RNA–Protein interactions for RNA: ENST00000606690.5

NECAB3-219, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 5

Gene NECAB3, Length 900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-219ENST00000606690 NISCHQ9Y2I1 1504 aa35.74■■■■□ 3.31
NECAB3-219ENST00000606690 CCDC180Q9P1Z9 1646 aa32.04■■■□□ 2.72
NECAB3-219ENST00000606690 ABCC9O60706 1549 aa32.01■■■□□ 2.72
NECAB3-219ENST00000606690 RB1CC1Q8TDY2 1594 aa30.53■■■□□ 2.48
NECAB3-219ENST00000606690 NACADO15069 1562 aa30.32■■■□□ 2.44
NECAB3-219ENST00000606690 DCAF8L2P0C7V8 631 aa30.23■■■□□ 2.43
NECAB3-219ENST00000606690 MYO15BQ96JP2 1530 aa29.91■■■□□ 2.38
NECAB3-219ENST00000606690 DNAJC5BQ9UF47 199 aa29.9■■■□□ 2.38
NECAB3-219ENST00000606690 PABPN1Q86U42 306 aaKnown RBP eCLIP29.82■■■□□ 2.368e-9■■□□□ 11.7
NECAB3-219ENST00000606690 UNC13AQ9UPW8 1703 aa29.66■■■□□ 2.34
NECAB3-219ENST00000606690 ZCCHC6Q5VYS8 1495 aaKnown RBP29.63■■■□□ 2.33
NECAB3-219ENST00000606690 DCAF1Q9Y4B6 1507 aa29.54■■■□□ 2.32
NECAB3-219ENST00000606690 BICRAQ9NZM4 1560 aa29.53■■■□□ 2.32
NECAB3-219ENST00000606690 SHROOM4Q9ULL8 1493 aa29.27■■■□□ 2.28
NECAB3-219ENST00000606690 SCRIBQ14160 1630 aa29.2■■■□□ 2.27
NECAB3-219ENST00000606690 CC2D2AQ9P2K1 1620 aa28.89■■■□□ 2.22
NECAB3-219ENST00000606690 EIF4G1Q04637 1599 aaKnown RBP28.86■■■□□ 2.21
NECAB3-219ENST00000606690 CECR2Q9BXF3 1484 aa28.85■■■□□ 2.21
NECAB3-219ENST00000606690 NCAPD3P42695 1498 aa27.98■■■□□ 2.07
NECAB3-219ENST00000606690 ATAD2BQ9ULI0 1458 aa27.89■■■□□ 2.05
NECAB3-219ENST00000606690 SMARCA2P51531 1590 aa27.86■■■□□ 2.05
NECAB3-219ENST00000606690 SMARCA4P51532 1647 aa27.85■■■□□ 2.05
NECAB3-219ENST00000606690 HMGXB3Q12766 1538 aa27.78■■■□□ 2.04
NECAB3-219ENST00000606690 BAZ1AQ9NRL2 1556 aaPredicted RBP27.77■■■□□ 2.04
NECAB3-219ENST00000606690 ERCC6Q03468 1493 aa27.71■■■□□ 2.03
NECAB3-219ENST00000606690 BAZ1BQ9UIG0 1483 aaKnown RBP27.66■■■□□ 2.02
NECAB3-219ENST00000606690 CUX2O14529 1486 aa27.61■■■□□ 2.01
NECAB3-219ENST00000606690 PEG3Q9GZU2 1588 aa27.58■■■□□ 2.01
NECAB3-219ENST00000606690 MROH2BQ7Z745 1585 aa27.52■■■□□ 2
NECAB3-219ENST00000606690 DNAJC5Q9H3Z4 198 aa27.5■■□□□ 1.99
NECAB3-219ENST00000606690 NESP48681 1621 aa27.48■■□□□ 1.99
NECAB3-219ENST00000606690 LAMC3Q9Y6N6 1575 aa27.35■■□□□ 1.97
