RNA–Protein interactions for RNA: ENST00000640067.1

GABRD-213, Transcript of gamma-aminobutyric acid type A receptor delta subunit, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene GABRD, Length 1,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRD-213ENST00000640067 NISCHQ9Y2I1 1504 aa47.78■■■■■ 5.24
GABRD-213ENST00000640067 CCDC180Q9P1Z9 1646 aa42.03■■■■■ 4.32
GABRD-213ENST00000640067 ABCC9O60706 1549 aa40.38■■■■■ 4.05
GABRD-213ENST00000640067 ZCCHC6Q5VYS8 1495 aaKnown RBP39.98■■■■□ 3.99
GABRD-213ENST00000640067 DCAF8L2P0C7V8 631 aa39.61■■■■□ 3.93
GABRD-213ENST00000640067 DCAF1Q9Y4B6 1507 aa39.55■■■■□ 3.92
GABRD-213ENST00000640067 MYO15BQ96JP2 1530 aa39.4■■■■□ 3.9
GABRD-213ENST00000640067 NACADO15069 1562 aa39.34■■■■□ 3.89
GABRD-213ENST00000640067 RB1CC1Q8TDY2 1594 aa39.17■■■■□ 3.86
GABRD-213ENST00000640067 SCRIBQ14160 1630 aa38.46■■■■□ 3.75
GABRD-213ENST00000640067 SHROOM4Q9ULL8 1493 aa38.31■■■■□ 3.72
GABRD-213ENST00000640067 UNC13AQ9UPW8 1703 aa38.28■■■■□ 3.72
GABRD-213ENST00000640067 BICRAQ9NZM4 1560 aa37.99■■■■□ 3.67
GABRD-213ENST00000640067 PABPN1Q86U42 306 aaKnown RBP eCLIP37.9■■■■□ 3.66
GABRD-213ENST00000640067 CECR2Q9BXF3 1484 aa37.15■■■■□ 3.54
GABRD-213ENST00000640067 BAZ1AQ9NRL2 1556 aaPredicted RBP36.95■■■■□ 3.51
GABRD-213ENST00000640067 EIF4G1Q04637 1599 aaKnown RBP36.91■■■■□ 3.5
GABRD-213ENST00000640067 SMARCA4P51532 1647 aa36.87■■■■□ 3.49
GABRD-213ENST00000640067 MROH2BQ7Z745 1585 aa36.85■■■■□ 3.49
GABRD-213ENST00000640067 RSF1Q96T23 1441 aaPredicted RBP36.75■■■■□ 3.47
GABRD-213ENST00000640067 CC2D2AQ9P2K1 1620 aa36.54■■■■□ 3.44
GABRD-213ENST00000640067 PEG3Q9GZU2 1588 aa36.5■■■■□ 3.43
GABRD-213ENST00000640067 SUPT5HO00267 1087 aaKnown RBP36.49■■■■□ 3.43
GABRD-213ENST00000640067 WIZO95785 1651 aa36.48■■■■□ 3.43
GABRD-213ENST00000640067 ATAD2BQ9ULI0 1458 aa36.48■■■■□ 3.43
GABRD-213ENST00000640067 SMARCA2P51531 1590 aa36.44■■■■□ 3.42
GABRD-213ENST00000640067 DNAJC5BQ9UF47 199 aa36.33■■■■□ 3.41
GABRD-213ENST00000640067 NCAPD3P42695 1498 aa36.33■■■■□ 3.41
GABRD-213ENST00000640067 BAZ1BQ9UIG0 1483 aaKnown RBP36.21■■■■□ 3.39
GABRD-213ENST00000640067 HMGXB3Q12766 1538 aa36.2■■■■□ 3.39
GABRD-213ENST00000640067 TOP2AP11388 1531 aaKnown RBP36.13■■■■□ 3.37
GABRD-213ENST00000640067 CCDC88BA6NC98 1476 aa35.74■■■■□ 3.31
GABRD-213ENST00000640067 CADPSQ9ULU8 1353 aa35.32■■■■□ 3.24
GABRD-213ENST00000640067 CFTRP13569 1480 aa35.29■■■■□ 3.24
GABRD-213ENST00000640067 NESP48681 1621 aa35.21■■■■□ 3.23
GABRD-213ENST00000640067 LAMC3Q9Y6N6 1575 aa35.19■■■■□ 3.22
GABRD-213ENST00000640067 PRDM2Q13029 1718 aa35■■■■□ 3.19
GABRD-213ENST00000640067 PDS5BQ9NTI5 1447 aa34.95■■■■□ 3.18
GABRD-213ENST00000640067 FANCD2Q9BXW9 1451 aa34.9■■■■□ 3.18
GABRD-213ENST00000640067 CEP164Q9UPV0 1460 aa34.77■■■■□ 3.16
GABRD-213ENST00000640067 KIF21AQ7Z4S6 1674 aa34.76■■■■□ 3.15
GABRD-213ENST00000640067 ERCC6Q03468 1493 aa34.7■■■■□ 3.15
GABRD-213ENST00000640067 ABCC8Q09428 1581 aa34.69■■■■□ 3.14
GABRD-213ENST00000640067 WRNQ14191 1432 aaPredicted RBP eCLIP34.62■■■■□ 3.13
GABRD-213ENST00000640067 CHIC1Q5VXU3 224 aa34.57■■■■□ 3.12
GABRD-213ENST00000640067 MRC2Q9UBG0 1479 aa34.53■■■■□ 3.12
GABRD-213ENST00000640067 CUX1P39880 1505 aa34.51■■■■□ 3.12
GABRD-213ENST00000640067 URB2Q14146 1524 aaKnown RBP34.51■■■■□ 3.12
GABRD-213ENST00000640067 SYNJ1O43426 1573 aa34.47■■■■□ 3.11
GABRD-213ENST00000640067 DNMBPQ6XZF7 1577 aa34.45■■■■□ 3.11
GABRD-213ENST00000640067 TOPBP1Q92547 1522 aa34.45■■■■□ 3.1
GABRD-213ENST00000640067 THOC2Q8NI27 1593 aaKnown RBP34.45■■■■□ 3.1
GABRD-213ENST00000640067 TOP2BQ02880 1626 aa34.42■■■■□ 3.1
GABRD-213ENST00000640067 TRIM41Q8WV44 630 aa34.41■■■■□ 3.1
GABRD-213ENST00000640067 BIVM-ERCC5R4GMW8 1640 aa34.39■■■■□ 3.1
GABRD-213ENST00000640067 WDR62O43379 1518 aa34.39■■■■□ 3.1
GABRD-213ENST00000640067 FGD5Q6ZNL6 1462 aa34.26■■■■□ 3.07
GABRD-213ENST00000640067 POLA1P09884 1462 aaPredicted RBP34.22■■■■□ 3.07
GABRD-213ENST00000640067 CUX2O14529 1486 aa34.11■■■■□ 3.05
GABRD-213ENST00000640067 SOGA1O94964 1423 aa34.1■■■■□ 3.05
GABRD-213ENST00000640067 RAD54L2Q9Y4B4 1467 aa34.07■■■■□ 3.04
GABRD-213ENST00000640067 IFT140Q96RY7 1462 aa34■■■■□ 3.03
GABRD-213ENST00000640067 TARBP1Q13395 1621 aaKnown RBP33.99■■■■□ 3.03
GABRD-213ENST00000640067 ABCA10Q8WWZ4 1543 aa33.96■■■■□ 3.03
GABRD-213ENST00000640067 WDR97A6NE52 1622 aa33.89■■■■□ 3.02
GABRD-213ENST00000640067 TDRD9Q8NDG6 1382 aaKnown RBP33.82■■■■□ 3
GABRD-213ENST00000640067 RUSC2Q8N2Y8 1516 aa33.82■■■■□ 3
GABRD-213ENST00000640067 KIF27Q86VH2 1401 aa33.81■■■■□ 3
GABRD-213ENST00000640067 ZNF608Q9ULD9 1512 aaPredicted RBP33.8■■■■□ 3
GABRD-213ENST00000640067 ABCA5Q8WWZ7 1642 aa33.74■■■□□ 2.99
GABRD-213ENST00000640067 AQRO60306 1485 aaKnown RBP eCLIP33.73■■■□□ 2.99
GABRD-213ENST00000640067 EEA1Q15075 1411 aa33.73■■■□□ 2.99
GABRD-213ENST00000640067 GAPVD1Q14C86 1478 aa33.71■■■□□ 2.99
GABRD-213ENST00000640067 FAM9AQ8IZU1 332 aaPredicted RBP33.69■■■□□ 2.98
GABRD-213ENST00000640067 EIF4G3O43432 1585 aaKnown RBP33.68■■■□□ 2.98
GABRD-213ENST00000640067 IGF1RP08069 1367 aa33.6■■■□□ 2.97
GABRD-213ENST00000640067 CSRNP3Q8WYN3 585 aa33.6■■■□□ 2.97
GABRD-213ENST00000640067 GRIN2BQ13224 1484 aa33.57■■■□□ 2.96
GABRD-213ENST00000640067 ERICH3Q5RHP9 1530 aa33.56■■■□□ 2.96
GABRD-213ENST00000640067 PBRM1Q86U86 1689 aa33.53■■■□□ 2.96
GABRD-213ENST00000640067 SNAPC4Q5SXM2 1469 aa33.42■■■□□ 2.94
GABRD-213ENST00000640067 PRXQ9BXM0 1461 aa33.4■■■□□ 2.94
GABRD-213ENST00000640067 CARMIL1Q5VZK9 1371 aa33.4■■■□□ 2.94
GABRD-213ENST00000640067 CUL7Q14999 1698 aa33.39■■■□□ 2.94
GABRD-213ENST00000640067 MAGI1Q96QZ7 1491 aaPredicted RBP33.39■■■□□ 2.94
GABRD-213ENST00000640067 FHAD1B1AJZ9 1412 aa33.35■■■□□ 2.93
GABRD-213ENST00000640067 ADAMTS12P58397 1594 aa33.34■■■□□ 2.93
GABRD-213ENST00000640067 KIF21BO75037 1637 aa33.31■■■□□ 2.92
GABRD-213ENST00000640067 RAPGEF2Q9Y4G8 1499 aa33.29■■■□□ 2.92
GABRD-213ENST00000640067 SYNJ2O15056 1496 aa33.25■■■□□ 2.91
GABRD-213ENST00000640067 EHMT2Q96KQ7 1210 aa33.2■■■□□ 2.9
GABRD-213ENST00000640067 GOLGA3Q08378 1498 aa33.19■■■□□ 2.9
GABRD-213ENST00000640067 CHMP7Q8WUX9 453 aaPredicted RBP33.19■■■□□ 2.9
GABRD-213ENST00000640067 LOC105371045A0A1W2PR82 267 aa33.17■■■□□ 2.9
GABRD-213ENST00000640067 FBLN2P98095 1184 aa33.16■■■□□ 2.9
GABRD-213ENST00000640067 GRIN2AQ12879 1464 aa33.15■■■□□ 2.9
GABRD-213ENST00000640067 CHD1O14646 1710 aa33.06■■■□□ 2.88
GABRD-213ENST00000640067 UBTFP17480 764 aaKnown RBP33.06■■■□□ 2.88
GABRD-213ENST00000640067 NUP160Q12769 1436 aa32.97■■■□□ 2.87
GABRD-213ENST00000640067 TNIKQ9UKE5 1360 aa32.96■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 304.3 ms