RNA–Protein interactions for RNA: ENST00000472216.2

SPC25-203, Transcript of SPC25, NDC80 kinetochore complex component, humanhuman

TSL 5

Gene SPC25, Length 754 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25-203ENST00000472216 DNAJC5BQ9UF47 199 aa26.68■■□□□ 1.86
SPC25-203ENST00000472216 ABCC9O60706 1549 aa26.44■■□□□ 1.82
SPC25-203ENST00000472216 NISCHQ9Y2I1 1504 aa26.23■■□□□ 1.79
SPC25-203ENST00000472216 DNAJC5Q9H3Z4 198 aa26.08■■□□□ 1.77
SPC25-203ENST00000472216 PABPN1Q86U42 306 aaKnown RBP eCLIP24.38■■□□□ 1.49
SPC25-203ENST00000472216 CCDC180Q9P1Z9 1646 aa24.33■■□□□ 1.49
SPC25-203ENST00000472216 RB1CC1Q8TDY2 1594 aa24.25■■□□□ 1.47
SPC25-203ENST00000472216 TRIM41Q8WV44 630 aa24.09■■□□□ 1.45
SPC25-203ENST00000472216 CECR2Q9BXF3 1484 aa24.07■■□□□ 1.44
SPC25-203ENST00000472216 CC2D2AQ9P2K1 1620 aa23.73■■□□□ 1.39
SPC25-203ENST00000472216 CUX2O14529 1486 aa23.66■■□□□ 1.38
SPC25-203ENST00000472216 NACADO15069 1562 aa23.59■■□□□ 1.37
SPC25-203ENST00000472216 AEBP2Q6ZN18 517 aaPredicted RBP23.56■■□□□ 1.36
SPC25-203ENST00000472216 BICRAQ9NZM4 1560 aa23.54■■□□□ 1.36
SPC25-203ENST00000472216 UNC13AQ9UPW8 1703 aa23.51■■□□□ 1.35
SPC25-203ENST00000472216 DCAF8L2P0C7V8 631 aa23.24■■□□□ 1.31
SPC25-203ENST00000472216 EIF4G1Q04637 1599 aaKnown RBP23.18■■□□□ 1.3
SPC25-203ENST00000472216 SHROOM4Q9ULL8 1493 aa23.11■■□□□ 1.29
SPC25-203ENST00000472216 ERCC6Q03468 1493 aa23.04■■□□□ 1.28
SPC25-203ENST00000472216 CHIC1Q5VXU3 224 aa22.97■■□□□ 1.27
SPC25-203ENST00000472216 ILDR1Q86SU0 546 aaPredicted RBP22.7■■□□□ 1.22
SPC25-203ENST00000472216 MYO15BQ96JP2 1530 aa22.6■■□□□ 1.21
SPC25-203ENST00000472216 TRHP20396 242 aaPredicted RBP22.43■■□□□ 1.18
SPC25-203ENST00000472216 OSCARQ8IYS5 282 aa22.37■■□□□ 1.17
SPC25-203ENST00000472216 SCRIBQ14160 1630 aa22.24■■□□□ 1.15
SPC25-203ENST00000472216 THOC2Q8NI27 1593 aaKnown RBP22.21■■□□□ 1.15
SPC25-203ENST00000472216 NESP48681 1621 aa22.09■■□□□ 1.13
SPC25-203ENST00000472216 RIMBP3CA6NJZ7 1639 aa22.09■■□□□ 1.13
SPC25-203ENST00000472216 RIMBP3BA6NNM3 1639 aa22.09■■□□□ 1.13
SPC25-203ENST00000472216 RIMBP3Q9UFD9 1639 aa22.09■■□□□ 1.13
SPC25-203ENST00000472216 BAZ1AQ9NRL2 1556 aaPredicted RBP22.08■■□□□ 1.12
SPC25-203ENST00000472216 CYB5RLQ6IPT4 315 aa21.97■■□□□ 1.11
SPC25-203ENST00000472216 SMARCA2P51531 1590 aa21.91■■□□□ 1.1
SPC25-203ENST00000472216 ARHGEF11O15085 1522 aa21.85■■□□□ 1.09
SPC25-203ENST00000472216 NCAPD3P42695 1498 aa21.85■■□□□ 1.09
SPC25-203ENST00000472216 PDS5BQ9NTI5 1447 aa21.68■■□□□ 1.06
SPC25-203ENST00000472216 KIF21AQ7Z4S6 1674 aa21.64■■□□□ 1.05
SPC25-203ENST00000472216 LAMC3Q9Y6N6 1575 aa21.63■■□□□ 1.05
SPC25-203ENST00000472216 MRC2Q9UBG0 1479 aa21.53■■□□□ 1.04
SPC25-203ENST00000472216 DCAF1Q9Y4B6 1507 aa21.53■■□□□ 1.04
SPC25-203ENST00000472216 WDR62O43379 1518 aa21.5■■□□□ 1.03
SPC25-203ENST00000472216 ARAP1Q96P48 1450 aa21.48■■□□□ 1.03
SPC25-203ENST00000472216 ATAD2BQ9ULI0 1458 aa21.46■■□□□ 1.03
SPC25-203ENST00000472216 HMGXB3Q12766 1538 aa21.42■■□□□ 1.02
SPC25-203ENST00000472216 LMTK3Q96Q04 1460 aa21.39■■□□□ 1.01
SPC25-203ENST00000472216 SOCS7O14512 581 aa21.38■■□□□ 1.01
SPC25-203ENST00000472216 FBXO41Q8TF61 875 aa21.34■■□□□ 1.01
SPC25-203ENST00000472216 ZCCHC6Q5VYS8 1495 aaKnown RBP21.26■□□□□ 0.99
SPC25-203ENST00000472216 KDM4FA0A1W2PPD8 638 aa21.24■□□□□ 0.99
SPC25-203ENST00000472216 BAZ1BQ9UIG0 1483 aaKnown RBP21.15■□□□□ 0.98
SPC25-203ENST00000472216 RSF1Q96T23 1441 aaPredicted RBP21.14■□□□□ 0.98
SPC25-203ENST00000472216 CADPSQ9ULU8 1353 aa21.12■□□□□ 0.97
SPC25-203ENST00000472216 ERCC6L2Q5T890 1561 aa21.08■□□□□ 0.97
SPC25-203ENST00000472216 ILDR2Q71H61 639 aa21.07■□□□□ 0.96
SPC25-203ENST00000472216 CEP164Q9UPV0 1460 aa21.04■□□□□ 0.96
SPC25-203ENST00000472216 DISP3Q9P2K9 1392 aa20.85■□□□□ 0.93
SPC25-203ENST00000472216 SMARCA4P51532 1647 aa20.85■□□□□ 0.93
SPC25-203ENST00000472216 ZNF608Q9ULD9 1512 aaPredicted RBP20.84■□□□□ 0.93
SPC25-203ENST00000472216 FANCD2Q9BXW9 1451 aa20.84■□□□□ 0.93
SPC25-203ENST00000472216 FBLN2P98095 1184 aa20.84■□□□□ 0.93
SPC25-203ENST00000472216 HECW2Q9P2P5 1572 aa20.84■□□□□ 0.93
SPC25-203ENST00000472216 CHD1O14646 1710 aa20.75■□□□□ 0.91
SPC25-203ENST00000472216 URB2Q14146 1524 aaKnown RBP20.74■□□□□ 0.91
SPC25-203ENST00000472216 IFT140Q96RY7 1462 aa20.72■□□□□ 0.91
SPC25-203ENST00000472216 SYNJ2O15056 1496 aa20.67■□□□□ 0.9
SPC25-203ENST00000472216 PEG3Q9GZU2 1588 aa20.67■□□□□ 0.9
SPC25-203ENST00000472216 GAPVD1Q14C86 1478 aa20.57■□□□□ 0.88
SPC25-203ENST00000472216 EIF4G3O43432 1585 aaKnown RBP20.55■□□□□ 0.88
SPC25-203ENST00000472216 CLASP1Q7Z460 1538 aa20.53■□□□□ 0.88
SPC25-203ENST00000472216 ADGRL1O94910 1474 aa20.5■□□□□ 0.87
SPC25-203ENST00000472216 KIF13AQ9H1H9 1805 aa20.48■□□□□ 0.87
SPC25-203ENST00000472216 AQRO60306 1485 aaKnown RBP eCLIP20.45■□□□□ 0.868e-7■■■■■ 28.7
SPC25-203ENST00000472216 KDM6BO15054 1643 aa20.43■□□□□ 0.86
SPC25-203ENST00000472216 FAM69CQ0P6D2 419 aa20.42■□□□□ 0.86
SPC25-203ENST00000472216 CFTRP13569 1480 aa20.4■□□□□ 0.86
SPC25-203ENST00000472216 SYNJ1O43426 1573 aa20.38■□□□□ 0.85
SPC25-203ENST00000472216 CHMP7Q8WUX9 453 aaPredicted RBP20.35■□□□□ 0.85
SPC25-203ENST00000472216 SPATA31D1Q6ZQQ2 1576 aa20.28■□□□□ 0.84
SPC25-203ENST00000472216 MROH2BQ7Z745 1585 aa20.26■□□□□ 0.83
SPC25-203ENST00000472216 ABCC10Q5T3U5 1492 aa20.24■□□□□ 0.83
SPC25-203ENST00000472216 PHF23Q9BUL5 403 aaPredicted RBP20.2■□□□□ 0.82
SPC25-203ENST00000472216 TOPBP1Q92547 1522 aa20.18■□□□□ 0.82
SPC25-203ENST00000472216 SNAPC4Q5SXM2 1469 aa20.13■□□□□ 0.81
SPC25-203ENST00000472216 CERKQ8TCT0 537 aa20.12■□□□□ 0.81
SPC25-203ENST00000472216 TARBP1Q13395 1621 aaKnown RBP20.1■□□□□ 0.81
SPC25-203ENST00000472216 ABCC8Q09428 1581 aa20.08■□□□□ 0.81
SPC25-203ENST00000472216 NPM1P06748 294 aaKnown RBP eCLIP20.06■□□□□ 0.8
SPC25-203ENST00000472216 TDRD9Q8NDG6 1382 aaKnown RBP20.03■□□□□ 0.8
SPC25-203ENST00000472216 DIP2BQ9P265 1576 aa20.03■□□□□ 0.8
SPC25-203ENST00000472216 MAGI1Q96QZ7 1491 aaPredicted RBP20.02■□□□□ 0.8
SPC25-203ENST00000472216 TSPOAP1O95153 1857 aa19.98■□□□□ 0.79
SPC25-203ENST00000472216 SENP3Q9H4L4 574 aaPredicted RBP19.97■□□□□ 0.79
SPC25-203ENST00000472216 TOP2BQ02880 1626 aa19.94■□□□□ 0.78
SPC25-203ENST00000472216 MAPKBP1O60336 1514 aa19.93■□□□□ 0.78
SPC25-203ENST00000472216 DNMBPQ6XZF7 1577 aa19.9■□□□□ 0.78
SPC25-203ENST00000472216 POLA1P09884 1462 aaPredicted RBP19.85■□□□□ 0.77
SPC25-203ENST00000472216 CEP170Q5SW79 1584 aa19.83■□□□□ 0.77
SPC25-203ENST00000472216 GRIN2BQ13224 1484 aa19.83■□□□□ 0.76
SPC25-203ENST00000472216 PRDM2Q13029 1718 aa19.82■□□□□ 0.76
SPC25-203ENST00000472216 RAD54L2Q9Y4B4 1467 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms