RNA–Protein interactions for RNA: ENST00000220003.13

CSK-201, Transcript of C-terminal Src kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSK, Length 2,767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSK-201ENST00000220003 NISCHQ9Y2I1 1504 aa38.93■■■■□ 3.82
CSK-201ENST00000220003 SHROOM4Q9ULL8 1493 aa33.28■■■□□ 2.92
CSK-201ENST00000220003 CCDC180Q9P1Z9 1646 aa33.16■■■□□ 2.9
CSK-201ENST00000220003 DCAF8L2P0C7V8 631 aa33.08■■■□□ 2.89
CSK-201ENST00000220003 ZCCHC6Q5VYS8 1495 aaKnown RBP32.75■■■□□ 2.83
CSK-201ENST00000220003 SUPT5HO00267 1087 aaKnown RBP32.29■■■□□ 2.76
CSK-201ENST00000220003 ABCC9O60706 1549 aa31.81■■■□□ 2.68
CSK-201ENST00000220003 DCAF1Q9Y4B6 1507 aa31.66■■■□□ 2.66
CSK-201ENST00000220003 SCRIBQ14160 1630 aa31.4■■■□□ 2.62
CSK-201ENST00000220003 HRCP23327 699 aa30.94■■■□□ 2.54
CSK-201ENST00000220003 MYO15BQ96JP2 1530 aa30.92■■■□□ 2.54
CSK-201ENST00000220003 NACADO15069 1562 aa30.89■■■□□ 2.53
CSK-201ENST00000220003 CHIC1Q5VXU3 224 aa30.84■■■□□ 2.53
CSK-201ENST00000220003 RSF1Q96T23 1441 aaPredicted RBP30.66■■■□□ 2.5
CSK-201ENST00000220003 CECR2Q9BXF3 1484 aa30.65■■■□□ 2.5
CSK-201ENST00000220003 RB1CC1Q8TDY2 1594 aa30.59■■■□□ 2.49
CSK-201ENST00000220003 PABPN1Q86U42 306 aaKnown RBP eCLIP30.46■■■□□ 2.47
CSK-201ENST00000220003 PPARGC1BQ86YN6 1023 aaKnown RBP30.38■■■□□ 2.45
CSK-201ENST00000220003 MROH2BQ7Z745 1585 aa30.38■■■□□ 2.45
CSK-201ENST00000220003 PCGF6Q9BYE7 350 aa30.33■■■□□ 2.45
CSK-201ENST00000220003 UNC13AQ9UPW8 1703 aa30.23■■■□□ 2.43
CSK-201ENST00000220003 WIZO95785 1651 aa30.2■■■□□ 2.43
CSK-201ENST00000220003 LOC105371045A0A1W2PR82 267 aa30.16■■■□□ 2.42
CSK-201ENST00000220003 EHMT2Q96KQ7 1210 aa29.97■■■□□ 2.39
CSK-201ENST00000220003 FAM9AQ8IZU1 332 aaPredicted RBP29.96■■■□□ 2.39
CSK-201ENST00000220003 TRIM41Q8WV44 630 aa29.92■■■□□ 2.38
CSK-201ENST00000220003 BICRAQ9NZM4 1560 aa29.9■■■□□ 2.38
CSK-201ENST00000220003 BAZ1AQ9NRL2 1556 aaPredicted RBP29.89■■■□□ 2.37
CSK-201ENST00000220003 PELP1Q8IZL8 1130 aaKnown RBP29.84■■■□□ 2.37
CSK-201ENST00000220003 SMARCA4P51532 1647 aa29.78■■■□□ 2.36
CSK-201ENST00000220003 CCDC88BA6NC98 1476 aa29.54■■■□□ 2.32
CSK-201ENST00000220003 TOP2AP11388 1531 aaKnown RBP29.51■■■□□ 2.31
CSK-201ENST00000220003 SMARCA2P51531 1590 aa29.41■■■□□ 2.3
CSK-201ENST00000220003 ABCC8Q09428 1581 aa29.39■■■□□ 2.3
CSK-201ENST00000220003 SCAF1Q9H7N4 1312 aaKnown RBP29.34■■■□□ 2.29
CSK-201ENST00000220003 EIF4G1Q04637 1599 aaKnown RBP29.27■■■□□ 2.28
CSK-201ENST00000220003 TRIM26Q12899 539 aaPredicted RBP29.27■■■□□ 2.28
CSK-201ENST00000220003 ATAD2BQ9ULI0 1458 aa29.23■■■□□ 2.27
CSK-201ENST00000220003 BAZ1BQ9UIG0 1483 aaKnown RBP29.13■■■□□ 2.25
CSK-201ENST00000220003 PEG3Q9GZU2 1588 aa29.05■■■□□ 2.24
CSK-201ENST00000220003 ZEB1P37275 1124 aaPredicted RBP29.01■■■□□ 2.23
CSK-201ENST00000220003 SOGA1O94964 1423 aa28.99■■■□□ 2.23
CSK-201ENST00000220003 RUSC2Q8N2Y8 1516 aa28.94■■■□□ 2.22
CSK-201ENST00000220003 WRNQ14191 1432 aaPredicted RBP eCLIP28.81■■■□□ 2.2
CSK-201ENST00000220003 TTBK1Q5TCY1 1321 aaPredicted RBP28.76■■■□□ 2.19
CSK-201ENST00000220003 SYNJ1O43426 1573 aa28.73■■■□□ 2.19
CSK-201ENST00000220003 UBTFP17480 764 aaKnown RBP28.68■■■□□ 2.18
CSK-201ENST00000220003 CSRNP3Q8WYN3 585 aa28.67■■■□□ 2.18
CSK-201ENST00000220003 NCAPD3P42695 1498 aa28.67■■■□□ 2.18
CSK-201ENST00000220003 MYT1Q01538 1121 aa28.65■■■□□ 2.18
CSK-201ENST00000220003 RANGAP1P46060 587 aaPredicted RBP28.62■■■□□ 2.17
CSK-201ENST00000220003 ACIN1Q9UKV3 1341 aaKnown RBP28.57■■■□□ 2.16
CSK-201ENST00000220003 NEUROD1Q13562 356 aa28.52■■■□□ 2.16
CSK-201ENST00000220003 HMGXB3Q12766 1538 aa28.52■■■□□ 2.16
CSK-201ENST00000220003 CC2D2AQ9P2K1 1620 aa28.46■■■□□ 2.15
CSK-201ENST00000220003 CEP162Q5TB80 1403 aa28.42■■■□□ 2.14
CSK-201ENST00000220003 DNAJC5BQ9UF47 199 aa28.4■■■□□ 2.14
CSK-201ENST00000220003 GTF3C3Q9Y5Q9 886 aa28.37■■■□□ 2.13
CSK-201ENST00000220003 CFTRP13569 1480 aa28.3■■■□□ 2.12
CSK-201ENST00000220003 TNIKQ9UKE5 1360 aa28.3■■■□□ 2.12
CSK-201ENST00000220003 EEA1Q15075 1411 aa28.3■■■□□ 2.12
CSK-201ENST00000220003 CUX1P39880 1505 aa28.28■■■□□ 2.12
CSK-201ENST00000220003 TOP2BQ02880 1626 aa28.27■■■□□ 2.12
CSK-201ENST00000220003 GOLGA3Q08378 1498 aa28.26■■■□□ 2.11
CSK-201ENST00000220003 RAPGEF2Q9Y4G8 1499 aa28.25■■■□□ 2.11
CSK-201ENST00000220003 CADPSQ9ULU8 1353 aa28.18■■■□□ 2.1
CSK-201ENST00000220003 CENPBP07199 599 aaPredicted RBP28.18■■■□□ 2.1
CSK-201ENST00000220003 NESP48681 1621 aa28.16■■■□□ 2.1
CSK-201ENST00000220003 CEP164Q9UPV0 1460 aa28.14■■■□□ 2.1
CSK-201ENST00000220003 BIVM-ERCC5R4GMW8 1640 aa28.12■■■□□ 2.09
CSK-201ENST00000220003 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.1■■■□□ 2.09
CSK-201ENST00000220003 DIEXFQ68CQ4 756 aaKnown RBP28.06■■■□□ 2.08
CSK-201ENST00000220003 CLIP1P30622 1438 aa28.03■■■□□ 2.08
CSK-201ENST00000220003 CCER1Q8TC90 406 aaPredicted RBP28.02■■■□□ 2.08
CSK-201ENST00000220003 KIF21BO75037 1637 aa28.01■■■□□ 2.08
CSK-201ENST00000220003 FANCD2Q9BXW9 1451 aa27.94■■■□□ 2.06
CSK-201ENST00000220003 KIF27Q86VH2 1401 aa27.93■■■□□ 2.06
CSK-201ENST00000220003 CUX2O14529 1486 aa27.93■■■□□ 2.06
CSK-201ENST00000220003 FGD5Q6ZNL6 1462 aa27.9■■■□□ 2.06
CSK-201ENST00000220003 PRXQ9BXM0 1461 aa27.86■■■□□ 2.05
CSK-201ENST00000220003 RAD54L2Q9Y4B4 1467 aa27.84■■■□□ 2.05
CSK-201ENST00000220003 PRDM2Q13029 1718 aa27.84■■■□□ 2.05
CSK-201ENST00000220003 IGF1RP08069 1367 aa27.78■■■□□ 2.04
CSK-201ENST00000220003 HNRNPUL2Q1KMD3 747 aaKnown RBP27.75■■■□□ 2.03
CSK-201ENST00000220003 APLP2Q06481 763 aa27.74■■■□□ 2.03
CSK-201ENST00000220003 VPS8Q8N3P4 1428 aa27.73■■■□□ 2.03
CSK-201ENST00000220003 P3H3Q8IVL6 736 aa27.7■■■□□ 2.02
CSK-201ENST00000220003 YTHDC1Q96MU7 727 aaKnown RBP27.7■■■□□ 2.02
CSK-201ENST00000220003 TOPBP1Q92547 1522 aa27.67■■■□□ 2.02
CSK-201ENST00000220003 ERICH3Q5RHP9 1530 aa27.65■■■□□ 2.02
CSK-201ENST00000220003 CARMIL1Q5VZK9 1371 aa27.65■■■□□ 2.02
CSK-201ENST00000220003 POLA1P09884 1462 aaPredicted RBP27.64■■■□□ 2.02
CSK-201ENST00000220003 ARAP1Q96P48 1450 aa27.64■■■□□ 2.02
CSK-201ENST00000220003 KANK4Q5T7N3 995 aaPredicted RBP27.64■■■□□ 2.01
CSK-201ENST00000220003 URB2Q14146 1524 aaKnown RBP27.6■■■□□ 2.01
CSK-201ENST00000220003 TDRD9Q8NDG6 1382 aaKnown RBP27.59■■■□□ 2.01
CSK-201ENST00000220003 DNMBPQ6XZF7 1577 aa27.56■■■□□ 2
CSK-201ENST00000220003 ATP1B4Q9UN42 357 aaPredicted RBP27.53■■■□□ 2
CSK-201ENST00000220003 ARHGAP35Q9NRY4 1499 aa27.52■■■□□ 2
CSK-201ENST00000220003 LAMC3Q9Y6N6 1575 aa27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms