RNA–Protein interactions for RNA: ENST00000485399.5

NECAB3-211, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 1,373 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-211ENST00000485399 NISCHQ9Y2I1 1504 aa51.04■■■■■ 5.76
NECAB3-211ENST00000485399 CCDC180Q9P1Z9 1646 aa45.41■■■■■ 4.86
NECAB3-211ENST00000485399 ABCC9O60706 1549 aa45.39■■■■■ 4.86
NECAB3-211ENST00000485399 RB1CC1Q8TDY2 1594 aa43.2■■■■■ 4.51
NECAB3-211ENST00000485399 NACADO15069 1562 aa42.91■■■■■ 4.46
NECAB3-211ENST00000485399 ZCCHC6Q5VYS8 1495 aaKnown RBP42.71■■■■■ 4.43
NECAB3-211ENST00000485399 DNAJC5BQ9UF47 199 aa42.65■■■■■ 4.42
NECAB3-211ENST00000485399 DCAF8L2P0C7V8 631 aa42.51■■■■■ 4.4
NECAB3-211ENST00000485399 MYO15BQ96JP2 1530 aa42.34■■■■■ 4.37
NECAB3-211ENST00000485399 UNC13AQ9UPW8 1703 aa42.33■■■■■ 4.37
NECAB3-211ENST00000485399 DCAF1Q9Y4B6 1507 aa42.29■■■■■ 4.36
NECAB3-211ENST00000485399 PABPN1Q86U42 306 aaKnown RBP eCLIP42.21■■■■■ 4.358e-8■■□□□ 11.7
NECAB3-211ENST00000485399 BICRAQ9NZM4 1560 aa42.03■■■■■ 4.32
NECAB3-211ENST00000485399 SHROOM4Q9ULL8 1493 aa41.41■■■■■ 4.22
NECAB3-211ENST00000485399 SCRIBQ14160 1630 aa41.34■■■■■ 4.21
NECAB3-211ENST00000485399 CC2D2AQ9P2K1 1620 aa41.04■■■■■ 4.16
NECAB3-211ENST00000485399 EIF4G1Q04637 1599 aaKnown RBP40.95■■■■■ 4.15
NECAB3-211ENST00000485399 CECR2Q9BXF3 1484 aa40.89■■■■■ 4.14
NECAB3-211ENST00000485399 NCAPD3P42695 1498 aa39.62■■■■□ 3.93
NECAB3-211ENST00000485399 BAZ1AQ9NRL2 1556 aaPredicted RBP39.51■■■■□ 3.92
NECAB3-211ENST00000485399 ATAD2BQ9ULI0 1458 aa39.49■■■■□ 3.91
NECAB3-211ENST00000485399 SMARCA4P51532 1647 aa39.46■■■■□ 3.91
NECAB3-211ENST00000485399 SMARCA2P51531 1590 aa39.36■■■■□ 3.89
NECAB3-211ENST00000485399 MROH2BQ7Z745 1585 aa39.34■■■■□ 3.89
NECAB3-211ENST00000485399 HMGXB3Q12766 1538 aa39.34■■■■□ 3.89
NECAB3-211ENST00000485399 RSF1Q96T23 1441 aaPredicted RBP39.23■■■■□ 3.87
NECAB3-211ENST00000485399 DNAJC5Q9H3Z4 198 aa39.16■■■■□ 3.86
NECAB3-211ENST00000485399 CUX2O14529 1486 aa39.16■■■■□ 3.86
NECAB3-211ENST00000485399 ERCC6Q03468 1493 aa39.15■■■■□ 3.86
NECAB3-211ENST00000485399 PEG3Q9GZU2 1588 aa39.11■■■■□ 3.85
NECAB3-211ENST00000485399 BAZ1BQ9UIG0 1483 aaKnown RBP39.08■■■■□ 3.85
NECAB3-211ENST00000485399 NESP48681 1621 aa39.01■■■■□ 3.84
NECAB3-211ENST00000485399 WIZO95785 1651 aa38.99■■■■□ 3.83
NECAB3-211ENST00000485399 SUPT5HO00267 1087 aaKnown RBP38.97■■■■□ 3.83
NECAB3-211ENST00000485399 LAMC3Q9Y6N6 1575 aa38.73■■■■□ 3.79
NECAB3-211ENST00000485399 THOC2Q8NI27 1593 aaKnown RBP38.67■■■■□ 3.78
NECAB3-211ENST00000485399 TOP2AP11388 1531 aaKnown RBP38.62■■■■□ 3.77
NECAB3-211ENST00000485399 KIF21AQ7Z4S6 1674 aa38.54■■■■□ 3.76
NECAB3-211ENST00000485399 PDS5BQ9NTI5 1447 aa38.46■■■■□ 3.75
NECAB3-211ENST00000485399 CADPSQ9ULU8 1353 aa38.37■■■■□ 3.73
NECAB3-211ENST00000485399 CCDC88BA6NC98 1476 aa38.17■■■■□ 3.7
NECAB3-211ENST00000485399 MRC2Q9UBG0 1479 aa38.15■■■■□ 3.7
NECAB3-211ENST00000485399 WDR62O43379 1518 aa38.11■■■■□ 3.69
NECAB3-211ENST00000485399 CEP164Q9UPV0 1460 aa37.99■■■■□ 3.67
NECAB3-211ENST00000485399 CFTRP13569 1480 aa37.97■■■■□ 3.67
NECAB3-211ENST00000485399 FANCD2Q9BXW9 1451 aa37.95■■■■□ 3.67
NECAB3-211ENST00000485399 URB2Q14146 1524 aaKnown RBP37.69■■■■□ 3.62
NECAB3-211ENST00000485399 PRDM2Q13029 1718 aa37.63■■■■□ 3.61
NECAB3-211ENST00000485399 TRIM41Q8WV44 630 aa37.34■■■■□ 3.57
NECAB3-211ENST00000485399 OSCARQ8IYS5 282 aa37.28■■■■□ 3.56
NECAB3-211ENST00000485399 TOPBP1Q92547 1522 aa37.25■■■■□ 3.55
NECAB3-211ENST00000485399 IFT140Q96RY7 1462 aa37.23■■■■□ 3.55
NECAB3-211ENST00000485399 ZNF608Q9ULD9 1512 aaPredicted RBP37.21■■■■□ 3.55
NECAB3-211ENST00000485399 ABCC8Q09428 1581 aa37.12■■■■□ 3.53
NECAB3-211ENST00000485399 DNMBPQ6XZF7 1577 aa37.11■■■■□ 3.53
NECAB3-211ENST00000485399 EIF4G3O43432 1585 aaKnown RBP37.02■■■■□ 3.52
NECAB3-211ENST00000485399 WRNQ14191 1432 aaPredicted RBP eCLIP36.99■■■■□ 3.516e-7■■■■■ 33.4
NECAB3-211ENST00000485399 TARBP1Q13395 1621 aaKnown RBP36.97■■■■□ 3.51
NECAB3-211ENST00000485399 CHIC1Q5VXU3 224 aa36.92■■■■□ 3.5
NECAB3-211ENST00000485399 RIMBP3CA6NJZ7 1639 aa36.91■■■■□ 3.5
NECAB3-211ENST00000485399 RIMBP3BA6NNM3 1639 aa36.91■■■■□ 3.5
NECAB3-211ENST00000485399 RIMBP3Q9UFD9 1639 aa36.91■■■■□ 3.5
NECAB3-211ENST00000485399 POLA1P09884 1462 aaPredicted RBP36.87■■■■□ 3.49
NECAB3-211ENST00000485399 CUX1P39880 1505 aa36.86■■■■□ 3.49
NECAB3-211ENST00000485399 AQRO60306 1485 aaKnown RBP eCLIP36.84■■■■□ 3.492e-7■■■■■ 29.3
NECAB3-211ENST00000485399 SYNJ1O43426 1573 aa36.83■■■■□ 3.49
NECAB3-211ENST00000485399 TOP2BQ02880 1626 aa36.81■■■■□ 3.48
NECAB3-211ENST00000485399 BIVM-ERCC5R4GMW8 1640 aa36.8■■■■□ 3.48
NECAB3-211ENST00000485399 ARHGEF11O15085 1522 aa36.77■■■■□ 3.48
NECAB3-211ENST00000485399 CHD1O14646 1710 aa36.76■■■■□ 3.47
NECAB3-211ENST00000485399 RAD54L2Q9Y4B4 1467 aa36.72■■■■□ 3.47
NECAB3-211ENST00000485399 SOGA1O94964 1423 aa36.65■■■■□ 3.46
NECAB3-211ENST00000485399 FGD5Q6ZNL6 1462 aa36.61■■■■□ 3.45
NECAB3-211ENST00000485399 TDRD9Q8NDG6 1382 aaKnown RBP36.59■■■■□ 3.45
NECAB3-211ENST00000485399 WDR97A6NE52 1622 aa36.56■■■■□ 3.44
NECAB3-211ENST00000485399 FBLN2P98095 1184 aa36.5■■■■□ 3.43
NECAB3-211ENST00000485399 SNAPC4Q5SXM2 1469 aa36.47■■■■□ 3.43
NECAB3-211ENST00000485399 ARAP1Q96P48 1450 aa36.42■■■■□ 3.42
NECAB3-211ENST00000485399 CYB5RLQ6IPT4 315 aa36.41■■■■□ 3.42
NECAB3-211ENST00000485399 MAGI1Q96QZ7 1491 aaPredicted RBP36.37■■■■□ 3.41
NECAB3-211ENST00000485399 CLASP1Q7Z460 1538 aa36.35■■■■□ 3.41
NECAB3-211ENST00000485399 GRIN2BQ13224 1484 aa36.35■■■■□ 3.41
NECAB3-211ENST00000485399 ABCA10Q8WWZ4 1543 aa36.29■■■■□ 3.4
NECAB3-211ENST00000485399 PBRM1Q86U86 1689 aa36.27■■■■□ 3.4
NECAB3-211ENST00000485399 SYNJ2O15056 1496 aa36.25■■■■□ 3.39
NECAB3-211ENST00000485399 CHMP7Q8WUX9 453 aaPredicted RBP36.25■■■■□ 3.39
NECAB3-211ENST00000485399 GAPVD1Q14C86 1478 aa36.22■■■■□ 3.39
NECAB3-211ENST00000485399 ABCA5Q8WWZ7 1642 aa36.2■■■■□ 3.39
NECAB3-211ENST00000485399 KIF27Q86VH2 1401 aa36.16■■■■□ 3.38
NECAB3-211ENST00000485399 EEA1Q15075 1411 aa36.11■■■■□ 3.37
NECAB3-211ENST00000485399 RUSC2Q8N2Y8 1516 aa36.08■■■■□ 3.37
NECAB3-211ENST00000485399 FAM9AQ8IZU1 332 aaPredicted RBP35.99■■■■□ 3.35
NECAB3-211ENST00000485399 TRHP20396 242 aaPredicted RBP35.97■■■■□ 3.35
NECAB3-211ENST00000485399 ADAMTS12P58397 1594 aa35.92■■■■□ 3.34
NECAB3-211ENST00000485399 CSRNP3Q8WYN3 585 aa35.91■■■■□ 3.34
NECAB3-211ENST00000485399 GRIN2AQ12879 1464 aa35.91■■■■□ 3.34
NECAB3-211ENST00000485399 ERICH3Q5RHP9 1530 aa35.89■■■■□ 3.34
NECAB3-211ENST00000485399 IGF1RP08069 1367 aa35.87■■■■□ 3.33
NECAB3-211ENST00000485399 CEP170Q5SW79 1584 aa35.81■■■■□ 3.32
NECAB3-211ENST00000485399 NUP160Q12769 1436 aa35.81■■■■□ 3.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms