RNA–Protein interactions for RNA: ENST00000315691.7

C3orf58-201, Transcript of chromosome 3 open reading frame 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C3orf58, Length 4,346 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf58-201ENST00000315691 NISCHQ9Y2I1 1504 aa31.91■■■□□ 2.7
C3orf58-201ENST00000315691 DCAF8L2P0C7V8 631 aa29.72■■■□□ 2.35
C3orf58-201ENST00000315691 SHROOM4Q9ULL8 1493 aa29.14■■■□□ 2.26
C3orf58-201ENST00000315691 SUPT5HO00267 1087 aaKnown RBP28.89■■■□□ 2.21
C3orf58-201ENST00000315691 PELP1Q8IZL8 1130 aaKnown RBP28.11■■■□□ 2.09
C3orf58-201ENST00000315691 MYT1Q01538 1121 aa27.56■■■□□ 2
C3orf58-201ENST00000315691 EHMT2Q96KQ7 1210 aa27.41■■□□□ 1.98
C3orf58-201ENST00000315691 PCGF6Q9BYE7 350 aa27.32■■□□□ 1.96
C3orf58-201ENST00000315691 HRCP23327 699 aa27.08■■□□□ 1.93
C3orf58-201ENST00000315691 FAM9AQ8IZU1 332 aaPredicted RBP27.03■■□□□ 1.92
C3orf58-201ENST00000315691 CHIC1Q5VXU3 224 aa26.78■■□□□ 1.88
C3orf58-201ENST00000315691 PPARGC1BQ86YN6 1023 aaKnown RBP26.69■■□□□ 1.86
C3orf58-201ENST00000315691 ZCCHC6Q5VYS8 1495 aaKnown RBP26.66■■□□□ 1.86
C3orf58-201ENST00000315691 TRIM41Q8WV44 630 aa26.61■■□□□ 1.85
C3orf58-201ENST00000315691 ABCC9O60706 1549 aa26.61■■□□□ 1.85
C3orf58-201ENST00000315691 CENPBP07199 599 aaPredicted RBP26.57■■□□□ 1.84
C3orf58-201ENST00000315691 LOC105371045A0A1W2PR82 267 aa26.56■■□□□ 1.84
C3orf58-201ENST00000315691 CCDC180Q9P1Z9 1646 aa26.41■■□□□ 1.82
C3orf58-201ENST00000315691 TTBK1Q5TCY1 1321 aaPredicted RBP26.38■■□□□ 1.81
C3orf58-201ENST00000315691 ZEB1P37275 1124 aaPredicted RBP26.36■■□□□ 1.81
C3orf58-201ENST00000315691 RANGAP1P46060 587 aaPredicted RBP26.06■■□□□ 1.76
C3orf58-201ENST00000315691 PABPN1Q86U42 306 aaKnown RBP eCLIP26.05■■□□□ 1.76
C3orf58-201ENST00000315691 SCRIBQ14160 1630 aa26.01■■□□□ 1.76
C3orf58-201ENST00000315691 YTHDC1Q96MU7 727 aaKnown RBP25.95■■□□□ 1.74
C3orf58-201ENST00000315691 UBTFP17480 764 aaKnown RBP25.83■■□□□ 1.73
C3orf58-201ENST00000315691 TRIM26Q12899 539 aaPredicted RBP25.81■■□□□ 1.72
C3orf58-201ENST00000315691 MYO15BQ96JP2 1530 aa25.77■■□□□ 1.72
C3orf58-201ENST00000315691 CCER1Q8TC90 406 aaPredicted RBP25.77■■□□□ 1.72
C3orf58-201ENST00000315691 GTF3C3Q9Y5Q9 886 aa25.76■■□□□ 1.71
C3orf58-201ENST00000315691 ERICH6Q7L0X2 663 aa25.7■■□□□ 1.7
C3orf58-201ENST00000315691 SCAF1Q9H7N4 1312 aaKnown RBP25.67■■□□□ 1.7
C3orf58-201ENST00000315691 APLP2Q06481 763 aa25.62■■□□□ 1.69
C3orf58-201ENST00000315691 ACIN1Q9UKV3 1341 aaKnown RBP25.5■■□□□ 1.67
C3orf58-201ENST00000315691 RSF1Q96T23 1441 aaPredicted RBP25.49■■□□□ 1.67
C3orf58-201ENST00000315691 DCAF1Q9Y4B6 1507 aa25.41■■□□□ 1.66
C3orf58-201ENST00000315691 DIEXFQ68CQ4 756 aaKnown RBP25.31■■□□□ 1.64
C3orf58-201ENST00000315691 CECR2Q9BXF3 1484 aa25.29■■□□□ 1.64
C3orf58-201ENST00000315691 ATP1B4Q9UN42 357 aaPredicted RBP25.23■■□□□ 1.63
C3orf58-201ENST00000315691 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.21■■□□□ 1.63
C3orf58-201ENST00000315691 NEUROD1Q13562 356 aa25.17■■□□□ 1.62
C3orf58-201ENST00000315691 NACADO15069 1562 aa25.11■■□□□ 1.61
C3orf58-201ENST00000315691 HNRNPUL2Q1KMD3 747 aaKnown RBP25.1■■□□□ 1.61
C3orf58-201ENST00000315691 NEFLP07196 543 aa25.08■■□□□ 1.6
C3orf58-201ENST00000315691 RB1CC1Q8TDY2 1594 aa25.05■■□□□ 1.6
C3orf58-201ENST00000315691 CSRNP3Q8WYN3 585 aa24.96■■□□□ 1.59
C3orf58-201ENST00000315691 MROH2BQ7Z745 1585 aa24.96■■□□□ 1.59
C3orf58-201ENST00000315691 ITGAEP38570 1179 aa24.95■■□□□ 1.58
C3orf58-201ENST00000315691 BCL11AQ9H165 835 aa24.78■■□□□ 1.56
C3orf58-201ENST00000315691 WIZO95785 1651 aa24.69■■□□□ 1.54
C3orf58-201ENST00000315691 BCANQ96GW7 911 aa24.67■■□□□ 1.54
C3orf58-201ENST00000315691 BAZ1AQ9NRL2 1556 aaPredicted RBP24.67■■□□□ 1.54
C3orf58-201ENST00000315691 ANP32EQ9BTT0 268 aa24.53■■□□□ 1.52
C3orf58-201ENST00000315691 ABCC8Q09428 1581 aa24.53■■□□□ 1.52
C3orf58-201ENST00000315691 P3H3Q8IVL6 736 aa24.52■■□□□ 1.52
C3orf58-201ENST00000315691 CCDC88BA6NC98 1476 aa24.5■■□□□ 1.51
C3orf58-201ENST00000315691 SOGA1O94964 1423 aa24.49■■□□□ 1.51
C3orf58-201ENST00000315691 ZNF316A6NFI3 1004 aaPredicted RBP24.47■■□□□ 1.51
C3orf58-201ENST00000315691 WRNQ14191 1432 aaPredicted RBP eCLIP24.43■■□□□ 1.5
C3orf58-201ENST00000315691 RTL5Q5HYW3 569 aaPredicted RBP24.41■■□□□ 1.5
C3orf58-201ENST00000315691 BAZ1BQ9UIG0 1483 aaKnown RBP24.41■■□□□ 1.5
C3orf58-201ENST00000315691 CEP162Q5TB80 1403 aa24.4■■□□□ 1.5
C3orf58-201ENST00000315691 FAM50AQ14320 339 aaKnown RBP24.36■■□□□ 1.49
C3orf58-201ENST00000315691 CLIP1P30622 1438 aa24.24■■□□□ 1.47
C3orf58-201ENST00000315691 ARID3CA6NKF2 412 aa24.21■■□□□ 1.47
C3orf58-201ENST00000315691 TOP2AP11388 1531 aaKnown RBP24.2■■□□□ 1.47
C3orf58-201ENST00000315691 SMARCA4P51532 1647 aa24.19■■□□□ 1.46
C3orf58-201ENST00000315691 TNIKQ9UKE5 1360 aa24.17■■□□□ 1.46
C3orf58-201ENST00000315691 GOLGA3Q08378 1498 aa24.17■■□□□ 1.46
C3orf58-201ENST00000315691 RUSC2Q8N2Y8 1516 aa24.16■■□□□ 1.46
C3orf58-201ENST00000315691 EIF5BO60841 1220 aaKnown RBP24.15■■□□□ 1.46
C3orf58-201ENST00000315691 CLSPNQ9HAW4 1339 aa24.13■■□□□ 1.45
C3orf58-201ENST00000315691 EEA1Q15075 1411 aa24.11■■□□□ 1.45
C3orf58-201ENST00000315691 CDK11AQ9UQ88 783 aaPredicted RBP24.1■■□□□ 1.45
C3orf58-201ENST00000315691 MIER1Q8N108 512 aa24.08■■□□□ 1.44
C3orf58-201ENST00000315691 FKBP8Q14318 412 aa24.05■■□□□ 1.44
C3orf58-201ENST00000315691 ATAD2BQ9ULI0 1458 aa24■■□□□ 1.43
C3orf58-201ENST00000315691 FBLN2P98095 1184 aa24■■□□□ 1.43
C3orf58-201ENST00000315691 CEP164Q9UPV0 1460 aa23.99■■□□□ 1.43
C3orf58-201ENST00000315691 SMARCA2P51531 1590 aa23.97■■□□□ 1.43
C3orf58-201ENST00000315691 MYT1LQ9UL68 1186 aa23.94■■□□□ 1.42
C3orf58-201ENST00000315691 DAXXQ9UER7 740 aaPredicted RBP23.93■■□□□ 1.42
C3orf58-201ENST00000315691 CNGB1Q14028 1251 aaPredicted RBP23.92■■□□□ 1.42
C3orf58-201ENST00000315691 KIF27Q86VH2 1401 aa23.87■■□□□ 1.41
C3orf58-201ENST00000315691 TRIM52Q96A61 297 aa23.86■■□□□ 1.41
C3orf58-201ENST00000315691 NBR1Q14596 966 aa23.86■■□□□ 1.41
C3orf58-201ENST00000315691 POLR3GLQ9BT43 218 aa23.81■■□□□ 1.4
C3orf58-201ENST00000315691 SUPT16HQ9Y5B9 1047 aaKnown RBP23.8■■□□□ 1.4
C3orf58-201ENST00000315691 KANK4Q5T7N3 995 aaPredicted RBP23.78■■□□□ 1.4
C3orf58-201ENST00000315691 RAPGEF2Q9Y4G8 1499 aa23.77■■□□□ 1.4
C3orf58-201ENST00000315691 CUX2O14529 1486 aa23.74■■□□□ 1.39
C3orf58-201ENST00000315691 PRKCSHP14314 528 aaPredicted RBP23.73■■□□□ 1.39
C3orf58-201ENST00000315691 CHIC2Q9UKJ5 165 aa23.68■■□□□ 1.38
C3orf58-201ENST00000315691 VPS8Q8N3P4 1428 aa23.68■■□□□ 1.38
C3orf58-201ENST00000315691 TSHZ2Q9NRE2 1034 aa23.67■■□□□ 1.38
C3orf58-201ENST00000315691 HIRIP3Q9BW71 556 aaPredicted RBP23.64■■□□□ 1.38
C3orf58-201ENST00000315691 CARMIL1Q5VZK9 1371 aa23.63■■□□□ 1.37
C3orf58-201ENST00000315691 ANP32AP39687 249 aaKnown RBP23.62■■□□□ 1.37
C3orf58-201ENST00000315691 BICRAQ9NZM4 1560 aa23.61■■□□□ 1.37
C3orf58-201ENST00000315691 RTN4Q9NQC3 1192 aaKnown RBP23.61■■□□□ 1.37
C3orf58-201ENST00000315691 ZNF777Q9ULD5 760 aaPredicted RBP23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms