□ 2.72
NECAB3-214ENST00000493590 ZNF608Q9ULD9 1512 aaPredicted RBP31.98■■■□□ 2.71
NECAB3-214ENST00000493590 TOP2AP11388 1531 aaKnown RBP31.95■■■□□ 2.71
NECAB3-214ENST00000493590 PRDM2Q13029 1718 aa31.9■■■□□ 2.7
NECAB3-214ENST00000493590 IFT140Q96RY7 1462 aa31.9■■■□□ 2.7
NECAB3-214ENST00000493590 CYB5RLQ6IPT4 315 aa31.88■■■□□ 2.69
NECAB3-214ENST00000493590 RSF1Q96T23 1441 aaPredicted RBP31.86■■■□□ 2.69
NECAB3-214ENST00000493590 TRHP20396 242 aaPredicted RBP31.83■■■□□ 2.69
NECAB3-214ENST00000493590 EIF4G3O43432 1585 aaKnown RBP31.77■■■□□ 2.68
NECAB3-214ENST00000493590 TOPBP1Q92547 1522 aa31.74■■■□□ 2.67
NECAB3-214ENST00000493590 CHD1O14646 1710 aa31.71■■■□□ 2.67
NECAB3-214ENST00000493590 ARAP1Q96P48 1450 aa31.66■■■□□ 2.66
NECAB3-214ENST00000493590 FBLN2P98095 1184 aa31.62■■■□□ 2.65
NECAB3-214ENST00000493590 CCDC88BA6NC98 1476 aa31.6■■■□□ 2.65
NECAB3-214ENST00000493590 AQRO60306 1485 aaKnown RBP eCLIP31.59■■■□□ 2.653e-7■■■■■ 29
NECAB3-214ENST00000493590 ABCC8Q09428 1581 aa31.56■■■□□ 2.64
NECAB3-214ENST00000493590 DNMBPQ6XZF7 1577 aa31.56■■■□□ 2.64
NECAB3-214ENST00000493590 TARBP1Q13395 1621 aaKnown RBP31.5■■■□□ 2.63
NECAB3-214ENST00000493590 AEBP2Q6ZN18 517 aaPredicted RBP31.46■■■□□ 2.63
NECAB3-214ENST00000493590 POLA1P09884 1462 aaPredicted RBP31.36■■■□□ 2.61
NECAB3-214ENST00000493590 RAD54L2Q9Y4B4 1467 aa31.31■■■□□ 2.6
NECAB3-214ENST00000493590 TDRD9Q8NDG6 1382 aaKnown RBP31.28■■■□□ 2.6
NECAB3-214ENST00000493590 SNAPC4Q5SXM2 1469 aa31.26■■■□□ 2.59
NECAB3-214ENST00000493590 CLASP1Q7Z460 1538 aa31.24■■■□□ 2.59
NECAB3-214ENST00000493590 SOGA1O94964 1423 aa31.21■■■□□ 2.59
NECAB3-214ENST00000493590 SYNJ1O43426 1573 aa31.19■■■□□ 2.58
NECAB3-214ENST00000493590 CHMP7Q8WUX9 453 aaPredicted RBP31.18■■■□□ 2.58
NECAB3-214ENST00000493590 FGD5Q6ZNL6 1462 aa31.08■■■□□ 2.57
NECAB3-214ENST00000493590 MAGI1Q96QZ7 1491 aaPredicted RBP31.08■■■□□ 2.57
NECAB3-214ENST00000493590 WDR97A6NE52 1622 aa31.06■■■□□ 2.56
NECAB3-214ENST00000493590 GRIN2BQ13224 1484 aa31.01■■■□□ 2.56
NECAB3-214ENST00000493590 SYNJ2O15056 1496 aa31■■■□□ 2.55
NECAB3-214ENST00000493590 GAPVD1Q14C86 1478 aa31■■■□□ 2.55
NECAB3-214ENST00000493590 CUX1P39880 1505 aa30.93■■■□□ 2.54
NECAB3-214ENST00000493590 PBRM1Q86U86 1689 aa30.91■■■□□ 2.54
NECAB3-214ENST00000493590 ERCC6L2Q5T890 1561 aa30.77■■■□□ 2.52
NECAB3-214ENST00000493590 ABCA5Q8WWZ7 1642 aa30.69■■■□□ 2.5
NECAB3-214ENST00000493590 GRIN2AQ12879 1464 aa30.63■■■□□ 2.49
NECAB3-214ENST00000493590 ABCA10Q8WWZ4 1543 aa30.63■■■□□ 2.49
NECAB3-214ENST00000493590 CEP170Q5SW79 1584 aa30.62■■■□□ 2.49
NECAB3-214ENST00000493590 KIF13AQ9H1H9 1805 aa30.56■■■□□ 2.48
NECAB3-214ENST00000493590 ADAMTS12P58397 1594 aa30.54■■■□□ 2.48
NECAB3-214ENST00000493590 NUP160Q12769 1436 aa30.5■■■□□ 2.47
NECAB3-214ENST00000493590 SHROOM2Q13796 1616 aa30.48■■■□□ 2.47
NECAB3-214ENST00000493590 WRNQ14191 1432 aaPredicted RBP eCLIP30.38■■■□□ 2.456e-7■■■■■ 33.4
NECAB3-214ENST00000493590 FHAD1B1AJZ9 1412 aa30.37■■■□□ 2.45
NECAB3-214ENST00000493590 PRG4Q92954 1404 aaPredicted RBP30.34■■■□□ 2.45
NECAB3-214ENST00000493590 FAM69CQ0P6D2 419 aa30.32■■■□□ 2.44
NECAB3-214ENST00000493590 ABCC10Q5T3U5 1492 aa30.25■■■□□ 2.43
NECAB3-214ENST00000493590 ERICH3Q5RHP9 1530 aa30.23■■■□□ 2.43
NECAB3-214ENST00000493590 NPM1P06748 294 aaKnown RBP eCLIP30.23■■■□□ 2.43
NECAB3-214ENST00000493590 JPH4Q96JJ6 628 aa30.22■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms