RNA–Protein interactions for RNA: ENST00000528669.5

TM9SF1-206, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 5 BASIC

Gene TM9SF1, Length 2,425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-206ENST00000528669 NISCHQ9Y2I1 1504 aa39.02■■■■□ 3.84
TM9SF1-206ENST00000528669 SHROOM4Q9ULL8 1493 aa33.42■■■□□ 2.94
TM9SF1-206ENST00000528669 CCDC180Q9P1Z9 1646 aa33.12■■■□□ 2.89
TM9SF1-206ENST00000528669 ZCCHC6Q5VYS8 1495 aaKnown RBP33.01■■■□□ 2.87
TM9SF1-206ENST00000528669 SUPT5HO00267 1087 aaKnown RBP32.78■■■□□ 2.84
TM9SF1-206ENST00000528669 DCAF8L2P0C7V8 631 aa32.46■■■□□ 2.79
TM9SF1-206ENST00000528669 DCAF1Q9Y4B6 1507 aa31.95■■■□□ 2.71
TM9SF1-206ENST00000528669 CHIC1Q5VXU3 224 aa31.85■■■□□ 2.69
TM9SF1-206ENST00000528669 MYO15BQ96JP2 1530 aa31.77■■■□□ 2.68
TM9SF1-206ENST00000528669 ABCC9O60706 1549 aa31.16■■■□□ 2.58
TM9SF1-206ENST00000528669 SCRIBQ14160 1630 aa31.15■■■□□ 2.58
TM9SF1-206ENST00000528669 LOC105371045A0A1W2PR82 267 aa30.96■■■□□ 2.55
TM9SF1-206ENST00000528669 PCGF6Q9BYE7 350 aa30.95■■■□□ 2.54
TM9SF1-206ENST00000528669 HRCP23327 699 aa30.93■■■□□ 2.54
TM9SF1-206ENST00000528669 RSF1Q96T23 1441 aaPredicted RBP30.91■■■□□ 2.54
TM9SF1-206ENST00000528669 RB1CC1Q8TDY2 1594 aa30.63■■■□□ 2.49
TM9SF1-206ENST00000528669 NACADO15069 1562 aa30.62■■■□□ 2.49
TM9SF1-206ENST00000528669 TRIM41Q8WV44 630 aa30.49■■■□□ 2.47
TM9SF1-206ENST00000528669 CECR2Q9BXF3 1484 aa30.49■■■□□ 2.47
TM9SF1-206ENST00000528669 MROH2BQ7Z745 1585 aa30.38■■■□□ 2.45
TM9SF1-206ENST00000528669 PPARGC1BQ86YN6 1023 aaKnown RBP30.37■■■□□ 2.45
TM9SF1-206ENST00000528669 FAM9AQ8IZU1 332 aaPredicted RBP30.31■■■□□ 2.44
TM9SF1-206ENST00000528669 TRIM26Q12899 539 aaPredicted RBP30.3■■■□□ 2.44
TM9SF1-206ENST00000528669 WIZO95785 1651 aa30.24■■■□□ 2.43
TM9SF1-206ENST00000528669 EHMT2Q96KQ7 1210 aa30.11■■■□□ 2.41
TM9SF1-206ENST00000528669 BAZ1AQ9NRL2 1556 aaPredicted RBP30■■■□□ 2.39
TM9SF1-206ENST00000528669 EIF4G1Q04637 1599 aaKnown RBP29.8■■■□□ 2.36
TM9SF1-206ENST00000528669 UNC13AQ9UPW8 1703 aa29.75■■■□□ 2.35
TM9SF1-206ENST00000528669 SMARCA4P51532 1647 aa29.72■■■□□ 2.35
TM9SF1-206ENST00000528669 TOP2AP11388 1531 aaKnown RBP29.71■■■□□ 2.35
TM9SF1-206ENST00000528669 CCDC88BA6NC98 1476 aa29.62■■■□□ 2.33
TM9SF1-206ENST00000528669 ZEB1P37275 1124 aaPredicted RBP29.6■■■□□ 2.33
TM9SF1-206ENST00000528669 ABCC8Q09428 1581 aa29.59■■■□□ 2.33
TM9SF1-206ENST00000528669 SMARCA2P51531 1590 aa29.57■■■□□ 2.32
TM9SF1-206ENST00000528669 PABPN1Q86U42 306 aaKnown RBP eCLIP29.44■■■□□ 2.3
TM9SF1-206ENST00000528669 BICRAQ9NZM4 1560 aa29.33■■■□□ 2.29
TM9SF1-206ENST00000528669 SOGA1O94964 1423 aa29.31■■■□□ 2.28
TM9SF1-206ENST00000528669 RUSC2Q8N2Y8 1516 aa29.18■■■□□ 2.26
TM9SF1-206ENST00000528669 CEP162Q5TB80 1403 aa29.18■■■□□ 2.26
TM9SF1-206ENST00000528669 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.14■■■□□ 2.26
TM9SF1-206ENST00000528669 TTBK1Q5TCY1 1321 aaPredicted RBP29.14■■■□□ 2.26
TM9SF1-206ENST00000528669 CSRNP3Q8WYN3 585 aa29.12■■■□□ 2.25
TM9SF1-206ENST00000528669 TNIKQ9UKE5 1360 aa29.1■■■□□ 2.25
TM9SF1-206ENST00000528669 WRNQ14191 1432 aaPredicted RBP eCLIP29.1■■■□□ 2.25
TM9SF1-206ENST00000528669 PEG3Q9GZU2 1588 aa29.1■■■□□ 2.25
TM9SF1-206ENST00000528669 EEA1Q15075 1411 aa29.08■■■□□ 2.25
TM9SF1-206ENST00000528669 UBTFP17480 764 aaKnown RBP29.05■■■□□ 2.24
TM9SF1-206ENST00000528669 CCER1Q8TC90 406 aaPredicted RBP29.04■■■□□ 2.24
TM9SF1-206ENST00000528669 ATAD2BQ9ULI0 1458 aa28.94■■■□□ 2.22
TM9SF1-206ENST00000528669 GOLGA3Q08378 1498 aa28.94■■■□□ 2.22
TM9SF1-206ENST00000528669 SYNJ1O43426 1573 aa28.92■■■□□ 2.22
TM9SF1-206ENST00000528669 BAZ1BQ9UIG0 1483 aaKnown RBP28.88■■■□□ 2.21
TM9SF1-206ENST00000528669 CEP164Q9UPV0 1460 aa28.76■■■□□ 2.19
TM9SF1-206ENST00000528669 KIF21BO75037 1637 aa28.72■■■□□ 2.19
TM9SF1-206ENST00000528669 CLIP1P30622 1438 aa28.62■■■□□ 2.17
TM9SF1-206ENST00000528669 RAPGEF2Q9Y4G8 1499 aa28.59■■■□□ 2.17
TM9SF1-206ENST00000528669 SCAF1Q9H7N4 1312 aaKnown RBP28.55■■■□□ 2.16
TM9SF1-206ENST00000528669 RANGAP1P46060 587 aaPredicted RBP28.54■■■□□ 2.16
TM9SF1-206ENST00000528669 TOP2BQ02880 1626 aa28.53■■■□□ 2.16
TM9SF1-206ENST00000528669 VPS8Q8N3P4 1428 aa28.49■■■□□ 2.15
TM9SF1-206ENST00000528669 DIEXFQ68CQ4 756 aaKnown RBP28.48■■■□□ 2.15
TM9SF1-206ENST00000528669 HNRNPUL2Q1KMD3 747 aaKnown RBP28.47■■■□□ 2.15
TM9SF1-206ENST00000528669 BIVM-ERCC5R4GMW8 1640 aa28.42■■■□□ 2.14
TM9SF1-206ENST00000528669 APLP2Q06481 763 aa28.39■■■□□ 2.14
TM9SF1-206ENST00000528669 NCAPD3P42695 1498 aa28.34■■■□□ 2.13
TM9SF1-206ENST00000528669 HMGXB3Q12766 1538 aa28.33■■■□□ 2.13
TM9SF1-206ENST00000528669 CUX1P39880 1505 aa28.27■■■□□ 2.12
TM9SF1-206ENST00000528669 PRXQ9BXM0 1461 aa28.26■■■□□ 2.11
TM9SF1-206ENST00000528669 ACIN1Q9UKV3 1341 aaKnown RBP28.25■■■□□ 2.11
TM9SF1-206ENST00000528669 ZNF316A6NFI3 1004 aaPredicted RBP28.25■■■□□ 2.11
TM9SF1-206ENST00000528669 NEUROD1Q13562 356 aa28.24■■■□□ 2.11
TM9SF1-206ENST00000528669 ERICH3Q5RHP9 1530 aa28.23■■■□□ 2.11
TM9SF1-206ENST00000528669 ARAP1Q96P48 1450 aa28.16■■■□□ 2.1
TM9SF1-206ENST00000528669 CFTRP13569 1480 aa28.14■■■□□ 2.1
TM9SF1-206ENST00000528669 KIF27Q86VH2 1401 aa28.13■■■□□ 2.09
TM9SF1-206ENST00000528669 CENPBP07199 599 aaPredicted RBP28.07■■■□□ 2.08
TM9SF1-206ENST00000528669 KANK4Q5T7N3 995 aaPredicted RBP28.06■■■□□ 2.08
TM9SF1-206ENST00000528669 GTF3C3Q9Y5Q9 886 aa27.96■■■□□ 2.07
TM9SF1-206ENST00000528669 PRDM2Q13029 1718 aa27.93■■■□□ 2.06
TM9SF1-206ENST00000528669 ARHGAP35Q9NRY4 1499 aa27.91■■■□□ 2.06
TM9SF1-206ENST00000528669 CUX2O14529 1486 aa27.88■■■□□ 2.05
TM9SF1-206ENST00000528669 MIER1Q8N108 512 aa27.88■■■□□ 2.05
TM9SF1-206ENST00000528669 YTHDC1Q96MU7 727 aaKnown RBP27.87■■■□□ 2.05
TM9SF1-206ENST00000528669 DHX57Q6P158 1386 aaKnown RBP27.86■■■□□ 2.05
TM9SF1-206ENST00000528669 PELP1Q8IZL8 1130 aaKnown RBP27.85■■■□□ 2.05
TM9SF1-206ENST00000528669 IGF1RP08069 1367 aa27.83■■■□□ 2.05
TM9SF1-206ENST00000528669 CADPSQ9ULU8 1353 aa27.83■■■□□ 2.05
TM9SF1-206ENST00000528669 RRBP1Q9P2E9 1410 aaKnown RBP27.82■■■□□ 2.04
TM9SF1-206ENST00000528669 FGD5Q6ZNL6 1462 aa27.76■■■□□ 2.04
TM9SF1-206ENST00000528669 CLSPNQ9HAW4 1339 aa27.76■■■□□ 2.03
TM9SF1-206ENST00000528669 CCNB3Q8WWL7 1395 aa27.73■■■□□ 2.03
TM9SF1-206ENST00000528669 CARMIL1Q5VZK9 1371 aa27.72■■■□□ 2.03
TM9SF1-206ENST00000528669 ITGAEP38570 1179 aa27.72■■■□□ 2.03
TM9SF1-206ENST00000528669 CC2D2AQ9P2K1 1620 aa27.65■■■□□ 2.02
TM9SF1-206ENST00000528669 TIAM1Q13009 1591 aa27.61■■■□□ 2.01
TM9SF1-206ENST00000528669 FANCD2Q9BXW9 1451 aa27.58■■■□□ 2.01
TM9SF1-206ENST00000528669 P3H3Q8IVL6 736 aa27.55■■■□□ 2
TM9SF1-206ENST00000528669 MAP3K1Q13233 1512 aa27.52■■■□□ 2
TM9SF1-206ENST00000528669 LRRC9Q6ZRR7 1453 aa27.51■■□□□ 1.99
TM9SF1-206ENST00000528669 RAD54L2Q9Y4B4 1467 aa27.51■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms