RNA–Protein interactions for RNA: ENST00000615096.4

SCUBE1-208, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

TSL 2 BASIC

Gene SCUBE1, Length 1,119 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-208ENST00000615096 NISCHQ9Y2I1 1504 aa52.96■■■■■ 6.07
SCUBE1-208ENST00000615096 CCDC180Q9P1Z9 1646 aa46.79■■■■■ 5.08
SCUBE1-208ENST00000615096 ABCC9O60706 1549 aa45.24■■■■■ 4.83
SCUBE1-208ENST00000615096 ZCCHC6Q5VYS8 1495 aaKnown RBP44.24■■■■■ 4.67
SCUBE1-208ENST00000615096 DCAF8L2P0C7V8 631 aa43.95■■■■■ 4.63
SCUBE1-208ENST00000615096 NACADO15069 1562 aa43.87■■■■■ 4.61
SCUBE1-208ENST00000615096 DCAF1Q9Y4B6 1507 aa43.85■■■■■ 4.61
SCUBE1-208ENST00000615096 MYO15BQ96JP2 1530 aa43.83■■■■■ 4.61
SCUBE1-208ENST00000615096 RB1CC1Q8TDY2 1594 aa43.76■■■■■ 4.6
SCUBE1-208ENST00000615096 UNC13AQ9UPW8 1703 aa42.77■■■■■ 4.44
SCUBE1-208ENST00000615096 SCRIBQ14160 1630 aa42.74■■■■■ 4.43
SCUBE1-208ENST00000615096 BICRAQ9NZM4 1560 aa42.47■■■■■ 4.39
SCUBE1-208ENST00000615096 PABPN1Q86U42 306 aaKnown RBP eCLIP42.38■■■■■ 4.37
SCUBE1-208ENST00000615096 SHROOM4Q9ULL8 1493 aa42.15■■■■■ 4.34
SCUBE1-208ENST00000615096 EIF4G1Q04637 1599 aaKnown RBP41.27■■■■■ 4.2
SCUBE1-208ENST00000615096 CECR2Q9BXF3 1484 aa41.21■■■■■ 4.19
SCUBE1-208ENST00000615096 DNAJC5BQ9UF47 199 aa41.05■■■■■ 4.16
SCUBE1-208ENST00000615096 BAZ1AQ9NRL2 1556 aaPredicted RBP40.99■■■■■ 4.15
SCUBE1-208ENST00000615096 SMARCA4P51532 1647 aa40.95■■■■■ 4.15
SCUBE1-208ENST00000615096 CC2D2AQ9P2K1 1620 aa40.95■■■■■ 4.15
SCUBE1-208ENST00000615096 MROH2BQ7Z745 1585 aa40.83■■■■■ 4.13
SCUBE1-208ENST00000615096 ATAD2BQ9ULI0 1458 aa40.6■■■■■ 4.09
SCUBE1-208ENST00000615096 RSF1Q96T23 1441 aaPredicted RBP40.59■■■■■ 4.09
SCUBE1-208ENST00000615096 PEG3Q9GZU2 1588 aa40.57■■■■■ 4.08
SCUBE1-208ENST00000615096 SMARCA2P51531 1590 aa40.55■■■■■ 4.08
SCUBE1-208ENST00000615096 NCAPD3P42695 1498 aa40.51■■■■■ 4.07
SCUBE1-208ENST00000615096 WIZO95785 1651 aa40.4■■■■■ 4.06
SCUBE1-208ENST00000615096 HMGXB3Q12766 1538 aa40.33■■■■■ 4.05
SCUBE1-208ENST00000615096 BAZ1BQ9UIG0 1483 aaKnown RBP40.27■■■■■ 4.04
SCUBE1-208ENST00000615096 TOP2AP11388 1531 aaKnown RBP40.01■■■■□ 3.99
SCUBE1-208ENST00000615096 SUPT5HO00267 1087 aaKnown RBP39.94■■■■□ 3.98
SCUBE1-208ENST00000615096 CCDC88BA6NC98 1476 aa39.56■■■■□ 3.92
SCUBE1-208ENST00000615096 NESP48681 1621 aa39.34■■■■□ 3.89
SCUBE1-208ENST00000615096 CADPSQ9ULU8 1353 aa39.33■■■■□ 3.89
SCUBE1-208ENST00000615096 LAMC3Q9Y6N6 1575 aa39.31■■■■□ 3.88
SCUBE1-208ENST00000615096 CFTRP13569 1480 aa39.24■■■■□ 3.87
SCUBE1-208ENST00000615096 PDS5BQ9NTI5 1447 aa39.01■■■■□ 3.84
SCUBE1-208ENST00000615096 PRDM2Q13029 1718 aa38.92■■■■□ 3.82
SCUBE1-208ENST00000615096 ERCC6Q03468 1493 aa38.91■■■■□ 3.82
SCUBE1-208ENST00000615096 FANCD2Q9BXW9 1451 aa38.87■■■■□ 3.81
SCUBE1-208ENST00000615096 KIF21AQ7Z4S6 1674 aa38.86■■■■□ 3.81
SCUBE1-208ENST00000615096 CEP164Q9UPV0 1460 aa38.76■■■■□ 3.8
SCUBE1-208ENST00000615096 THOC2Q8NI27 1593 aaKnown RBP38.61■■■■□ 3.77
SCUBE1-208ENST00000615096 MRC2Q9UBG0 1479 aa38.59■■■■□ 3.77
SCUBE1-208ENST00000615096 URB2Q14146 1524 aaKnown RBP38.47■■■■□ 3.75
SCUBE1-208ENST00000615096 WDR62O43379 1518 aa38.45■■■■□ 3.75
SCUBE1-208ENST00000615096 ABCC8Q09428 1581 aa38.34■■■■□ 3.73
SCUBE1-208ENST00000615096 TOPBP1Q92547 1522 aa38.33■■■■□ 3.73
SCUBE1-208ENST00000615096 CUX2O14529 1486 aa38.32■■■■□ 3.72
SCUBE1-208ENST00000615096 DNMBPQ6XZF7 1577 aa38.31■■■■□ 3.72
SCUBE1-208ENST00000615096 CUX1P39880 1505 aa38.26■■■■□ 3.72
SCUBE1-208ENST00000615096 WRNQ14191 1432 aaPredicted RBP eCLIP38.22■■■■□ 3.71
SCUBE1-208ENST00000615096 SYNJ1O43426 1573 aa38.1■■■■□ 3.69
SCUBE1-208ENST00000615096 TOP2BQ02880 1626 aa38.08■■■■□ 3.69
SCUBE1-208ENST00000615096 BIVM-ERCC5R4GMW8 1640 aa38.07■■■■□ 3.68
SCUBE1-208ENST00000615096 POLA1P09884 1462 aaPredicted RBP38.04■■■■□ 3.68
SCUBE1-208ENST00000615096 FGD5Q6ZNL6 1462 aa38.03■■■■□ 3.68
SCUBE1-208ENST00000615096 IFT140Q96RY7 1462 aa37.93■■■■□ 3.66
SCUBE1-208ENST00000615096 SOGA1O94964 1423 aa37.89■■■■□ 3.66
SCUBE1-208ENST00000615096 TARBP1Q13395 1621 aaKnown RBP37.87■■■■□ 3.65
SCUBE1-208ENST00000615096 RAD54L2Q9Y4B4 1467 aa37.87■■■■□ 3.65
SCUBE1-208ENST00000615096 ZNF608Q9ULD9 1512 aaPredicted RBP37.72■■■■□ 3.63
SCUBE1-208ENST00000615096 ABCA10Q8WWZ4 1543 aa37.71■■■■□ 3.63
SCUBE1-208ENST00000615096 TRIM41Q8WV44 630 aa37.7■■■■□ 3.63
SCUBE1-208ENST00000615096 WDR97A6NE52 1622 aa37.69■■■■□ 3.62
SCUBE1-208ENST00000615096 CHIC1Q5VXU3 224 aa37.66■■■■□ 3.62
SCUBE1-208ENST00000615096 TDRD9Q8NDG6 1382 aaKnown RBP37.61■■■■□ 3.61
SCUBE1-208ENST00000615096 AQRO60306 1485 aaKnown RBP eCLIP37.58■■■■□ 3.61
SCUBE1-208ENST00000615096 EIF4G3O43432 1585 aaKnown RBP37.58■■■■□ 3.61
SCUBE1-208ENST00000615096 ABCA5Q8WWZ7 1642 aa37.49■■■■□ 3.59
SCUBE1-208ENST00000615096 GAPVD1Q14C86 1478 aa37.46■■■■□ 3.59
SCUBE1-208ENST00000615096 GRIN2BQ13224 1484 aa37.38■■■■□ 3.57
SCUBE1-208ENST00000615096 KIF27Q86VH2 1401 aa37.36■■■■□ 3.57
SCUBE1-208ENST00000615096 PBRM1Q86U86 1689 aa37.31■■■■□ 3.56
SCUBE1-208ENST00000615096 ERICH3Q5RHP9 1530 aa37.25■■■■□ 3.55
SCUBE1-208ENST00000615096 RUSC2Q8N2Y8 1516 aa37.25■■■■□ 3.55
SCUBE1-208ENST00000615096 SNAPC4Q5SXM2 1469 aa37.24■■■■□ 3.55
SCUBE1-208ENST00000615096 MAGI1Q96QZ7 1491 aaPredicted RBP37.21■■■■□ 3.55
SCUBE1-208ENST00000615096 IGF1RP08069 1367 aa37.18■■■■□ 3.54
SCUBE1-208ENST00000615096 ADAMTS12P58397 1594 aa37.08■■■■□ 3.53
SCUBE1-208ENST00000615096 SYNJ2O15056 1496 aa37.07■■■■□ 3.52
SCUBE1-208ENST00000615096 FHAD1B1AJZ9 1412 aa37.05■■■■□ 3.52
SCUBE1-208ENST00000615096 EEA1Q15075 1411 aa37.04■■■■□ 3.52
SCUBE1-208ENST00000615096 CUL7Q14999 1698 aa37■■■■□ 3.51
SCUBE1-208ENST00000615096 CHMP7Q8WUX9 453 aaPredicted RBP36.98■■■■□ 3.51
SCUBE1-208ENST00000615096 CHD1O14646 1710 aa36.98■■■■□ 3.51
SCUBE1-208ENST00000615096 FBLN2P98095 1184 aa36.97■■■■□ 3.51
SCUBE1-208ENST00000615096 CARMIL1Q5VZK9 1371 aa36.95■■■■□ 3.51
SCUBE1-208ENST00000615096 CSRNP3Q8WYN3 585 aa36.93■■■■□ 3.5
SCUBE1-208ENST00000615096 GRIN2AQ12879 1464 aa36.9■■■■□ 3.5
SCUBE1-208ENST00000615096 FAM9AQ8IZU1 332 aaPredicted RBP36.9■■■■□ 3.5
SCUBE1-208ENST00000615096 OSCARQ8IYS5 282 aa36.84■■■■□ 3.49
SCUBE1-208ENST00000615096 PRXQ9BXM0 1461 aa36.83■■■■□ 3.49
SCUBE1-208ENST00000615096 RAPGEF2Q9Y4G8 1499 aa36.79■■■■□ 3.48
SCUBE1-208ENST00000615096 NUP160Q12769 1436 aa36.73■■■■□ 3.47
SCUBE1-208ENST00000615096 CEP170Q5SW79 1584 aa36.7■■■■□ 3.47
SCUBE1-208ENST00000615096 CLASP1Q7Z460 1538 aa36.64■■■■□ 3.46
SCUBE1-208ENST00000615096 KIF21BO75037 1637 aa36.62■■■■□ 3.45
SCUBE1-208ENST00000615096 KIAA0586Q9BVV6 1533 aa36.51■■■■□ 3.44
SCUBE1-208ENST00000615096 DNAJC5Q9H3Z4 198 aa36.48■■■■□ 3.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms