RNA–Protein interactions for RNA: ENST00000373366.2

GJB3-202, Transcript of gap junction protein beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GJB3, Length 2,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GJB3-202ENST00000373366 NISCHQ9Y2I1 1504 aa42.31■■■■■ 4.36
GJB3-202ENST00000373366 CCDC180Q9P1Z9 1646 aa36.55■■■■□ 3.44
GJB3-202ENST00000373366 ZCCHC6Q5VYS8 1495 aaKnown RBP35.66■■■■□ 3.3
GJB3-202ENST00000373366 SHROOM4Q9ULL8 1493 aa35.12■■■■□ 3.21
GJB3-202ENST00000373366 DCAF8L2P0C7V8 631 aa34.94■■■■□ 3.18
GJB3-202ENST00000373366 DCAF1Q9Y4B6 1507 aa34.92■■■■□ 3.18
GJB3-202ENST00000373366 MYO15BQ96JP2 1530 aa34.25■■■■□ 3.07
GJB3-202ENST00000373366 ABCC9O60706 1549 aa34.15■■■■□ 3.06
GJB3-202ENST00000373366 SUPT5HO00267 1087 aaKnown RBP34.11■■■■□ 3.05
GJB3-202ENST00000373366 NACADO15069 1562 aa33.92■■■■□ 3.02
GJB3-202ENST00000373366 SCRIBQ14160 1630 aa33.82■■■■□ 3
GJB3-202ENST00000373366 RB1CC1Q8TDY2 1594 aa33.51■■■□□ 2.95
GJB3-202ENST00000373366 RSF1Q96T23 1441 aaPredicted RBP33.1■■■□□ 2.89
GJB3-202ENST00000373366 CHIC1Q5VXU3 224 aa32.92■■■□□ 2.86
GJB3-202ENST00000373366 CECR2Q9BXF3 1484 aa32.89■■■□□ 2.85
GJB3-202ENST00000373366 UNC13AQ9UPW8 1703 aa32.88■■■□□ 2.85
GJB3-202ENST00000373366 MROH2BQ7Z745 1585 aa32.75■■■□□ 2.83
GJB3-202ENST00000373366 BAZ1AQ9NRL2 1556 aaPredicted RBP32.63■■■□□ 2.81
GJB3-202ENST00000373366 WIZO95785 1651 aa32.54■■■□□ 2.8
GJB3-202ENST00000373366 BICRAQ9NZM4 1560 aa32.49■■■□□ 2.79
GJB3-202ENST00000373366 SMARCA4P51532 1647 aa32.4■■■□□ 2.78
GJB3-202ENST00000373366 PABPN1Q86U42 306 aaKnown RBP eCLIP32.38■■■□□ 2.77
GJB3-202ENST00000373366 TOP2AP11388 1531 aaKnown RBP32.16■■■□□ 2.74
GJB3-202ENST00000373366 TRIM41Q8WV44 630 aa31.98■■■□□ 2.71
GJB3-202ENST00000373366 PEG3Q9GZU2 1588 aa31.93■■■□□ 2.7
GJB3-202ENST00000373366 SMARCA2P51531 1590 aa31.9■■■□□ 2.7
GJB3-202ENST00000373366 CCDC88BA6NC98 1476 aa31.88■■■□□ 2.69
GJB3-202ENST00000373366 EIF4G1Q04637 1599 aaKnown RBP31.85■■■□□ 2.69
GJB3-202ENST00000373366 LOC105371045A0A1W2PR82 267 aa31.74■■■□□ 2.67
GJB3-202ENST00000373366 ATAD2BQ9ULI0 1458 aa31.72■■■□□ 2.67
GJB3-202ENST00000373366 BAZ1BQ9UIG0 1483 aaKnown RBP31.6■■■□□ 2.65
GJB3-202ENST00000373366 FAM9AQ8IZU1 332 aaPredicted RBP31.48■■■□□ 2.63
GJB3-202ENST00000373366 ABCC8Q09428 1581 aa31.45■■■□□ 2.63
GJB3-202ENST00000373366 NCAPD3P42695 1498 aa31.32■■■□□ 2.6
GJB3-202ENST00000373366 HMGXB3Q12766 1538 aa31.31■■■□□ 2.6
GJB3-202ENST00000373366 WRNQ14191 1432 aaPredicted RBP eCLIP31.15■■■□□ 2.58
GJB3-202ENST00000373366 EHMT2Q96KQ7 1210 aa31.08■■■□□ 2.57
GJB3-202ENST00000373366 SOGA1O94964 1423 aa30.99■■■□□ 2.55
GJB3-202ENST00000373366 EEA1Q15075 1411 aa30.99■■■□□ 2.55
GJB3-202ENST00000373366 SYNJ1O43426 1573 aa30.99■■■□□ 2.55
GJB3-202ENST00000373366 PCGF6Q9BYE7 350 aa30.96■■■□□ 2.55
GJB3-202ENST00000373366 CC2D2AQ9P2K1 1620 aa30.87■■■□□ 2.53
GJB3-202ENST00000373366 RUSC2Q8N2Y8 1516 aa30.84■■■□□ 2.53
GJB3-202ENST00000373366 CSRNP3Q8WYN3 585 aa30.83■■■□□ 2.53
GJB3-202ENST00000373366 CFTRP13569 1480 aa30.81■■■□□ 2.52
GJB3-202ENST00000373366 TOP2BQ02880 1626 aa30.78■■■□□ 2.52
GJB3-202ENST00000373366 TRIM26Q12899 539 aaPredicted RBP30.75■■■□□ 2.51
GJB3-202ENST00000373366 BIVM-ERCC5R4GMW8 1640 aa30.73■■■□□ 2.51
GJB3-202ENST00000373366 PRDM2Q13029 1718 aa30.67■■■□□ 2.5
GJB3-202ENST00000373366 TNIKQ9UKE5 1360 aa30.65■■■□□ 2.5
GJB3-202ENST00000373366 GOLGA3Q08378 1498 aa30.63■■■□□ 2.49
GJB3-202ENST00000373366 CADPSQ9ULU8 1353 aa30.6■■■□□ 2.49
GJB3-202ENST00000373366 CUX1P39880 1505 aa30.58■■■□□ 2.49
GJB3-202ENST00000373366 CEP162Q5TB80 1403 aa30.56■■■□□ 2.48
GJB3-202ENST00000373366 CEP164Q9UPV0 1460 aa30.56■■■□□ 2.48
GJB3-202ENST00000373366 KIF21BO75037 1637 aa30.56■■■□□ 2.48
GJB3-202ENST00000373366 UBTFP17480 764 aaKnown RBP30.55■■■□□ 2.48
GJB3-202ENST00000373366 HRCP23327 699 aa30.53■■■□□ 2.48
GJB3-202ENST00000373366 RAPGEF2Q9Y4G8 1499 aa30.32■■■□□ 2.44
GJB3-202ENST00000373366 KIF27Q86VH2 1401 aa30.3■■■□□ 2.44
GJB3-202ENST00000373366 FANCD2Q9BXW9 1451 aa30.27■■■□□ 2.44
GJB3-202ENST00000373366 PPARGC1BQ86YN6 1023 aaKnown RBP30.25■■■□□ 2.43
GJB3-202ENST00000373366 ERICH3Q5RHP9 1530 aa30.23■■■□□ 2.43
GJB3-202ENST00000373366 PRXQ9BXM0 1461 aa30.23■■■□□ 2.43
GJB3-202ENST00000373366 CLIP1P30622 1438 aa30.18■■■□□ 2.42
GJB3-202ENST00000373366 NESP48681 1621 aa30.17■■■□□ 2.42
GJB3-202ENST00000373366 FGD5Q6ZNL6 1462 aa30.16■■■□□ 2.42
GJB3-202ENST00000373366 LAMC3Q9Y6N6 1575 aa30.15■■■□□ 2.42
GJB3-202ENST00000373366 CUX2O14529 1486 aa30.1■■■□□ 2.41
GJB3-202ENST00000373366 DNMBPQ6XZF7 1577 aa30.09■■■□□ 2.41
GJB3-202ENST00000373366 TOPBP1Q92547 1522 aa30.01■■■□□ 2.39
GJB3-202ENST00000373366 VPS8Q8N3P4 1428 aa29.98■■■□□ 2.39
GJB3-202ENST00000373366 DNAJC5BQ9UF47 199 aa29.98■■■□□ 2.39
GJB3-202ENST00000373366 IGF1RP08069 1367 aa29.97■■■□□ 2.39
GJB3-202ENST00000373366 RANGAP1P46060 587 aaPredicted RBP29.94■■■□□ 2.38
GJB3-202ENST00000373366 PDS5BQ9NTI5 1447 aa29.93■■■□□ 2.38
GJB3-202ENST00000373366 POLA1P09884 1462 aaPredicted RBP29.91■■■□□ 2.38
GJB3-202ENST00000373366 TTBK1Q5TCY1 1321 aaPredicted RBP29.9■■■□□ 2.38
GJB3-202ENST00000373366 ABCA10Q8WWZ4 1543 aa29.87■■■□□ 2.37
GJB3-202ENST00000373366 RAD54L2Q9Y4B4 1467 aa29.86■■■□□ 2.37
GJB3-202ENST00000373366 URB2Q14146 1524 aaKnown RBP29.85■■■□□ 2.37
GJB3-202ENST00000373366 CARMIL1Q5VZK9 1371 aa29.84■■■□□ 2.37
GJB3-202ENST00000373366 ZEB1P37275 1124 aaPredicted RBP29.83■■■□□ 2.37
GJB3-202ENST00000373366 APLP2Q06481 763 aa29.79■■■□□ 2.36
GJB3-202ENST00000373366 KIF21AQ7Z4S6 1674 aa29.79■■■□□ 2.36
GJB3-202ENST00000373366 ARAP1Q96P48 1450 aa29.78■■■□□ 2.36
GJB3-202ENST00000373366 WDR97A6NE52 1622 aa29.7■■■□□ 2.34
GJB3-202ENST00000373366 ARHGAP35Q9NRY4 1499 aa29.67■■■□□ 2.34
GJB3-202ENST00000373366 CUL7Q14999 1698 aa29.65■■■□□ 2.34
GJB3-202ENST00000373366 ABCA5Q8WWZ7 1642 aa29.57■■■□□ 2.32
GJB3-202ENST00000373366 TDRD9Q8NDG6 1382 aaKnown RBP29.53■■■□□ 2.32
GJB3-202ENST00000373366 GAPVD1Q14C86 1478 aa29.52■■■□□ 2.32
GJB3-202ENST00000373366 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.51■■■□□ 2.31
GJB3-202ENST00000373366 MRC2Q9UBG0 1479 aa29.5■■■□□ 2.31
GJB3-202ENST00000373366 TARBP1Q13395 1621 aaKnown RBP29.49■■■□□ 2.31
GJB3-202ENST00000373366 CCER1Q8TC90 406 aaPredicted RBP29.48■■■□□ 2.31
GJB3-202ENST00000373366 CTTNBP2Q8WZ74 1663 aa29.43■■■□□ 2.3
GJB3-202ENST00000373366 KANK4Q5T7N3 995 aaPredicted RBP29.38■■■□□ 2.29
GJB3-202ENST00000373366 EFCAB5A4FU69 1503 aa29.35■■■□□ 2.29
GJB3-202ENST00000373366 FHAD1B1AJZ9 1412 aa29.33■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms