RNA–Protein interactions for RNA: ENST00000538422.2

LRCH2-202, Transcript of leucine rich repeats and calponin homology domain containing 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRCH2, Length 4,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH2-202ENST00000538422 NISCHQ9Y2I1 1504 aa33.93■■■■□ 3.02
LRCH2-202ENST00000538422 DCAF8L2P0C7V8 631 aa32.66■■■□□ 2.82
LRCH2-202ENST00000538422 SHROOM4Q9ULL8 1493 aa30.72■■■□□ 2.51
LRCH2-202ENST00000538422 SUPT5HO00267 1087 aaKnown RBP30.59■■■□□ 2.49
LRCH2-202ENST00000538422 ABCC9O60706 1549 aa29.16■■■□□ 2.26
LRCH2-202ENST00000538422 EHMT2Q96KQ7 1210 aa28.93■■■□□ 2.22
LRCH2-202ENST00000538422 FAM9AQ8IZU1 332 aaPredicted RBP28.65■■■□□ 2.18
LRCH2-202ENST00000538422 TRIM41Q8WV44 630 aa28.53■■■□□ 2.16
LRCH2-202ENST00000538422 CCDC180Q9P1Z9 1646 aa28.47■■■□□ 2.15
LRCH2-202ENST00000538422 PABPN1Q86U42 306 aaKnown RBP eCLIP28.44■■■□□ 2.14
LRCH2-202ENST00000538422 APLP2Q06481 763 aa28.32■■■□□ 2.12
LRCH2-202ENST00000538422 ZCCHC6Q5VYS8 1495 aaKnown RBP28.16■■■□□ 2.1
LRCH2-202ENST00000538422 RANGAP1P46060 587 aaPredicted RBP28.01■■■□□ 2.07
LRCH2-202ENST00000538422 UBTFP17480 764 aaKnown RBP27.95■■■□□ 2.07
LRCH2-202ENST00000538422 TTBK1Q5TCY1 1321 aaPredicted RBP27.79■■■□□ 2.04
LRCH2-202ENST00000538422 SCRIBQ14160 1630 aa27.78■■■□□ 2.04
LRCH2-202ENST00000538422 ATP1B4Q9UN42 357 aaPredicted RBP27.7■■■□□ 2.02
LRCH2-202ENST00000538422 CHIC1Q5VXU3 224 aa27.69■■■□□ 2.02
LRCH2-202ENST00000538422 RB1CC1Q8TDY2 1594 aa27.6■■■□□ 2.01
LRCH2-202ENST00000538422 PCGF6Q9BYE7 350 aa27.47■■□□□ 1.99
LRCH2-202ENST00000538422 NACADO15069 1562 aa27.46■■□□□ 1.99
LRCH2-202ENST00000538422 LOC105371045A0A1W2PR82 267 aa27.26■■□□□ 1.95
LRCH2-202ENST00000538422 DCAF1Q9Y4B6 1507 aa27.18■■□□□ 1.94
LRCH2-202ENST00000538422 PPARGC1BQ86YN6 1023 aaKnown RBP27.09■■□□□ 1.93
LRCH2-202ENST00000538422 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.03■■□□□ 1.92
LRCH2-202ENST00000538422 HNRNPUL2Q1KMD3 747 aaKnown RBP27.03■■□□□ 1.92
LRCH2-202ENST00000538422 CCER1Q8TC90 406 aaPredicted RBP26.98■■□□□ 1.91
LRCH2-202ENST00000538422 RSF1Q96T23 1441 aaPredicted RBP26.81■■□□□ 1.88
LRCH2-202ENST00000538422 ZEB1P37275 1124 aaPredicted RBP26.81■■□□□ 1.88
LRCH2-202ENST00000538422 TRIM26Q12899 539 aaPredicted RBP26.8■■□□□ 1.88
LRCH2-202ENST00000538422 FBLN2P98095 1184 aa26.75■■□□□ 1.87
LRCH2-202ENST00000538422 CSRNP3Q8WYN3 585 aa26.71■■□□□ 1.87
LRCH2-202ENST00000538422 ITGAEP38570 1179 aa26.69■■□□□ 1.86
LRCH2-202ENST00000538422 MYO15BQ96JP2 1530 aa26.64■■□□□ 1.86
LRCH2-202ENST00000538422 MYT1LQ9UL68 1186 aa26.61■■□□□ 1.85
LRCH2-202ENST00000538422 BAZ1BQ9UIG0 1483 aaKnown RBP26.6■■□□□ 1.85
LRCH2-202ENST00000538422 BAZ1AQ9NRL2 1556 aaPredicted RBP26.6■■□□□ 1.85
LRCH2-202ENST00000538422 CECR2Q9BXF3 1484 aa26.55■■□□□ 1.84
LRCH2-202ENST00000538422 P3H3Q8IVL6 736 aa26.34■■□□□ 1.81
LRCH2-202ENST00000538422 FAM50AQ14320 339 aaKnown RBP26.3■■□□□ 1.8
LRCH2-202ENST00000538422 MROH2BQ7Z745 1585 aa26.23■■□□□ 1.79
LRCH2-202ENST00000538422 WRNQ14191 1432 aaPredicted RBP eCLIP26.17■■□□□ 1.78
LRCH2-202ENST00000538422 ARID3CA6NKF2 412 aa26.12■■□□□ 1.77
LRCH2-202ENST00000538422 SMARCA2P51531 1590 aa26.11■■□□□ 1.77
LRCH2-202ENST00000538422 CHMP7Q8WUX9 453 aaPredicted RBP26.04■■□□□ 1.76
LRCH2-202ENST00000538422 CDK11AQ9UQ88 783 aaPredicted RBP26.03■■□□□ 1.76
LRCH2-202ENST00000538422 EEA1Q15075 1411 aa25.99■■□□□ 1.75
LRCH2-202ENST00000538422 ERCC6Q03468 1493 aa25.99■■□□□ 1.75
LRCH2-202ENST00000538422 TRIM52Q96A61 297 aa25.97■■□□□ 1.75
LRCH2-202ENST00000538422 HRCP23327 699 aa25.96■■□□□ 1.75
LRCH2-202ENST00000538422 PELP1Q8IZL8 1130 aaKnown RBP25.93■■□□□ 1.74
LRCH2-202ENST00000538422 CCDC88BA6NC98 1476 aa25.93■■□□□ 1.74
LRCH2-202ENST00000538422 KIF27Q86VH2 1401 aa25.9■■□□□ 1.74
LRCH2-202ENST00000538422 CENPBP07199 599 aaPredicted RBP25.84■■□□□ 1.73
LRCH2-202ENST00000538422 ATAD2BQ9ULI0 1458 aa25.83■■□□□ 1.73
LRCH2-202ENST00000538422 WIZO95785 1651 aa25.82■■□□□ 1.72
LRCH2-202ENST00000538422 NPM1P06748 294 aaKnown RBP eCLIP25.82■■□□□ 1.72
LRCH2-202ENST00000538422 ZNF777Q9ULD5 760 aaPredicted RBP25.81■■□□□ 1.72
LRCH2-202ENST00000538422 TOP2AP11388 1531 aaKnown RBP25.8■■□□□ 1.72
LRCH2-202ENST00000538422 POLR3GLQ9BT43 218 aa25.79■■□□□ 1.72
LRCH2-202ENST00000538422 SMARCA4P51532 1647 aa25.78■■□□□ 1.72
LRCH2-202ENST00000538422 GOLGA3Q08378 1498 aa25.77■■□□□ 1.72
LRCH2-202ENST00000538422 CLIP1P30622 1438 aa25.76■■□□□ 1.71
LRCH2-202ENST00000538422 PDS5BQ9NTI5 1447 aa25.75■■□□□ 1.71
LRCH2-202ENST00000538422 NEUROD1Q13562 356 aa25.67■■□□□ 1.7
LRCH2-202ENST00000538422 CADPSQ9ULU8 1353 aa25.66■■□□□ 1.7
LRCH2-202ENST00000538422 CEP164Q9UPV0 1460 aa25.64■■□□□ 1.7
LRCH2-202ENST00000538422 CUX2O14529 1486 aa25.61■■□□□ 1.69
LRCH2-202ENST00000538422 MTUS2Q5JR59 1369 aa25.58■■□□□ 1.69
LRCH2-202ENST00000538422 CEP162Q5TB80 1403 aa25.57■■□□□ 1.68
LRCH2-202ENST00000538422 YTHDC1Q96MU7 727 aaKnown RBP25.57■■□□□ 1.68
LRCH2-202ENST00000538422 TNIKQ9UKE5 1360 aa25.54■■□□□ 1.68
LRCH2-202ENST00000538422 ABCC8Q09428 1581 aa25.54■■□□□ 1.68
LRCH2-202ENST00000538422 SOGA1O94964 1423 aa25.52■■□□□ 1.68
LRCH2-202ENST00000538422 CARMIL1Q5VZK9 1371 aa25.51■■□□□ 1.67
LRCH2-202ENST00000538422 ZNF326Q5BKZ1 582 aaKnown RBP25.45■■□□□ 1.66
LRCH2-202ENST00000538422 CNGB1Q14028 1251 aaPredicted RBP25.43■■□□□ 1.66
LRCH2-202ENST00000538422 EIF4G1Q04637 1599 aaKnown RBP25.42■■□□□ 1.66
LRCH2-202ENST00000538422 PLEKHD1A6NEE1 506 aa25.4■■□□□ 1.66
LRCH2-202ENST00000538422 SLC4A1APQ9BWU0 796 aaKnown RBP25.38■■□□□ 1.65
LRCH2-202ENST00000538422 TDRD9Q8NDG6 1382 aaKnown RBP25.38■■□□□ 1.65
LRCH2-202ENST00000538422 NCAPD3P42695 1498 aa25.38■■□□□ 1.65
LRCH2-202ENST00000538422 TSPY4P0CV99 314 aa25.36■■□□□ 1.65
LRCH2-202ENST00000538422 TSPY10P0CW01 314 aa25.36■■□□□ 1.65
LRCH2-202ENST00000538422 NEFLP07196 543 aa25.35■■□□□ 1.65
LRCH2-202ENST00000538422 CHIC2Q9UKJ5 165 aa25.35■■□□□ 1.65
LRCH2-202ENST00000538422 KCNH8Q96L42 1107 aa25.32■■□□□ 1.64
LRCH2-202ENST00000538422 ESF1Q9H501 851 aaKnown RBP25.31■■□□□ 1.64
LRCH2-202ENST00000538422 FANCD2Q9BXW9 1451 aa25.29■■□□□ 1.64
LRCH2-202ENST00000538422 DIEXFQ68CQ4 756 aaKnown RBP25.24■■□□□ 1.63
LRCH2-202ENST00000538422 FHAD1B1AJZ9 1412 aa25.19■■□□□ 1.62
LRCH2-202ENST00000538422 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.15■■□□□ 1.62
LRCH2-202ENST00000538422 BCANQ96GW7 911 aa25.15■■□□□ 1.62
LRCH2-202ENST00000538422 CFDP1Q9UEE9 299 aaPredicted RBP25.13■■□□□ 1.61
LRCH2-202ENST00000538422 TONSLQ96HA7 1378 aa25.11■■□□□ 1.61
LRCH2-202ENST00000538422 CHGAP10645 457 aaKnown RBP25.09■■□□□ 1.61
LRCH2-202ENST00000538422 RRP7BPQ9NSQ0 103 aa25.06■■□□□ 1.6
LRCH2-202ENST00000538422 CARMIL2Q6F5E8 1435 aa25.06■■□□□ 1.6
LRCH2-202ENST00000538422 STAG3Q9UJ98 1225 aa25.06■■□□□ 1.6
LRCH2-202ENST00000538422 BICRAQ9NZM4 1560 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms