RNA–Protein interactions for RNA: ENST00000451987.5

SPC25-202, Transcript of SPC25, NDC80 kinetochore complex component, humanhuman

TSL 3

Gene SPC25, Length 596 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25-202ENST00000451987 AEBP2Q6ZN18 517 aaPredicted RBP18.55■□□□□ 0.56
SPC25-202ENST00000451987 CHIC1Q5VXU3 224 aa17.3■□□□□ 0.36
SPC25-202ENST00000451987 POTEDQ86YR6 584 aa16.06■□□□□ 0.16
SPC25-202ENST00000451987 SENP3Q9H4L4 574 aaPredicted RBP16■□□□□ 0.15
SPC25-202ENST00000451987 PHF23Q9BUL5 403 aaPredicted RBP15.64■□□□□ 0.09
SPC25-202ENST00000451987 FOXD1Q16676 465 aa15.05■□□□□ -0
SPC25-202ENST00000451987 MSH5O43196 834 aa14.52□□□□□ -0.09
SPC25-202ENST00000451987 PIAS4Q8N2W9 510 aaPredicted RBP13.77□□□□□ -0.21
SPC25-202ENST00000451987 PPP6R1Q9UPN7 881 aa13.22□□□□□ -0.29
SPC25-202ENST00000451987 CACNB1Q02641 598 aaPredicted RBP13.12□□□□□ -0.31
SPC25-202ENST00000451987 ADRA2BP18089 450 aa13.09□□□□□ -0.31
SPC25-202ENST00000451987 PLPPR3Q6T4P5 718 aa12.71□□□□□ -0.37
SPC25-202ENST00000451987 DMRT2Q9Y5R5 561 aa12.52□□□□□ -0.41
SPC25-202ENST00000451987 MAPK8IP2Q13387 824 aaPredicted RBP12.37□□□□□ -0.43
SPC25-202ENST00000451987 POTEHQ6S545 545 aa12.36□□□□□ -0.43
SPC25-202ENST00000451987 RNF39Q9H2S5 420 aa12.29□□□□□ -0.44
SPC25-202ENST00000451987 C1QBPQ07021 282 aaKnown RBP12.05□□□□□ -0.48
SPC25-202ENST00000451987 DCAF8L1A6NGE4 600 aa12.01□□□□□ -0.49
SPC25-202ENST00000451987 SCAF1Q9H7N4 1312 aaKnown RBP11.99□□□□□ -0.49
SPC25-202ENST00000451987 HOXD11P31277 338 aaPredicted RBP11.63□□□□□ -0.55
SPC25-202ENST00000451987 DNAJC5BQ9UF47 199 aa11.49□□□□□ -0.57
SPC25-202ENST00000451987 RNF216Q9NWF9 866 aaPredicted RBP11.24□□□□□ -0.61
SPC25-202ENST00000451987 DSG3P32926 999 aa11.13□□□□□ -0.63
SPC25-202ENST00000451987 SP7Q8TDD2 431 aaPredicted RBP11.07□□□□□ -0.64
SPC25-202ENST00000451987 CNKSR2Q8WXI2 1034 aa11.05□□□□□ -0.64
SPC25-202ENST00000451987 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.05□□□□□ -0.64
SPC25-202ENST00000451987 PPP4R3CPQ6ZMV5 832 aa11.03□□□□□ -0.64
SPC25-202ENST00000451987 CAPN15O75808 1086 aa10.89□□□□□ -0.67
SPC25-202ENST00000451987 SPINK5Q9NQ38 1064 aaPredicted RBP10.87□□□□□ -0.67
SPC25-202ENST00000451987 CHRDL2Q6WN34 429 aa10.85□□□□□ -0.67
SPC25-202ENST00000451987 U3KPZ7 1027 aaPredicted RBP10.7□□□□□ -0.7
SPC25-202ENST00000451987 RBM42Q9BTD8 480 aaKnown RBP10.64□□□□□ -0.71
SPC25-202ENST00000451987 PLSCR2Q9NRY7 297 aa10.62□□□□□ -0.71
SPC25-202ENST00000451987 ABCB7O75027 752 aa10.54□□□□□ -0.72
SPC25-202ENST00000451987 HAX1O00165 279 aa10.45□□□□□ -0.74
SPC25-202ENST00000451987 TRHP20396 242 aaPredicted RBP10.45□□□□□ -0.74
SPC25-202ENST00000451987 ZNF219Q9P2Y4 722 aaPredicted RBP10.41□□□□□ -0.74
SPC25-202ENST00000451987 NPM3O75607 178 aaKnown RBP10.4□□□□□ -0.74
SPC25-202ENST00000451987 NCBP3Q53F19 620 aaKnown RBP10.38□□□□□ -0.75
SPC25-202ENST00000451987 LHX8Q68G74 356 aa10.36□□□□□ -0.75
SPC25-202ENST00000451987 PIP4P2Q8N4L2 257 aa10.35□□□□□ -0.75
SPC25-202ENST00000451987 APLP2Q06481 763 aa10.28□□□□□ -0.76
SPC25-202ENST00000451987 EVX2Q03828 476 aa10.26□□□□□ -0.77
SPC25-202ENST00000451987 AKT1S1Q96B36 256 aa10.16□□□□□ -0.78
SPC25-202ENST00000451987 FXR2P51116 673 aaKnown RBP eCLIP10.13□□□□□ -0.79
SPC25-202ENST00000451987 REM2Q8IYK8 340 aaPredicted RBP10.07□□□□□ -0.8
SPC25-202ENST00000451987 SLC4A2P04920 1241 aa10.06□□□□□ -0.8
SPC25-202ENST00000451987 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.02□□□□□ -0.81
SPC25-202ENST00000451987 HNRNPUL2Q1KMD3 747 aaKnown RBP10.02□□□□□ -0.81
SPC25-202ENST00000451987 KCNA4P22459 653 aa9.97□□□□□ -0.81
SPC25-202ENST00000451987 PITPNM1O00562 1244 aa9.96□□□□□ -0.82
SPC25-202ENST00000451987 GABBR2O75899 941 aa9.96□□□□□ -0.82
SPC25-202ENST00000451987 POLA2Q14181 598 aa9.93□□□□□ -0.82
SPC25-202ENST00000451987 SAMD1Q6SPF0 538 aaPredicted RBP9.91□□□□□ -0.82
SPC25-202ENST00000451987 C19orf67A6NJJ6 358 aa9.84□□□□□ -0.83
SPC25-202ENST00000451987 POTEMA6NI47 508 aa9.81□□□□□ -0.84
SPC25-202ENST00000451987 POTEIP0CG38 1075 aa9.75□□□□□ -0.85
SPC25-202ENST00000451987 PCDH10Q9P2E7 1040 aa9.75□□□□□ -0.85
SPC25-202ENST00000451987 POTEGQ6S5H5 508 aa9.74□□□□□ -0.85
SPC25-202ENST00000451987 PRKAR2AP13861 404 aaKnown RBP9.69□□□□□ -0.86
SPC25-202ENST00000451987 OSCARQ8IYS5 282 aa9.65□□□□□ -0.86
SPC25-202ENST00000451987 ZBTB12Q9Y330 459 aaPredicted RBP9.65□□□□□ -0.86
SPC25-202ENST00000451987 OTUD5Q96G74 571 aa9.6□□□□□ -0.87
SPC25-202ENST00000451987 MYCNP04198 464 aaPredicted RBP9.53□□□□□ -0.88
SPC25-202ENST00000451987 ATF5Q9Y2D1 282 aaPredicted RBP9.52□□□□□ -0.89
SPC25-202ENST00000451987 CLCN6P51797 869 aa9.45□□□□□ -0.9
SPC25-202ENST00000451987 DCBLD2Q96PD2 775 aa9.44□□□□□ -0.9
SPC25-202ENST00000451987 POTEB2H3BUK9 544 aa9.4□□□□□ -0.9
SPC25-202ENST00000451987 CLEC11AQ9Y240 323 aa9.39□□□□□ -0.91
SPC25-202ENST00000451987 SPDYE1Q8NFV5 336 aaPredicted RBP9.37□□□□□ -0.91
SPC25-202ENST00000451987 CHADLQ6NUI6 762 aa9.33□□□□□ -0.92
SPC25-202ENST00000451987 CD44P16070 742 aaKnown RBP9.31□□□□□ -0.92
SPC25-202ENST00000451987 LCE2DQ5TA82 110 aaPredicted RBP9.31□□□□□ -0.92
SPC25-202ENST00000451987 FOXD4L1Q9NU39 408 aa9.3□□□□□ -0.92
SPC25-202ENST00000451987 SPDYE2BA6NHP3 402 aa9.27□□□□□ -0.93
SPC25-202ENST00000451987 SPDYE6P0CI01 402 aa9.27□□□□□ -0.93
SPC25-202ENST00000451987 SPDYE2Q495Y8 402 aa9.27□□□□□ -0.93
SPC25-202ENST00000451987 SLC4A1APQ9BWU0 796 aaKnown RBP9.26□□□□□ -0.93
SPC25-202ENST00000451987 ZBTB22O15209 634 aa9.23□□□□□ -0.93
SPC25-202ENST00000451987 FAM163AQ96GL9 167 aaPredicted RBP9.19□□□□□ -0.94
SPC25-202ENST00000451987 CDAN1Q8IWY9 1227 aa9.14□□□□□ -0.95
SPC25-202ENST00000451987 ZNF579Q8NAF0 562 aaKnown RBP9.14□□□□□ -0.95
SPC25-202ENST00000451987 FARP1Q9Y4F1 1045 aaPredicted RBP9.1□□□□□ -0.95
SPC25-202ENST00000451987 GALR2O43603 387 aaPredicted RBP9.09□□□□□ -0.95
SPC25-202ENST00000451987 PRR29P0C7W0 189 aa9.09□□□□□ -0.95
SPC25-202ENST00000451987 POTEJP0CG39 1038 aa9.08□□□□□ -0.96
SPC25-202ENST00000451987 MAMSTRQ6ZN01 415 aa9.08□□□□□ -0.96
SPC25-202ENST00000451987 MMRN1Q13201 1228 aa9.05□□□□□ -0.96
SPC25-202ENST00000451987 MKRN4PQ13434 485 aaPredicted RBP9.04□□□□□ -0.96
SPC25-202ENST00000451987 PELP1Q8IZL8 1130 aaKnown RBP9.03□□□□□ -0.96
SPC25-202ENST00000451987 SSUH2Q9Y2M2 353 aa9.03□□□□□ -0.96
SPC25-202ENST00000451987 ZRANB1Q9UGI0 708 aa9.01□□□□□ -0.97
SPC25-202ENST00000451987 ATXN8OSP0DMR3 200 aa8.96□□□□□ -0.98
SPC25-202ENST00000451987 ZNF692Q9BU19 519 aaPredicted RBP8.96□□□□□ -0.98
SPC25-202ENST00000451987 METRNQ9UJH8 293 aa8.96□□□□□ -0.98
SPC25-202ENST00000451987 SPNS2Q8IVW8 549 aa8.95□□□□□ -0.98
SPC25-202ENST00000451987 SCUBE2Q9NQ36 999 aa8.94□□□□□ -0.98
SPC25-202ENST00000451987 FBLN2P98095 1184 aa8.93□□□□□ -0.98
SPC25-202ENST00000451987 C7P10643 843 aa8.91□□□□□ -0.98
SPC25-202ENST00000451987 SLC39A7Q92504 469 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 136.8 ms