NECAB3-219ENST00000606690 PDS5BQ9NTI5 1447 aa27.24■■□□□ 1.95
NECAB3-219ENST00000606690 THOC2Q8NI27 1593 aaKnown RBP27.18■■□□□ 1.94
NECAB3-219ENST00000606690 WIZO95785 1651 aa27.17■■□□□ 1.94
NECAB3-219ENST00000606690 CADPSQ9ULU8 1353 aa27.15■■□□□ 1.94
NECAB3-219ENST00000606690 KIF21AQ7Z4S6 1674 aa27.09■■□□□ 1.93
NECAB3-219ENST00000606690 RSF1Q96T23 1441 aaPredicted RBP26.99■■□□□ 1.91
NECAB3-219ENST00000606690 MRC2Q9UBG0 1479 aa26.96■■□□□ 1.91
NECAB3-219ENST00000606690 TOP2AP11388 1531 aaKnown RBP26.89■■□□□ 1.89
NECAB3-219ENST00000606690 CEP164Q9UPV0 1460 aa26.88■■□□□ 1.89
NECAB3-219ENST00000606690 WDR62O43379 1518 aa26.86■■□□□ 1.89
NECAB3-219ENST00000606690 FANCD2Q9BXW9 1451 aa26.84■■□□□ 1.89
NECAB3-219ENST00000606690 CFTRP13569 1480 aa26.83■■□□□ 1.89
NECAB3-219ENST00000606690 CCDC88BA6NC98 1476 aa26.56■■□□□ 1.84
NECAB3-219ENST00000606690 URB2Q14146 1524 aaKnown RBP26.56■■□□□ 1.84
NECAB3-219ENST00000606690 PRDM2Q13029 1718 aa26.49■■□□□ 1.83
NECAB3-219ENST00000606690 OSCARQ8IYS5 282 aa26.38■■□□□ 1.81
NECAB3-219ENST00000606690 TRIM41Q8WV44 630 aa26.37■■□□□ 1.81
NECAB3-219ENST00000606690 IFT140Q96RY7 1462 aa26.35■■□□□ 1.81
NECAB3-219ENST00000606690 ABCC8Q09428 1581 aa26.33■■□□□ 1.8
NECAB3-219ENST00000606690 TOPBP1Q92547 1522 aa26.31■■□□□ 1.8
NECAB3-219ENST00000606690 DNMBPQ6XZF7 1577 aa26.23■■□□□ 1.79
NECAB3-219ENST00000606690 ZNF608Q9ULD9 1512 aaPredicted RBP26.23■■□□□ 1.79
NECAB3-219ENST00000606690 EIF4G3O43432 1585 aaKnown RBP26.11■■□□□ 1.77
NECAB3-219ENST00000606690 POLA1P09884 1462 aaPredicted RBP26.05■■□□□ 1.76
NECAB3-219ENST00000606690 TARBP1Q13395 1621 aaKnown RBP26.03■■□□□ 1.76
NECAB3-219ENST00000606690 AQRO60306 1485 aaKnown RBP eCLIP26.02■■□□□ 1.762e-7■■■■■ 29.3
NECAB3-219ENST00000606690 SOGA1O94964 1423 aa25.97■■□□□ 1.75
NECAB3-219ENST00000606690 RAD54L2Q9Y4B4 1467 aa25.94■■□□□ 1.74
NECAB3-219ENST00000606690 RIMBP3CA6NJZ7 1639 aa25.94■■□□□ 1.74
NECAB3-219ENST00000606690 RIMBP3BA6NNM3 1639 aa25.94■■□□□ 1.74
NECAB3-219ENST00000606690 RIMBP3Q9UFD9 1639 aa25.94■■□□□ 1.74
NECAB3-219ENST00000606690 FBLN2P98095 1184 aa25.93■■□□□ 1.74
NECAB3-219ENST00000606690 FGD5Q6ZNL6 1462 aa25.91■■□□□ 1.74
NECAB3-219ENST00000606690 ARHGEF11O15085 1522 aa25.9■■□□□ 1.74
NECAB3-219ENST00000606690 SUPT5HO00267 1087 aaKnown RBP25.89■■□□□ 1.74
NECAB3-219ENST00000606690 TDRD9Q8NDG6 1382 aaKnown RBP25.89■■□□□ 1.74
NECAB3-219ENST00000606690 WDR97A6NE52 1622 aa25.85■■□□□ 1.73
NECAB3-219ENST00000606690 CUX1P39880 1505 aa25.85■■□□□ 1.73
NECAB3-219ENST00000606690 CHD1O14646 1710 aa25.85■■□□□ 1.73
NECAB3-219ENST00000606690 SNAPC4Q5SXM2 1469 aa25.79■■□□□ 1.72
NECAB3-219ENST00000606690 CYB5RLQ6IPT4 315 aa25.75■■□□□ 1.71
NECAB3-219ENST00000606690 GRIN2BQ13224 1484 aa25.74■■□□□ 1.71
NECAB3-219ENST00000606690 CHMP7Q8WUX9 453 aaPredicted RBP25.74■■□□□ 1.71
NECAB3-219ENST00000606690 MAGI1Q96QZ7 1491 aaPredicted RBP25.73■■□□□ 1.71
NECAB3-219ENST00000606690 SYNJ1O43426 1573 aa25.65■■□□□ 1.7
NECAB3-219ENST00000606690 SYNJ2O15056 1496 aa25.65■■□□□ 1.7
NECAB3-219ENST00000606690 GAPVD1Q14C86 1478 aa25.65■■□□□ 1.7
NECAB3-219ENST00000606690 ARAP1Q96P48 1450 aa25.64■■□□□ 1.69
NECAB3-219ENST00000606690 ABCA10Q8WWZ4 1543 aa25.61■■□□□ 1.69
NECAB3-219ENST00000606690 CLASP1Q7Z460 1538 aa25.59■■□□□ 1.69
NECAB3-219ENST00000606690 WRNQ14191 1432 aaPredicted RBP eCLIP25.57■■□□□ 1.686e-7■■■■■ 33.4
NECAB3-219ENST00000606690 PBRM1Q86U86 1689 aa25.56■■□□□ 1.68
NECAB3-219ENST00000606690 ABCA5Q8WWZ7 1642 aa25.54■■□□□ 1.68
NECAB3-219ENST00000606690 TRHP20396 242 aaPredicted RBP25.5■■□□□ 1.67
NECAB3-219ENST00000606690 TOP2BQ02880 1626 aa25.47■■□□□ 1.67
NECAB3-219ENST00000606690 BIVM-ERCC5R4GMW8 1640 aa25.45■■□□□ 1.67
NECAB3-219ENST00000606690 GRIN2AQ12879 1464 aa25.4■■□□□ 1.66
NECAB3-219ENST00000606690 ADAMTS12P58397 1594 aa25.36■■□□□ 1.65
NECAB3-219ENST00000606690 FHAD1B1AJZ9 1412 aa25.34■■□□□ 1.65
NECAB3-219ENST00000606690 ERICH3Q5RHP9 1530 aa25.31■■□□□ 1.64
NECAB3-219ENST00000606690 NUP160Q12769 1436 aa25.29■■□□□ 1.64
NECAB3-219ENST00000606690 CEP170Q5SW79 1584 aa25.26■■□□□ 1.63
NECAB3-219ENST00000606690 ERCC6L2Q5T890 1561 aa25.16■■□□□ 1.62
NECAB3-219ENST00000606690 SHROOM2Q13796 1616 aa25.13■■□□□ 1.61
NECAB3-219ENST00000606690 PRG4Q92954 1404 aaPredicted RBP25.07■■□□□ 1.6
NECAB3-219ENST00000606690 JPH4Q96JJ6 628 aa25.06■■□□□ 1.6
NECAB3-219ENST00000606690 KIF27Q86VH2 1401 aa25.04■■□□□ 1.6
NECAB3-219ENST00000606690 RUSC2Q8N2Y8 1516 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms