Protein–RNA interactions for Protein: P18545

PDE6G, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma, humanhuman

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6GP18545 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PDE6GP18545 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PDE6GP18545 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PDE6GP18545 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PDE6GP18545 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
PDE6GP18545 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC12.42□□□□□ -0.42
PDE6GP18545 RBM38-205ENST00000440234 686 ntTSL 2 BASIC12.42□□□□□ -0.42
PDE6GP18545 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC12.42□□□□□ -0.42
PDE6GP18545 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC12.42□□□□□ -0.42
PDE6GP18545 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC12.42□□□□□ -0.42
PDE6GP18545 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC12.42□□□□□ -0.42
PDE6GP18545 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
PDE6GP18545 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PDE6GP18545 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
PDE6GP18545 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
PDE6GP18545 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PDE6GP18545 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
PDE6GP18545 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
PDE6GP18545 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC12.42□□□□□ -0.42
PDE6GP18545 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
PDE6GP18545 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC12.42□□□□□ -0.42
PDE6GP18545 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC12.42□□□□□ -0.42
PDE6GP18545 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC12.42□□□□□ -0.42
PDE6GP18545 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PDE6GP18545 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC12.41□□□□□ -0.42
PDE6GP18545 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PDE6GP18545 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC12.41□□□□□ -0.42
PDE6GP18545 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PDE6GP18545 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
PDE6GP18545 AL049812.1-201ENST00000432563 2267 ntBASIC12.41□□□□□ -0.42
PDE6GP18545 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PDE6GP18545 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC12.41□□□□□ -0.42
PDE6GP18545 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PDE6GP18545 OR6D1P-203ENST00000641209 4860 ntBASIC12.41□□□□□ -0.42
PDE6GP18545 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PDE6GP18545 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC12.41□□□□□ -0.42
PDE6GP18545 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
PDE6GP18545 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC12.41□□□□□ -0.42
PDE6GP18545 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PDE6GP18545 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PDE6GP18545 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PDE6GP18545 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PDE6GP18545 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC12.41□□□□□ -0.42
PDE6GP18545 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
PDE6GP18545 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC12.41□□□□□ -0.42
PDE6GP18545 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
PDE6GP18545 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PDE6GP18545 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PDE6GP18545 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
PDE6GP18545 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
PDE6GP18545 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
PDE6GP18545 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PDE6GP18545 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
PDE6GP18545 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
PDE6GP18545 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
PDE6GP18545 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC12.4□□□□□ -0.42
PDE6GP18545 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
PDE6GP18545 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC12.4□□□□□ -0.42
PDE6GP18545 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
PDE6GP18545 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC12.4□□□□□ -0.42
PDE6GP18545 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PDE6GP18545 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
PDE6GP18545 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC12.4□□□□□ -0.42
PDE6GP18545 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PDE6GP18545 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PDE6GP18545 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PDE6GP18545 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC12.4□□□□□ -0.42
PDE6GP18545 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC12.4□□□□□ -0.42
PDE6GP18545 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC12.4□□□□□ -0.42
PDE6GP18545 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
PDE6GP18545 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
PDE6GP18545 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
PDE6GP18545 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PDE6GP18545 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PDE6GP18545 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC12.4□□□□□ -0.42
PDE6GP18545 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC12.4□□□□□ -0.42
PDE6GP18545 LTB4R2-202ENST00000528054 3092 ntBASIC12.4□□□□□ -0.42
PDE6GP18545 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
PDE6GP18545 VGF-203ENST00000611537 1622 ntTSL 5 BASIC12.4□□□□□ -0.42
PDE6GP18545 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
PDE6GP18545 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC12.4□□□□□ -0.42
PDE6GP18545 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
PDE6GP18545 PTGES2-AS1-201ENST00000443493 2100 ntBASIC12.4□□□□□ -0.43
PDE6GP18545 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
PDE6GP18545 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.43
PDE6GP18545 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC12.39□□□□□ -0.43
PDE6GP18545 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PDE6GP18545 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC12.39□□□□□ -0.43
PDE6GP18545 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PDE6GP18545 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PDE6GP18545 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PDE6GP18545 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC12.39□□□□□ -0.43
PDE6GP18545 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
PDE6GP18545 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PDE6GP18545 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC12.39□□□□□ -0.43
PDE6GP18545 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PDE6GP18545 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PDE6GP18545 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PDE6GP18545 AC010141.3-201ENST00000456659 717 ntBASIC12.39□□□□□ -0.43
PDE6GP18545 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms