RNA–Protein interactions for RNA: ENST00000314675.11

UBXN11-201, Transcript of UBX domain protein 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UBXN11, Length 2,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-201ENST00000314675 NISCHQ9Y2I1 1504 aa44.27■■■■■ 4.68
UBXN11-201ENST00000314675 CCDC180Q9P1Z9 1646 aa38.3■■■■□ 3.72
UBXN11-201ENST00000314675 ZCCHC6Q5VYS8 1495 aaKnown RBP37.23■■■■□ 3.55
UBXN11-201ENST00000314675 DCAF8L2P0C7V8 631 aa36.72■■■■□ 3.47
UBXN11-201ENST00000314675 SHROOM4Q9ULL8 1493 aa36.56■■■■□ 3.44
UBXN11-201ENST00000314675 DCAF1Q9Y4B6 1507 aa36.5■■■■□ 3.43
UBXN11-201ENST00000314675 ABCC9O60706 1549 aa36.17■■■■□ 3.38
UBXN11-201ENST00000314675 MYO15BQ96JP2 1530 aa35.93■■■■□ 3.34
UBXN11-201ENST00000314675 NACADO15069 1562 aa35.66■■■■□ 3.3
UBXN11-201ENST00000314675 SCRIBQ14160 1630 aa35.44■■■■□ 3.26
UBXN11-201ENST00000314675 SUPT5HO00267 1087 aaKnown RBP35.36■■■■□ 3.25
UBXN11-201ENST00000314675 RB1CC1Q8TDY2 1594 aa35.29■■■■□ 3.24
UBXN11-201ENST00000314675 UNC13AQ9UPW8 1703 aa34.62■■■■□ 3.13
UBXN11-201ENST00000314675 RSF1Q96T23 1441 aaPredicted RBP34.53■■■■□ 3.12
UBXN11-201ENST00000314675 CECR2Q9BXF3 1484 aa34.48■■■■□ 3.11
UBXN11-201ENST00000314675 BICRAQ9NZM4 1560 aa34.29■■■■□ 3.08
UBXN11-201ENST00000314675 PABPN1Q86U42 306 aaKnown RBP eCLIP34.28■■■■□ 3.089e-7■■■□□ 16.4
UBXN11-201ENST00000314675 MROH2BQ7Z745 1585 aa34.27■■■■□ 3.08
UBXN11-201ENST00000314675 BAZ1AQ9NRL2 1556 aaPredicted RBP34.12■■■■□ 3.05
UBXN11-201ENST00000314675 WIZO95785 1651 aa34■■■■□ 3.03
UBXN11-201ENST00000314675 CHIC1Q5VXU3 224 aa33.95■■■■□ 3.03
UBXN11-201ENST00000314675 SMARCA4P51532 1647 aa33.93■■■■□ 3.02
UBXN11-201ENST00000314675 TOP2AP11388 1531 aaKnown RBP33.57■■■□□ 2.96
UBXN11-201ENST00000314675 PEG3Q9GZU2 1588 aa33.47■■■□□ 2.95
UBXN11-201ENST00000314675 ATAD2BQ9ULI0 1458 aa33.35■■■□□ 2.93
UBXN11-201ENST00000314675 CCDC88BA6NC98 1476 aa33.33■■■□□ 2.93
UBXN11-201ENST00000314675 SMARCA2P51531 1590 aa33.31■■■□□ 2.92
UBXN11-201ENST00000314675 EIF4G1Q04637 1599 aaKnown RBP33.22■■■□□ 2.91
UBXN11-201ENST00000314675 BAZ1BQ9UIG0 1483 aaKnown RBP33.17■■■□□ 2.9
UBXN11-201ENST00000314675 TRIM41Q8WV44 630 aa33.16■■■□□ 2.9
UBXN11-201ENST00000314675 NCAPD3P42695 1498 aa32.98■■■□□ 2.87
UBXN11-201ENST00000314675 HMGXB3Q12766 1538 aa32.89■■■□□ 2.86
UBXN11-201ENST00000314675 ABCC8Q09428 1581 aa32.77■■■□□ 2.84
UBXN11-201ENST00000314675 LOC105371045A0A1W2PR82 267 aa32.76■■■□□ 2.84
UBXN11-201ENST00000314675 CC2D2AQ9P2K1 1620 aa32.67■■■□□ 2.82
UBXN11-201ENST00000314675 FAM9AQ8IZU1 332 aaPredicted RBP32.65■■■□□ 2.82
UBXN11-201ENST00000314675 WRNQ14191 1432 aaPredicted RBP eCLIP32.48■■■□□ 2.79
UBXN11-201ENST00000314675 CFTRP13569 1480 aa32.36■■■□□ 2.77
UBXN11-201ENST00000314675 SYNJ1O43426 1573 aa32.32■■■□□ 2.76
UBXN11-201ENST00000314675 SOGA1O94964 1423 aa32.26■■■□□ 2.75
UBXN11-201ENST00000314675 EHMT2Q96KQ7 1210 aa32.25■■■□□ 2.75
UBXN11-201ENST00000314675 CADPSQ9ULU8 1353 aa32.2■■■□□ 2.75
UBXN11-201ENST00000314675 RUSC2Q8N2Y8 1516 aa32.12■■■□□ 2.73
UBXN11-201ENST00000314675 TOP2BQ02880 1626 aa32.11■■■□□ 2.73
UBXN11-201ENST00000314675 EEA1Q15075 1411 aa32.09■■■□□ 2.73
UBXN11-201ENST00000314675 PRDM2Q13029 1718 aa32.05■■■□□ 2.72
UBXN11-201ENST00000314675 CSRNP3Q8WYN3 585 aa32.04■■■□□ 2.72
UBXN11-201ENST00000314675 BIVM-ERCC5R4GMW8 1640 aa32.03■■■□□ 2.72
UBXN11-201ENST00000314675 CUX1P39880 1505 aa31.99■■■□□ 2.71
UBXN11-201ENST00000314675 DNAJC5BQ9UF47 199 aa31.98■■■□□ 2.71
UBXN11-201ENST00000314675 NESP48681 1621 aa31.88■■■□□ 2.69
UBXN11-201ENST00000314675 FANCD2Q9BXW9 1451 aa31.84■■■□□ 2.69
UBXN11-201ENST00000314675 LAMC3Q9Y6N6 1575 aa31.75■■■□□ 2.67
UBXN11-201ENST00000314675 GOLGA3Q08378 1498 aa31.72■■■□□ 2.67
UBXN11-201ENST00000314675 TNIKQ9UKE5 1360 aa31.71■■■□□ 2.67
UBXN11-201ENST00000314675 UBTFP17480 764 aaKnown RBP31.71■■■□□ 2.67
UBXN11-201ENST00000314675 CEP164Q9UPV0 1460 aa31.69■■■□□ 2.66
UBXN11-201ENST00000314675 KIF21BO75037 1637 aa31.65■■■□□ 2.66
UBXN11-201ENST00000314675 KIF27Q86VH2 1401 aa31.61■■■□□ 2.65
UBXN11-201ENST00000314675 FGD5Q6ZNL6 1462 aa31.6■■■□□ 2.65
UBXN11-201ENST00000314675 CEP162Q5TB80 1403 aa31.6■■■□□ 2.65
UBXN11-201ENST00000314675 PCGF6Q9BYE7 350 aa31.59■■■□□ 2.65
UBXN11-201ENST00000314675 PDS5BQ9NTI5 1447 aa31.56■■■□□ 2.64
UBXN11-201ENST00000314675 RAPGEF2Q9Y4G8 1499 aa31.55■■■□□ 2.64
UBXN11-201ENST00000314675 DNMBPQ6XZF7 1577 aa31.54■■■□□ 2.64
UBXN11-201ENST00000314675 TOPBP1Q92547 1522 aa31.52■■■□□ 2.64
UBXN11-201ENST00000314675 PRXQ9BXM0 1461 aa31.48■■■□□ 2.63
UBXN11-201ENST00000314675 CUX2O14529 1486 aa31.48■■■□□ 2.63
UBXN11-201ENST00000314675 URB2Q14146 1524 aaKnown RBP31.43■■■□□ 2.62
UBXN11-201ENST00000314675 POLA1P09884 1462 aaPredicted RBP31.41■■■□□ 2.62
UBXN11-201ENST00000314675 TRIM26Q12899 539 aaPredicted RBP31.41■■■□□ 2.62
UBXN11-201ENST00000314675 ERICH3Q5RHP9 1530 aa31.39■■■□□ 2.62
UBXN11-201ENST00000314675 KIF21AQ7Z4S6 1674 aa31.38■■■□□ 2.61
UBXN11-201ENST00000314675 RAD54L2Q9Y4B4 1467 aa31.37■■■□□ 2.61
UBXN11-201ENST00000314675 IGF1RP08069 1367 aa31.36■■■□□ 2.61
UBXN11-201ENST00000314675 ABCA10Q8WWZ4 1543 aa31.3■■■□□ 2.6
UBXN11-201ENST00000314675 CLIP1P30622 1438 aa31.28■■■□□ 2.6
UBXN11-201ENST00000314675 PPARGC1BQ86YN6 1023 aaKnown RBP31.24■■■□□ 2.59
UBXN11-201ENST00000314675 RANGAP1P46060 587 aaPredicted RBP31.2■■■□□ 2.59
UBXN11-201ENST00000314675 CARMIL1Q5VZK9 1371 aa31.19■■■□□ 2.58
UBXN11-201ENST00000314675 MRC2Q9UBG0 1479 aa31.11■■■□□ 2.57
UBXN11-201ENST00000314675 WDR97A6NE52 1622 aa31.09■■■□□ 2.57
UBXN11-201ENST00000314675 TDRD9Q8NDG6 1382 aaKnown RBP31.07■■■□□ 2.56
UBXN11-201ENST00000314675 VPS8Q8N3P4 1428 aa31.02■■■□□ 2.56
UBXN11-201ENST00000314675 TARBP1Q13395 1621 aaKnown RBP30.99■■■□□ 2.55
UBXN11-201ENST00000314675 ABCA5Q8WWZ7 1642 aa30.97■■■□□ 2.55
UBXN11-201ENST00000314675 GAPVD1Q14C86 1478 aa30.97■■■□□ 2.55
UBXN11-201ENST00000314675 ERCC6Q03468 1493 aa30.94■■■□□ 2.54
UBXN11-201ENST00000314675 CUL7Q14999 1698 aa30.92■■■□□ 2.54
UBXN11-201ENST00000314675 TTBK1Q5TCY1 1321 aaPredicted RBP30.92■■■□□ 2.54
UBXN11-201ENST00000314675 WDR62O43379 1518 aa30.92■■■□□ 2.54
UBXN11-201ENST00000314675 ARAP1Q96P48 1450 aa30.9■■■□□ 2.54
UBXN11-201ENST00000314675 ARHGAP35Q9NRY4 1499 aa30.86■■■□□ 2.53
UBXN11-201ENST00000314675 HRCP23327 699 aa30.86■■■□□ 2.53
UBXN11-201ENST00000314675 AQRO60306 1485 aaKnown RBP eCLIP30.8■■■□□ 2.524e-14■■■■■ 52.8
UBXN11-201ENST00000314675 APLP2Q06481 763 aa30.78■■■□□ 2.52
UBXN11-201ENST00000314675 IFT140Q96RY7 1462 aa30.78■■■□□ 2.52
UBXN11-201ENST00000314675 THOC2Q8NI27 1593 aaKnown RBP30.74■■■□□ 2.51
UBXN11-201ENST00000314675 ZNF608Q9ULD9 1512 aaPredicted RBP30.71■■■□□ 2.51
UBXN11-201ENST00000314675 PBRM1Q86U86 1689 aa30.68■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms